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The map label for this gene is hupE [H]

Identifier: 15606080

GI number: 15606080

Start: 454585

End: 455127

Strand: Direct

Name: hupE [H]

Synonym: aq_666

Alternate gene names: 15606080

Gene position: 454585-455127 (Clockwise)

Preceding gene: 15606079

Following gene: 15606081

Centisome position: 29.3

GC content: 48.8

Gene sequence:

>543_bases
ATGAGGAAGTTTTTACCTTTTGTGGGGCTCGCTTCTTTTGCCTTTGCACACCCGGGACACTTTCACGGCGTAAACCCTTT
TAACTCCGGACTCATTCACCCGCTCACCGGGCTGGATCACTTGTCCGTTATGGTGGCCGTAGGACTCCTCGGCAGTTACT
ACGCAGGAAAGAAGGCGTTTCTACCCGCTCTTACGTTTGTTAGCTTCATGACGCTCGGTTCAATACTTGGACTCCTCGGA
GTTAGCGTTCCCTTCGTGGAAAGCGGGATAATTCTTTCCGTTGCTTTAATGGGAATACTTCTCTTTGCAAAGGACTTAAA
ACTCTCTTACGTACTCCCGCTTATAGGAATTTTTGGAATTCTTCATGGTGTAGCTCACGGATACGAAGCTCCCCAGACAT
TACACCCGGTTTACTACGTTCTCGGATTTGTACTCTCTACCGCAGCACTTCACTTCACCGGATTGCTTTTCGGGAAGGCT
CTTAAAGAGAAACTCGTTAGGGTATCGGGACTACTCCTCCTTGCCCTTGCCTTCCTCCTTTGA

Upstream 100 bases:

>100_bases
CGTCCACAAAAACGGAGAAGTTTCTTCTATGTTCAACGGCTCTAAGTTCTTCAAAAAAGACCCTGTTGACCTTAAAGATA
TAAAGTAAGGAGGTAAAAAA

Downstream 100 bases:

>100_bases
TACCCTTTTCCCATGATTACGGTACTCGGTATAGGGAACATACTCTTATCGGATGAAGGACTGGGAGTGAGAACGGTTGA
GGAGCTCCAGAGGAGGTACG

Product: HupE hydrogenase related function

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MRKFLPFVGLASFAFAHPGHFHGVNPFNSGLIHPLTGLDHLSVMVAVGLLGSYYAGKKAFLPALTFVSFMTLGSILGLLG
VSVPFVESGIILSVALMGILLFAKDLKLSYVLPLIGIFGILHGVAHGYEAPQTLHPVYYVLGFVLSTAALHFTGLLFGKA
LKEKLVRVSGLLLLALAFLL

Sequences:

>Translated_180_residues
MRKFLPFVGLASFAFAHPGHFHGVNPFNSGLIHPLTGLDHLSVMVAVGLLGSYYAGKKAFLPALTFVSFMTLGSILGLLG
VSVPFVESGIILSVALMGILLFAKDLKLSYVLPLIGIFGILHGVAHGYEAPQTLHPVYYVLGFVLSTAALHFTGLLFGKA
LKEKLVRVSGLLLLALAFLL
>Mature_180_residues
MRKFLPFVGLASFAFAHPGHFHGVNPFNSGLIHPLTGLDHLSVMVAVGLLGSYYAGKKAFLPALTFVSFMTLGSILGLLG
VSVPFVESGIILSVALMGILLFAKDLKLSYVLPLIGIFGILHGVAHGYEAPQTLHPVYYVLGFVLSTAALHFTGLLFGKA
LKEKLVRVSGLLLLALAFLL

Specific function: Needed for full hydrogenase activity [H]

COG id: COG2370

COG function: function code O; Hydrogenase/urease accessory protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007038 [H]

Pfam domain/function: PF04955 HupE_UreJ [H]

EC number: NA

Molecular weight: Translated: 19174; Mature: 19174

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKFLPFVGLASFAFAHPGHFHGVNPFNSGLIHPLTGLDHLSVMVAVGLLGSYYAGKKAF
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHCCHHHH
LPALTFVSFMTLGSILGLLGVSVPFVESGIILSVALMGILLFAKDLKLSYVLPLIGIFGI
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHGVAHGYEAPQTLHPVYYVLGFVLSTAALHFTGLLFGKALKEKLVRVSGLLLLALAFLL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MRKFLPFVGLASFAFAHPGHFHGVNPFNSGLIHPLTGLDHLSVMVAVGLLGSYYAGKKAF
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHCCHHHH
LPALTFVSFMTLGSILGLLGVSVPFVESGIILSVALMGILLFAKDLKLSYVLPLIGIFGI
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHGVAHGYEAPQTLHPVYYVLGFVLSTAALHFTGLLFGKALKEKLVRVSGLLLLALAFLL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597428 [H]