| Definition | Aquifex aeolicus VF5, complete genome. |
|---|---|
| Accession | NC_000918 |
| Length | 1,551,335 |
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The map label for this gene is mbhL1 [H]
Identifier: 15606078
GI number: 15606078
Start: 451992
End: 453893
Strand: Direct
Name: mbhL1 [H]
Synonym: aq_662
Alternate gene names: 15606078
Gene position: 451992-453893 (Clockwise)
Preceding gene: 15606077
Following gene: 15606079
Centisome position: 29.14
GC content: 49.05
Gene sequence:
>1902_bases ATGAAGAGAGTTGTAGTTGATCCTGTAACAAGGATAGAAGGTCATTTGAGAATTGAGATAATGGTTGACGAGGAAACAGG ACAAGTGAAAGACGCCCTCTCCGCCGGAACTATGTGGAGGGGGATTGAACTCATAGTGAGAAACAGGGACCCGAGAGACG TATGGGCATTTACCCAGAGAATATGCGGAGTTTGCACGTCCATACACGCCCTCGCATCACTGAGAGCTGTAGAAGACGCA CTTGAGATAACTATTCCCAAAAACGCAAACTACATAAGGAATATAATGTACGGTTCACTTCAGGTTCACGACCACGTGGT TCACTTTTACCACCTCCATGCACTCGACTGGGTTTCTCCTGTAGAAGCCCTGAAGGCGGACCCCGTCGCCACAGCGGCAC TTGCAAACAAAATCCTTGAAAAGTACGGTGTTCTGAACGAATTTATGCCCGACTTTTTAGGCCACAGGGCTTACCCCAAA AAGTTCCCCAAAGCCACTCCCGGTTACTTCAGGGAGTTTCAGAAGAAGATAAAGAAGCTCGTTGAGAGCGGACAGCTCGG AATATTTGCCGCACACTGGTGGGATCACCCAGATTACCAGATGCTCCCGCCGGAAGTTCACCTCATAGGAATAGCCCACT ACCTAAACATGCTTGACGTCCAGAGAGAACTCTTTATACCTCAGGTGGTGTTCGGCGGAAAGAACCCCCACCCCCACTAC ATAGTTGGAGGAGTTAACTGTTCAATCTCCATGGACGATATGAACGCACCCGTAAACGCGGAAAGACTCGCGGTCGTAGA AGACGCTATATACACTCAGGTAGAGTCCACAGACTTTTTCTACATTCCCGACATTCTCGCAATCGCCGATATATACCTCA ATCAACATAACTGGTTCTACGGCGGTGGACTTTCCAAGAAGAGGGTAATAGGATACGGAGACTATCCCGATGAGCCCTAC ACGGGCATAAAGAACGGGGATTACCACAAGAAGATACTGTGGCACTCAAACGGAGTCGTTGAAGACTTTTACAAGGGTGT GGAAAAGGCCAAGTTCTACAACCTAGAAGGAAAGGACTTTACGGATCCAGAGCAAATTCAGGAGTTCGTCACCCACTCCT GGTATAAGTATCCCGACGAAACGAAGGGACTTCACCCCTGGGATGGAATAACCGAGCCGAATTACACCGGACCGAAGGAA GGAACGAAAACCCACTGGAAGTACCTTGACGAAAACGGAAAGTACTCTTGGATAAAAGCTCCGAGATGGAGAGGAAAGGC CTGTGAAGTAGGACCTCTGGCAAGGTACATAATCGTCTACACAAAAGTAAAGCAGGGACACATAAAACCCACCTGGGTAG ACGAACTCATAGTCAATCAAATAGACACCGTGTCCAAGATATTGAACCTCCCTCCCGAAAAGTGGCTGCCCACTACGGTC GGAAGGACAATCGCGAGGGCACTGGAAGCCCAGATGTCAGCACATACAAACCTCTACTGGATGAAGAAACTCTATGACAA CATAAAGGCGGGAGACACGAGCGTGGCAAACATGGAAAAGTGGGACCCCTCCACATGGCCAAAAGAGGCAAAGGGAGTGG GATTGACGGAAGCCCCGAGAGGTGCTCTCGGACACTGGGTGATAATAAAAGACGGAAAAGTGGCGAATTATCAGTGCGTT GTTCCAACCACATGGAACGGTTCTCCCAAGGACCCGAAGGGACAGCACGGAGCATTTGAAGAGTCAATGATTGACACGAA GGTAAAGGTTCCCGAAAAGCCCCTTGAAGTTCTCAGAGGTATTCACTCATTTGACCCGTGCCTTGCATGTTCAACGCACC TCTACAACGAAAAGGGAGAAGAGATAGCCAGCGTAAGGGTTCAGGGGGTGGTTCATGTTTAA
Upstream 100 bases:
>100_bases CTATTGCGGCGGCAGCTGCTGCAGGCGGTGCAATAATTCACGGTATAGCTTCCAAGATAAGAAAGTCAGGTGAAAAGGAA GAATAAGGGAGGTGTTATAG
Downstream 100 bases:
>100_bases GAGGATTTTTATATTCAGCGCTTCCTTGAGGATATGGCACTGGATAAACTTCCTCACCATAATGGTCTTATTTTTTACGG GACTCTACATAGGGACGCCT
Product: hydrogenase large subunit
Products: NA
Alternate protein names: Hydrogenlyase; Membrane-bound hydrogenase large subunit [H]
Number of amino acids: Translated: 633; Mature: 633
Protein sequence:
>633_residues MKRVVVDPVTRIEGHLRIEIMVDEETGQVKDALSAGTMWRGIELIVRNRDPRDVWAFTQRICGVCTSIHALASLRAVEDA LEITIPKNANYIRNIMYGSLQVHDHVVHFYHLHALDWVSPVEALKADPVATAALANKILEKYGVLNEFMPDFLGHRAYPK KFPKATPGYFREFQKKIKKLVESGQLGIFAAHWWDHPDYQMLPPEVHLIGIAHYLNMLDVQRELFIPQVVFGGKNPHPHY IVGGVNCSISMDDMNAPVNAERLAVVEDAIYTQVESTDFFYIPDILAIADIYLNQHNWFYGGGLSKKRVIGYGDYPDEPY TGIKNGDYHKKILWHSNGVVEDFYKGVEKAKFYNLEGKDFTDPEQIQEFVTHSWYKYPDETKGLHPWDGITEPNYTGPKE GTKTHWKYLDENGKYSWIKAPRWRGKACEVGPLARYIIVYTKVKQGHIKPTWVDELIVNQIDTVSKILNLPPEKWLPTTV GRTIARALEAQMSAHTNLYWMKKLYDNIKAGDTSVANMEKWDPSTWPKEAKGVGLTEAPRGALGHWVIIKDGKVANYQCV VPTTWNGSPKDPKGQHGAFEESMIDTKVKVPEKPLEVLRGIHSFDPCLACSTHLYNEKGEEIASVRVQGVVHV
Sequences:
>Translated_633_residues MKRVVVDPVTRIEGHLRIEIMVDEETGQVKDALSAGTMWRGIELIVRNRDPRDVWAFTQRICGVCTSIHALASLRAVEDA LEITIPKNANYIRNIMYGSLQVHDHVVHFYHLHALDWVSPVEALKADPVATAALANKILEKYGVLNEFMPDFLGHRAYPK KFPKATPGYFREFQKKIKKLVESGQLGIFAAHWWDHPDYQMLPPEVHLIGIAHYLNMLDVQRELFIPQVVFGGKNPHPHY IVGGVNCSISMDDMNAPVNAERLAVVEDAIYTQVESTDFFYIPDILAIADIYLNQHNWFYGGGLSKKRVIGYGDYPDEPY TGIKNGDYHKKILWHSNGVVEDFYKGVEKAKFYNLEGKDFTDPEQIQEFVTHSWYKYPDETKGLHPWDGITEPNYTGPKE GTKTHWKYLDENGKYSWIKAPRWRGKACEVGPLARYIIVYTKVKQGHIKPTWVDELIVNQIDTVSKILNLPPEKWLPTTV GRTIARALEAQMSAHTNLYWMKKLYDNIKAGDTSVANMEKWDPSTWPKEAKGVGLTEAPRGALGHWVIIKDGKVANYQCV VPTTWNGSPKDPKGQHGAFEESMIDTKVKVPEKPLEVLRGIHSFDPCLACSTHLYNEKGEEIASVRVQGVVHV >Mature_633_residues MKRVVVDPVTRIEGHLRIEIMVDEETGQVKDALSAGTMWRGIELIVRNRDPRDVWAFTQRICGVCTSIHALASLRAVEDA LEITIPKNANYIRNIMYGSLQVHDHVVHFYHLHALDWVSPVEALKADPVATAALANKILEKYGVLNEFMPDFLGHRAYPK KFPKATPGYFREFQKKIKKLVESGQLGIFAAHWWDHPDYQMLPPEVHLIGIAHYLNMLDVQRELFIPQVVFGGKNPHPHY IVGGVNCSISMDDMNAPVNAERLAVVEDAIYTQVESTDFFYIPDILAIADIYLNQHNWFYGGGLSKKRVIGYGDYPDEPY TGIKNGDYHKKILWHSNGVVEDFYKGVEKAKFYNLEGKDFTDPEQIQEFVTHSWYKYPDETKGLHPWDGITEPNYTGPKE GTKTHWKYLDENGKYSWIKAPRWRGKACEVGPLARYIIVYTKVKQGHIKPTWVDELIVNQIDTVSKILNLPPEKWLPTTV GRTIARALEAQMSAHTNLYWMKKLYDNIKAGDTSVANMEKWDPSTWPKEAKGVGLTEAPRGALGHWVIIKDGKVANYQCV VPTTWNGSPKDPKGQHGAFEESMIDTKVKVPEKPLEVLRGIHSFDPCLACSTHLYNEKGEEIASVRVQGVVHV
Specific function: This enzyme recycles the H(2) produced by nitrogenase to increase the production of ATP and to protect nitrogenase against inhibition or damage by O(2) under carbon- or phosphate-limited conditions [H]
COG id: COG0374
COG function: function code C; Ni,Fe-hydrogenase I large subunit
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family [H]
Homologues:
Organism=Escherichia coli, GI1787207, Length=630, Percent_Identity=48.5714285714286, Blast_Score=602, Evalue=1e-173, Organism=Escherichia coli, GI1789368, Length=632, Percent_Identity=40.1898734177215, Blast_Score=400, Evalue=1e-112,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001501 - InterPro: IPR018194 [H]
Pfam domain/function: PF00374 NiFeSe_Hases [H]
EC number: =1.12.99.6 [H]
Molecular weight: Translated: 71966; Mature: 71966
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: PS00507 NI_HGENASE_L_1 ; PS00508 NI_HGENASE_L_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRVVVDPVTRIEGHLRIEIMVDEETGQVKDALSAGTMWRGIELIVRNRDPRDVWAFTQR CCCEEECCHHHCCCEEEEEEEEECCCCHHHHHHHHCCHHHCEEEEEECCCCHHHHHHHHH ICGVCTSIHALASLRAVEDALEITIPKNANYIRNIMYGSLQVHDHVVHFYHLHALDWVSP HHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCEEHHHHHHHHHHHHHHHHHCH VEALKADPVATAALANKILEKYGVLNEFMPDFLGHRAYPKKFPKATPGYFREFQKKIKKL HHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHHH VESGQLGIFAAHWWDHPDYQMLPPEVHLIGIAHYLNMLDVQRELFIPQVVFGGKNPHPHY HHCCCCEEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCHHEECCCCCCCCE IVGGVNCSISMDDMNAPVNAERLAVVEDAIYTQVESTDFFYIPDILAIADIYLNQHNWFY EEECEEEEEEECCCCCCCCHHHHHHHHHHHHHEECCCCEEECCHHHHHHHHHCCCCCEEE GGGLSKKRVIGYGDYPDEPYTGIKNGDYHKKILWHSNGVVEDFYKGVEKAKFYNLEGKDF CCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHEEECCCCCCC TDPEQIQEFVTHSWYKYPDETKGLHPWDGITEPNYTGPKEGTKTHWKYLDENGKYSWIKA CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEECCCCCEEEEEC PRWRGKACEVGPLARYIIVYTKVKQGHIKPTWVDELIVNQIDTVSKILNLPPEKWLPTTV CCCCCCCCCCCHHEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH GRTIARALEAQMSAHTNLYWMKKLYDNIKAGDTSVANMEKWDPSTWPKEAKGVGLTEAPR HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCC GALGHWVIIKDGKVANYQCVVPTTWNGSPKDPKGQHGAFEESMIDTKVKVPEKPLEVLRG CCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHH IHSFDPCLACSTHLYNEKGEEIASVRVQGVVHV HHCCCHHHHHHHHHHCCCCHHHHHEEEEEEEEC >Mature Secondary Structure MKRVVVDPVTRIEGHLRIEIMVDEETGQVKDALSAGTMWRGIELIVRNRDPRDVWAFTQR CCCEEECCHHHCCCEEEEEEEEECCCCHHHHHHHHCCHHHCEEEEEECCCCHHHHHHHHH ICGVCTSIHALASLRAVEDALEITIPKNANYIRNIMYGSLQVHDHVVHFYHLHALDWVSP HHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCEEHHHHHHHHHHHHHHHHHCH VEALKADPVATAALANKILEKYGVLNEFMPDFLGHRAYPKKFPKATPGYFREFQKKIKKL HHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHHH VESGQLGIFAAHWWDHPDYQMLPPEVHLIGIAHYLNMLDVQRELFIPQVVFGGKNPHPHY HHCCCCEEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCHHEECCCCCCCCE IVGGVNCSISMDDMNAPVNAERLAVVEDAIYTQVESTDFFYIPDILAIADIYLNQHNWFY EEECEEEEEEECCCCCCCCHHHHHHHHHHHHHEECCCCEEECCHHHHHHHHHCCCCCEEE GGGLSKKRVIGYGDYPDEPYTGIKNGDYHKKILWHSNGVVEDFYKGVEKAKFYNLEGKDF CCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHEEECCCCCCC TDPEQIQEFVTHSWYKYPDETKGLHPWDGITEPNYTGPKEGTKTHWKYLDENGKYSWIKA CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEECCCCCEEEEEC PRWRGKACEVGPLARYIIVYTKVKQGHIKPTWVDELIVNQIDTVSKILNLPPEKWLPTTV CCCCCCCCCCCHHEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH GRTIARALEAQMSAHTNLYWMKKLYDNIKAGDTSVANMEKWDPSTWPKEAKGVGLTEAPR HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCC GALGHWVIIKDGKVANYQCVVPTTWNGSPKDPKGQHGAFEESMIDTKVKVPEKPLEVLRG CCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHH IHSFDPCLACSTHLYNEKGEEIASVRVQGVVHV HHCCCHHHHHHHHHHCCCCHHHHHEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2402452; 2103457 [H]