Click here to switch to the map view.

The map label for this gene is acrR [C]

Identifier: 15605841

GI number: 15605841

Start: 208049

End: 208645

Strand: Direct

Name: acrR [C]

Synonym: aq_321

Alternate gene names: 15605841

Gene position: 208049-208645 (Clockwise)

Preceding gene: 15605840

Following gene: 15605844

Centisome position: 13.41

GC content: 40.87

Gene sequence:

>597_bases
ATGTCCAAACTCAAGACTGAAAAAGAGTTGAAGAAACGGGAAATAATGAGGGTAGCCTGTAAACTCTTTGCCCAGAAAGG
CTATCACAACACCACTATGCCAGATATAGCTAAAGCATTAGGTATGAGTGTTGGAAACCTCTACAACTACTTCTCCTCAA
AAGAAGAACTGGCAAAGGAGATAATGCTCTTTACCTCTAAACTCGTGGGGGAAAGATTGAGAAAGGTAAACGAGAGTAAT
CTGGATTTCAAGGAAAAGACAAAGCTTCTCGTCAAGAGCTTTTTACAAATAGCCCTCGAAGAACCCGAACTCATAAATTA
CTTCCTGAAAGTTTACCTCGTAAATACGGAAGTTTTTAAAGATGATTGTAAAGGTTTTGCGTGCGTCAGTGACGTGGTAA
CGGAAGTTATGATATTTGTGAGTGACGGGGTTGAAAAGGGCATTTTCAGGAATCAGGACTTCTTCACAGCCTTTGTAACC
ATTATGGGTCCTCTTGGGGGTATAGTATTTCTCCACAACGAAGGACTCCTCGAGAAACCCCTTCTTGAATACGCCGAAGA
ACTTGCACAGAATATATGGAACGCTTTAAAAGCTTAA

Upstream 100 bases:

>100_bases
GTTCACGTAAAGCACATAAGAGACAAGCTCGGAAAGTATAAGGGTCTTATAAAAACTGTGAGGGGTGTCGGATACAAGTT
CGAAAATTAAACTTTTATTT

Downstream 100 bases:

>100_bases
CAAATCTTATCAAAAGCCTGTTTTTCTAAAAATCCTACAAGGTGTTTAAACTTCCTATCCTTTTTCTTCTCCTCCTCCAC
GGACCTTATGGCGTGTATGA

Product: hypothetical protein

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; TetR Transcription Regulator; Transcriptional Regulator; Transcriptional Regulator Tetr Family

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MSKLKTEKELKKREIMRVACKLFAQKGYHNTTMPDIAKALGMSVGNLYNYFSSKEELAKEIMLFTSKLVGERLRKVNESN
LDFKEKTKLLVKSFLQIALEEPELINYFLKVYLVNTEVFKDDCKGFACVSDVVTEVMIFVSDGVEKGIFRNQDFFTAFVT
IMGPLGGIVFLHNEGLLEKPLLEYAEELAQNIWNALKA

Sequences:

>Translated_198_residues
MSKLKTEKELKKREIMRVACKLFAQKGYHNTTMPDIAKALGMSVGNLYNYFSSKEELAKEIMLFTSKLVGERLRKVNESN
LDFKEKTKLLVKSFLQIALEEPELINYFLKVYLVNTEVFKDDCKGFACVSDVVTEVMIFVSDGVEKGIFRNQDFFTAFVT
IMGPLGGIVFLHNEGLLEKPLLEYAEELAQNIWNALKA
>Mature_197_residues
SKLKTEKELKKREIMRVACKLFAQKGYHNTTMPDIAKALGMSVGNLYNYFSSKEELAKEIMLFTSKLVGERLRKVNESNL
DFKEKTKLLVKSFLQIALEEPELINYFLKVYLVNTEVFKDDCKGFACVSDVVTEVMIFVSDGVEKGIFRNQDFFTAFVTI
MGPLGGIVFLHNEGLLEKPLLEYAEELAQNIWNALKA

Specific function: Potential Regulator Protein For The Acrab Genes. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22612; Mature: 22481

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLKTEKELKKREIMRVACKLFAQKGYHNTTMPDIAKALGMSVGNLYNYFSSKEELAKE
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
IMLFTSKLVGERLRKVNESNLDFKEKTKLLVKSFLQIALEEPELINYFLKVYLVNTEVFK
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
DDCKGFACVSDVVTEVMIFVSDGVEKGIFRNQDFFTAFVTIMGPLGGIVFLHNEGLLEKP
HHHCHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHCCEEEEECCCCHHHH
LLEYAEELAQNIWNALKA
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKLKTEKELKKREIMRVACKLFAQKGYHNTTMPDIAKALGMSVGNLYNYFSSKEELAKE
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
IMLFTSKLVGERLRKVNESNLDFKEKTKLLVKSFLQIALEEPELINYFLKVYLVNTEVFK
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
DDCKGFACVSDVVTEVMIFVSDGVEKGIFRNQDFFTAFVTIMGPLGGIVFLHNEGLLEKP
HHHCHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHCCEEEEECCCCHHHH
LLEYAEELAQNIWNALKA
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA