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The map label for this gene is soxF

Identifier: 15605782

GI number: 15605782

Start: 145595

End: 146311

Strand: Direct

Name: soxF

Synonym: aq_234

Alternate gene names: NA

Gene position: 145595-146311 (Clockwise)

Preceding gene: 15605781

Following gene: 15605783

Centisome position: 9.39

GC content: 45.33

Gene sequence:

>717_bases
ATGGACAGAAGAACCTTCGTAAAAGCCTGCGGGTCAGTTGCCACACTTTCCCTTATCTCTTCCTCCTTTTTTACTCAAAC
CTTAAGAGCACAAACCAACGAGTTCAAAAAGTACAAAAAGGCTATTCTGCTGAACAAAGATGGAAATCCGATAAAGCCGG
AGGAGATAGAAGTCGGAAAGCAGTACTTGTTTTTCTACCCTTACCGCTCAACGCCTGCCTTTTTGCTCAACCTCGGAAAG
GAAGTAAAGCCTGTGGAAGTAAAGCTCTTAGACGGGAGTTCCTACCTCTGGCCCGGAGGCGTAGGTCCTCAAAAAAGCAT
TATCGCTTTCTGTGCTATATGTCCACATCAACTCAGTTATCCGACTCCCGATTATTCTTTCATTAATTACTATCCGCCCG
ACAAGCCCTCAAAAGCGGCAAAAAAAGGAAACGTCATTCAGTGCTGTGCCCACATGTCCATCTTTGACCCCGAAAAGGGA
GGAGTTGTACTGGACGGTCCCGCGGAATACCCCTTACTTACGATAGTCCTTTCATACGAGGATGGAAAACTTTACGCGGT
CGGGACGCTCGGTGTGGAGAAGTTTTCAGATTTCTTTGATGCCTACCGCTCTGAGCTTAAGAAAATGTACAAATCCTTCA
GAAAGGCAAAGAAGAAGGTGGATAAATCTGTTGTTATGAGGGTGGAGGAGTACGTAAATGAAGTCATTTACTGTTGA

Upstream 100 bases:

>100_bases
GAAGGTTAACGTAGAAAACGAGCGTTCTCAAAGACTCGCAAGGGCTACATTTGAATGGGCTAAAGCCATGTACAGGGATA
TGTTCTCGTGAGGTAAGGAA

Downstream 100 bases:

>100_bases
CAGAAGGAATTTACTGCTTGCAGGTGGAATTGGACTTTTGGGTGTTTACGTTTCAAAGAGTCTTGTCTTTGGAGAGACTA
AGGGAAACAGGGTTGTGGTT

Product: Rieske-I iron sulfur protein

Products: NA

Alternate protein names: Rieske Fe-S Protein; Rieske Iron-Sulfur Protein; Rieske-I Iron Sulfur Protein; Rieske Domain Protein; Rieske Iron-Sulfur Domain-Containing Protein; Rieske Iron-Sulphur Domain Protein; Sulfur Oxidation Protein Rieske-I Iron Sulfur Protein SoxL; Rieske Iron-Sulfur; Rieske Iron-Sulfur Domain

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MDRRTFVKACGSVATLSLISSSFFTQTLRAQTNEFKKYKKAILLNKDGNPIKPEEIEVGKQYLFFYPYRSTPAFLLNLGK
EVKPVEVKLLDGSSYLWPGGVGPQKSIIAFCAICPHQLSYPTPDYSFINYYPPDKPSKAAKKGNVIQCCAHMSIFDPEKG
GVVLDGPAEYPLLTIVLSYEDGKLYAVGTLGVEKFSDFFDAYRSELKKMYKSFRKAKKKVDKSVVMRVEEYVNEVIYC

Sequences:

>Translated_238_residues
MDRRTFVKACGSVATLSLISSSFFTQTLRAQTNEFKKYKKAILLNKDGNPIKPEEIEVGKQYLFFYPYRSTPAFLLNLGK
EVKPVEVKLLDGSSYLWPGGVGPQKSIIAFCAICPHQLSYPTPDYSFINYYPPDKPSKAAKKGNVIQCCAHMSIFDPEKG
GVVLDGPAEYPLLTIVLSYEDGKLYAVGTLGVEKFSDFFDAYRSELKKMYKSFRKAKKKVDKSVVMRVEEYVNEVIYC
>Mature_238_residues
MDRRTFVKACGSVATLSLISSSFFTQTLRAQTNEFKKYKKAILLNKDGNPIKPEEIEVGKQYLFFYPYRSTPAFLLNLGK
EVKPVEVKLLDGSSYLWPGGVGPQKSIIAFCAICPHQLSYPTPDYSFINYYPPDKPSKAAKKGNVIQCCAHMSIFDPEKG
GVVLDGPAEYPLLTIVLSYEDGKLYAVGTLGVEKFSDFFDAYRSELKKMYKSFRKAKKKVDKSVVMRVEEYVNEVIYC

Specific function: Unknown

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26875; Mature: 26875

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRRTFVKACGSVATLSLISSSFFTQTLRAQTNEFKKYKKAILLNKDGNPIKPEEIEVGK
CCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHCCC
QYLFFYPYRSTPAFLLNLGKEVKPVEVKLLDGSSYLWPGGVGPQKSIIAFCAICPHQLSY
EEEEEEECCCCHHHHHHCCCCCCCEEEEEECCCCEECCCCCCCHHHHHHHHHHCCHHCCC
PTPDYSFINYYPPDKPSKAAKKGNVIQCCAHMSIFDPEKGGVVLDGPAEYPLLTIVLSYE
CCCCCCEEECCCCCCCHHHHHCCCCEEHHHHCCCCCCCCCCEEEECCCCCCEEEEEEEEC
DGKLYAVGTLGVEKFSDFFDAYRSELKKMYKSFRKAKKKVDKSVVMRVEEYVNEVIYC
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDRRTFVKACGSVATLSLISSSFFTQTLRAQTNEFKKYKKAILLNKDGNPIKPEEIEVGK
CCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHCCC
QYLFFYPYRSTPAFLLNLGKEVKPVEVKLLDGSSYLWPGGVGPQKSIIAFCAICPHQLSY
EEEEEEECCCCHHHHHHCCCCCCCEEEEEECCCCEECCCCCCCHHHHHHHHHHCCHHCCC
PTPDYSFINYYPPDKPSKAAKKGNVIQCCAHMSIFDPEKGGVVLDGPAEYPLLTIVLSYE
CCCCCCEEECCCCCCCHHHHHCCCCEEHHHHCCCCCCCCCCEEEECCCCCCEEEEEEEEC
DGKLYAVGTLGVEKFSDFFDAYRSELKKMYKSFRKAKKKVDKSVVMRVEEYVNEVIYC
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA