Definition Aquifex aeolicus VF5, complete genome.
Accession NC_000918
Length 1,551,335

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The map label for this gene is 15605648

Identifier: 15605648

GI number: 15605648

Start: 30475

End: 33036

Strand: Direct

Name: 15605648

Synonym: aq_050

Alternate gene names: NA

Gene position: 30475-33036 (Clockwise)

Preceding gene: 15605647

Following gene: 15605652

Centisome position: 1.96

GC content: 35.6

Gene sequence:

>2562_bases
TTGATATTTTTCCTTTTTCTCATATTTTCTCTATCCTTTGGCTTTGAAGTTTATATAAAGTCTAACTATCCATTAAAAAA
GGACAATCTGCGTCATGTAATAAACGAGAAGAATTACGCGAAAATCCTGGAAATGCTTAAGCAAATTCCCGAAATAAGGG
AAGTAAGGTATGAAAAACGAAAGGACAAGCTCTTAATTTACGTGGAAAGGTATCCCATAATCAAAGAGATAAAAATAAAG
GGGAACGTTTTTCTGAGAGATGAAGATGTGAAAAACGTTCTTGGAATAGAAGAGGGCATTCCGTTAATAGAGGATAATCC
AAAAACTTACGAGGAAATTCTTGAAAAGTATTATAAAGAAATCGGTTTTTTAAATGCAGATACCAAAGTGAACATAAGTT
TAGACGATAAAGGAAACGCTATTTTCTACATAAATATTCGCGAGGGGAACCTTTATTTTCTCGAAGATATCCAGTTTGAA
GGTGTTAAAAAGCTACAAAAAAAAGAACTGATAAAAGCCTCTGGACTTGTAATAGGGAGTATTTTTGATATAGATAAAGT
AGAAGACGCAGAGGAGAATTTAGAAAACTTCTACAGAAAAAAAGGTTTTTTTGAGAGTTTCGTTTATCTGAAAGGTATAA
AAAAAGAAAAATTAAAGAGAAAGTTTAGGGAAGCACTTTTCCCCGAAACGGATTCATTTTTAAAAAGCCTTTCAATCGGT
TTAAAAAATCTCGTGAACCACCCGCTGGCTACGCTTAAGGCTTTAATCGGAAAAGGTAAGGTAGGCATTCCCGTTTATGA
GGTATACGAAGGAGAAAGGTATGAACTGAAGTTCCTTGGAAATAAGTTTTTTTCGGATGAATACCTGTATTCTCTCTTTG
ATATAAATACCGTGGGTGTAGACATACTGGTTCTTGAAGGTTTTAAAGATAAAATAGAGGAAGAGTACAGGAAAAAGGGC
TTCTTTGACGTAAATGTAGAGTACGAACTTGAAGATCACAGGATTTTGATAAAGATAAAAGAAGGAGAAAGGTATAAAGC
TAAGGTTTACATAAACGGGAAAAAAATAGAAATTCCTTACGATGAAGAGAAAATTCAAGACTTAATAAGTAAAGAAATCC
AATACTTGGAAAAAATGGGTTACGTTACGGCAACATATGAACTTAAAAAGAAAATAAACAAAGATAAAAAAGAAGTGAAC
GTTCACGTAAAAATCAACAAAGGAATGCGCTACATTGTTTGGAGCTTTAAAATAGAAAGTGAACTTTTCGAGGATTTAAA
TGAAAAAATTTCACTTAAATTCCCGAAAGCCTTGGATTACGAAACTTTAGACGAGATTTACAAGGAAATAAATAAAAGGT
TACGGGAAAAAGGATACTTTGACGCTAAGGTTTTCACAGATATAAGAATGCAAAAGGTAAAAGATGCTCTTTTGATGTTT
TATAAAGTAAAAGTAATTCCAGGAGAAAGATACGAGTACGGAGATACACTAATTTACGGTCTTGAGAAGACAAGGTTAAA
GGAAGCTGAGTACGTTCTGGAGAAAGAAAAGTACTTCTCAAAGGAAGTTGAAGAGAGAAGTGTATGGAACGCCATAGAAA
GCGAAATCTTTAAAAGTTTAAGACTTGAAGATTACGTAGACAGGGAGAGTAAGAAAGTTCACAGACTTGCCTACTTTCAG
GAGAAAAAGAGAGGGGTAATCGGACTTTCTGCGGGCTTTAACACCTTTGAAGGTTTTAAACTTTCAGCAGAACTAAGTCT
GAGAAACCTCTTGGGAATAGGGCTTATAAACACAAATACCTTTTCCATAAGTGAGAAGTACGAACTCTACAGGGTAAGCT
TCAAAGACAATTTTCTCTTTTCAAGGAGATTTTTCGGGGAAACGTCACTATTTAAGGATTACGAAGAGCATGACACGTAC
GAATTATTTACGGAAGGCTTTGCCTTCTCTCTGGGATACAGGTTAAAACCCTTTACCTTTGTGGGTATTTCCTTCTCAAA
CTTTGAGGCAAAGACCACAGGTGCGGAAAGGGACAAGGGAACTTACAGGAAATTGGGGCTGAGTTTTTCGGTAAAGGAAA
GGTTTAGACTGGTACTTTTTAGGGGATACGGACACAGGAATTATTCAAAGATAGAACTTGAAGGAAAAATAAAGAAAGAA
TTTTTTGAAAAATTCGGTTCAAGGCTGAAATTTTCTTACGGATATGCTACGAAAAAAGCACCAATATTTGAAAGATTTTT
CCTCGGAGGATATAAGAGAATGAAGGGTTACACCTACGAGAGTATAGGTTCTCCCTTGGGCGGGAGACAAATGCTTTATA
TTTCTCCCGAGATTTACTACCTTCTCAACAGAAACTTGGAACTCATAACATTCCTTGAGCTCGGAAAGGTAGAGAATAAA
TTTCCGAGTCTTTACAAAAATATGAAAAAGGACATAGGCTTTTCCGCAGGTTTTAGAACGCCCGTGGGCCTTATAAGGGG
TGATATAGCCTATCCCTTGGAAGATTTTAAGGTAAAGCCCTCGAGGCTTAAGTTTTACCTCTCGGTAGAGTTTTTCTTCT
AA

Upstream 100 bases:

>100_bases
TAAAGGTTAAACTCACCACTCACGAAGCTGGCGGGATAACGGAAAGAGATATTAAATTAGCAAAATCCATAGACGAGTTG
GTGAAAGAAATACTAAAGCA

Downstream 100 bases:

>100_bases
AGGTAGTAATCAATAAGCACCACAATAAAGAAAATTACACTTATCCAGCCGTTTACCGTAAAGAAGGCTTTGTTTATTTT
TGACAAATCCCATGGTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Protein

Number of amino acids: Translated: 853; Mature: 853

Protein sequence:

>853_residues
MIFFLFLIFSLSFGFEVYIKSNYPLKKDNLRHVINEKNYAKILEMLKQIPEIREVRYEKRKDKLLIYVERYPIIKEIKIK
GNVFLRDEDVKNVLGIEEGIPLIEDNPKTYEEILEKYYKEIGFLNADTKVNISLDDKGNAIFYINIREGNLYFLEDIQFE
GVKKLQKKELIKASGLVIGSIFDIDKVEDAEENLENFYRKKGFFESFVYLKGIKKEKLKRKFREALFPETDSFLKSLSIG
LKNLVNHPLATLKALIGKGKVGIPVYEVYEGERYELKFLGNKFFSDEYLYSLFDINTVGVDILVLEGFKDKIEEEYRKKG
FFDVNVEYELEDHRILIKIKEGERYKAKVYINGKKIEIPYDEEKIQDLISKEIQYLEKMGYVTATYELKKKINKDKKEVN
VHVKINKGMRYIVWSFKIESELFEDLNEKISLKFPKALDYETLDEIYKEINKRLREKGYFDAKVFTDIRMQKVKDALLMF
YKVKVIPGERYEYGDTLIYGLEKTRLKEAEYVLEKEKYFSKEVEERSVWNAIESEIFKSLRLEDYVDRESKKVHRLAYFQ
EKKRGVIGLSAGFNTFEGFKLSAELSLRNLLGIGLINTNTFSISEKYELYRVSFKDNFLFSRRFFGETSLFKDYEEHDTY
ELFTEGFAFSLGYRLKPFTFVGISFSNFEAKTTGAERDKGTYRKLGLSFSVKERFRLVLFRGYGHRNYSKIELEGKIKKE
FFEKFGSRLKFSYGYATKKAPIFERFFLGGYKRMKGYTYESIGSPLGGRQMLYISPEIYYLLNRNLELITFLELGKVENK
FPSLYKNMKKDIGFSAGFRTPVGLIRGDIAYPLEDFKVKPSRLKFYLSVEFFF

Sequences:

>Translated_853_residues
MIFFLFLIFSLSFGFEVYIKSNYPLKKDNLRHVINEKNYAKILEMLKQIPEIREVRYEKRKDKLLIYVERYPIIKEIKIK
GNVFLRDEDVKNVLGIEEGIPLIEDNPKTYEEILEKYYKEIGFLNADTKVNISLDDKGNAIFYINIREGNLYFLEDIQFE
GVKKLQKKELIKASGLVIGSIFDIDKVEDAEENLENFYRKKGFFESFVYLKGIKKEKLKRKFREALFPETDSFLKSLSIG
LKNLVNHPLATLKALIGKGKVGIPVYEVYEGERYELKFLGNKFFSDEYLYSLFDINTVGVDILVLEGFKDKIEEEYRKKG
FFDVNVEYELEDHRILIKIKEGERYKAKVYINGKKIEIPYDEEKIQDLISKEIQYLEKMGYVTATYELKKKINKDKKEVN
VHVKINKGMRYIVWSFKIESELFEDLNEKISLKFPKALDYETLDEIYKEINKRLREKGYFDAKVFTDIRMQKVKDALLMF
YKVKVIPGERYEYGDTLIYGLEKTRLKEAEYVLEKEKYFSKEVEERSVWNAIESEIFKSLRLEDYVDRESKKVHRLAYFQ
EKKRGVIGLSAGFNTFEGFKLSAELSLRNLLGIGLINTNTFSISEKYELYRVSFKDNFLFSRRFFGETSLFKDYEEHDTY
ELFTEGFAFSLGYRLKPFTFVGISFSNFEAKTTGAERDKGTYRKLGLSFSVKERFRLVLFRGYGHRNYSKIELEGKIKKE
FFEKFGSRLKFSYGYATKKAPIFERFFLGGYKRMKGYTYESIGSPLGGRQMLYISPEIYYLLNRNLELITFLELGKVENK
FPSLYKNMKKDIGFSAGFRTPVGLIRGDIAYPLEDFKVKPSRLKFYLSVEFFF
>Mature_853_residues
MIFFLFLIFSLSFGFEVYIKSNYPLKKDNLRHVINEKNYAKILEMLKQIPEIREVRYEKRKDKLLIYVERYPIIKEIKIK
GNVFLRDEDVKNVLGIEEGIPLIEDNPKTYEEILEKYYKEIGFLNADTKVNISLDDKGNAIFYINIREGNLYFLEDIQFE
GVKKLQKKELIKASGLVIGSIFDIDKVEDAEENLENFYRKKGFFESFVYLKGIKKEKLKRKFREALFPETDSFLKSLSIG
LKNLVNHPLATLKALIGKGKVGIPVYEVYEGERYELKFLGNKFFSDEYLYSLFDINTVGVDILVLEGFKDKIEEEYRKKG
FFDVNVEYELEDHRILIKIKEGERYKAKVYINGKKIEIPYDEEKIQDLISKEIQYLEKMGYVTATYELKKKINKDKKEVN
VHVKINKGMRYIVWSFKIESELFEDLNEKISLKFPKALDYETLDEIYKEINKRLREKGYFDAKVFTDIRMQKVKDALLMF
YKVKVIPGERYEYGDTLIYGLEKTRLKEAEYVLEKEKYFSKEVEERSVWNAIESEIFKSLRLEDYVDRESKKVHRLAYFQ
EKKRGVIGLSAGFNTFEGFKLSAELSLRNLLGIGLINTNTFSISEKYELYRVSFKDNFLFSRRFFGETSLFKDYEEHDTY
ELFTEGFAFSLGYRLKPFTFVGISFSNFEAKTTGAERDKGTYRKLGLSFSVKERFRLVLFRGYGHRNYSKIELEGKIKKE
FFEKFGSRLKFSYGYATKKAPIFERFFLGGYKRMKGYTYESIGSPLGGRQMLYISPEIYYLLNRNLELITFLELGKVENK
FPSLYKNMKKDIGFSAGFRTPVGLIRGDIAYPLEDFKVKPSRLKFYLSVEFFF

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 100885; Mature: 100885

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFFLFLIFSLSFGFEVYIKSNYPLKKDNLRHVINEKNYAKILEMLKQIPEIREVRYEKR
CHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHC
KDKLLIYVERYPIIKEIKIKGNVFLRDEDVKNVLGIEEGIPLIEDNPKTYEEILEKYYKE
CCCEEEEEECCCCEEEEEECCCEEEECCHHHHHHCHHCCCCCCCCCCHHHHHHHHHHHHH
IGFLNADTKVNISLDDKGNAIFYINIREGNLYFLEDIQFEGVKKLQKKELIKASGLVIGS
HCCCCCCCEEEEEECCCCCEEEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHCCEEEEE
IFDIDKVEDAEENLENFYRKKGFFESFVYLKGIKKEKLKRKFREALFPETDSFLKSLSIG
EECCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
LKNLVNHPLATLKALIGKGKVGIPVYEVYEGERYELKFLGNKFFSDEYLYSLFDINTVGV
HHHHHCCHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEECCCCCCHHHHHHHHCCCCCCE
DILVLEGFKDKIEEEYRKKGFFDVNVEYELEDHRILIKIKEGERYKAKVYINGKKIEIPY
EEEEECCHHHHHHHHHHHCCCEEEEEEEEECCCEEEEEEECCCCEEEEEEECCEEEECCC
DEEKIQDLISKEIQYLEKMGYVTATYELKKKINKDKKEVNVHVKINKGMRYIVWSFKIES
CHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHCCCCCEEEEEEEEECCCCEEEEEEEEEHH
ELFEDLNEKISLKFPKALDYETLDEIYKEINKRLREKGYFDAKVFTDIRMQKVKDALLMF
HHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEE
YKVKVIPGERYEYGDTLIYGLEKTRLKEAEYVLEKEKYFSKEVEERSVWNAIESEIFKSL
EEEEECCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLEDYVDRESKKVHRLAYFQEKKRGVIGLSAGFNTFEGFKLSAELSLRNLLGIGLINTNT
CHHHHHCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEHHHHHHHEEEEEECCE
FSISEKYELYRVSFKDNFLFSRRFFGETSLFKDYEEHDTYELFTEGFAFSLGYRLKPFTF
EEECCCEEEEEEEECCCEEEEHHHCCCHHHHCCHHHCCHHHHHHCCCEEECCCCCCCEEE
VGISFSNFEAKTTGAERDKGTYRKLGLSFSVKERFRLVLFRGYGHRNYSKIELEGKIKKE
EEEEECCCCCCCCCCCCCCCCHHHCCCCEEHHHHEEEEEEECCCCCCCEEEEECCCHHHH
FFEKFGSRLKFSYGYATKKAPIFERFFLGGYKRMKGYTYESIGSPLGGRQMLYISPEIYY
HHHHHCCCEEEEECCCCCCCCHHHHHHHCCHHHHCCCCHHHHCCCCCCCEEEEECCEEEE
LLNRNLELITFLELGKVENKFPSLYKNMKKDIGFSAGFRTPVGLIRGDIAYPLEDFKVKP
EECCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHHCCCCC
SRLKFYLSVEFFF
CCEEEEEEEEEEC
>Mature Secondary Structure
MIFFLFLIFSLSFGFEVYIKSNYPLKKDNLRHVINEKNYAKILEMLKQIPEIREVRYEKR
CHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHC
KDKLLIYVERYPIIKEIKIKGNVFLRDEDVKNVLGIEEGIPLIEDNPKTYEEILEKYYKE
CCCEEEEEECCCCEEEEEECCCEEEECCHHHHHHCHHCCCCCCCCCCHHHHHHHHHHHHH
IGFLNADTKVNISLDDKGNAIFYINIREGNLYFLEDIQFEGVKKLQKKELIKASGLVIGS
HCCCCCCCEEEEEECCCCCEEEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHCCEEEEE
IFDIDKVEDAEENLENFYRKKGFFESFVYLKGIKKEKLKRKFREALFPETDSFLKSLSIG
EECCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
LKNLVNHPLATLKALIGKGKVGIPVYEVYEGERYELKFLGNKFFSDEYLYSLFDINTVGV
HHHHHCCHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEECCCCCCHHHHHHHHCCCCCCE
DILVLEGFKDKIEEEYRKKGFFDVNVEYELEDHRILIKIKEGERYKAKVYINGKKIEIPY
EEEEECCHHHHHHHHHHHCCCEEEEEEEEECCCEEEEEEECCCCEEEEEEECCEEEECCC
DEEKIQDLISKEIQYLEKMGYVTATYELKKKINKDKKEVNVHVKINKGMRYIVWSFKIES
CHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHCCCCCEEEEEEEEECCCCEEEEEEEEEHH
ELFEDLNEKISLKFPKALDYETLDEIYKEINKRLREKGYFDAKVFTDIRMQKVKDALLMF
HHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEE
YKVKVIPGERYEYGDTLIYGLEKTRLKEAEYVLEKEKYFSKEVEERSVWNAIESEIFKSL
EEEEECCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLEDYVDRESKKVHRLAYFQEKKRGVIGLSAGFNTFEGFKLSAELSLRNLLGIGLINTNT
CHHHHHCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEHHHHHHHEEEEEECCE
FSISEKYELYRVSFKDNFLFSRRFFGETSLFKDYEEHDTYELFTEGFAFSLGYRLKPFTF
EEECCCEEEEEEEECCCEEEEHHHCCCHHHHCCHHHCCHHHHHHCCCEEECCCCCCCEEE
VGISFSNFEAKTTGAERDKGTYRKLGLSFSVKERFRLVLFRGYGHRNYSKIELEGKIKKE
EEEEECCCCCCCCCCCCCCCCHHHCCCCEEHHHHEEEEEEECCCCCCCEEEEECCCHHHH
FFEKFGSRLKFSYGYATKKAPIFERFFLGGYKRMKGYTYESIGSPLGGRQMLYISPEIYY
HHHHHCCCEEEEECCCCCCCCHHHHHHHCCHHHHCCCCHHHHCCCCCCCEEEEECCEEEE
LLNRNLELITFLELGKVENKFPSLYKNMKKDIGFSAGFRTPVGLIRGDIAYPLEDFKVKP
EECCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHHCCCCC
SRLKFYLSVEFFF
CCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA