| Definition | Archaeoglobus fulgidus DSM 4304, complete genome. |
|---|---|
| Accession | NC_000917 |
| Length | 2,178,400 |
Click here to switch to the map view.
The map label for this gene is oadA
Identifier: 18677784
GI number: 18677784
Start: 1116935
End: 1118377
Strand: Reverse
Name: oadA
Synonym: AF1252m
Alternate gene names: 18677784
Gene position: 1118377-1116935 (Counterclockwise)
Preceding gene: 11498854
Following gene: 11498850
Centisome position: 51.34
GC content: 51.84
Gene sequence:
>1443_bases ATGGCAAAAGTAAAAATTGTTGACTTAACTCTTAGAGACGGACACCAGTCCCTGCTTGCCACAAGAATGAGAACGAGAGA CATGCTCCCAATTCTCGAAACTCTCGACGAGTCGGGAATTTACTCGCTTGAAGTTTGGGGCGGTGCAACCTTTGACGCCT GCCACCGCTTTCTAAACGAGAACCCGTGGGAGAGGCTGAGAGAAATCAGAAAGAGAGTTAAGAACGCAAAGCTTCAGATG CTGCTTCGAGGGCAAAATCTCGTGGGATACCGCCACTATCCTGACGATATTGTTGAGAAGTTTGTCCAGAAAACGATAGA AAACGGACTCGACGTTTTCAGAATTTTCGACGCTCTTAACGACGTAAGGAATTTGATTTCGTCCATTAAGGCTGCTAAAA AGTACAATGCGGACCACATACAGGGGACGATATGCTACACCATCTCTCCCGTCCACACCGTGGAGAAGTACGTAGAAATT GCAAACGAGCTTGCGGCGCTTGAGGTCGATTCCATCTGCCTGAAGGATATGGCGGGGATGCTTTCTCCGAAAATGGCATA CGAGCTTGTAAAAGCGCTGAAGAAGGAGGTTGGACTGCCAATAAACGTCCACTCACACTACACGAGCGGGATGGCTTCGA TGGCGTTGCTGAAGGGCGTTGAGGCGGGAGCGGAAATGATTGATACCTGCATGTCTCCGCTGAGCAGCGGGACCTCCCAC CCTCCGACGGAGAGCATGGTCTATGCTCTGAACGAGCTTGGTTACGACACAGGCGTGAAGCTGGATATTCTGCTTGAGGC GAGAGAGTACTTCATGAAGATAAGGGAGAAGTACTCAGGCTACCTTAACCCTCTCTCGACAATTCCTGACACGAGAGTCT TGGTTTACCAGATTCCGGGAGGGATGTTCAGCAACCTTATTGCCCAGCTTCAGGAGCAGAACGCCCTCGACAGGCTTCAG GAGGTTCTAGAGGAGGTGCCAAGAGTGAGGGAAGACCTGGGCTATCCGCCGCTCGTCACTCCAACGAGCCAGATTGTAGG CGTGCAGGCGGTGATTAATGTCCTGGTGGGGGAGAGGTACAAGGTCGTGACGAGGGAAACCAAGGACTTGGTGAAGGGGA TGTACGGGAGAACTCCCGCTCCGATCAAGCCCGAGATTGTAAAGAAGATTCTTGGCGATGAAAAGCCGATCGACTGCAGA CCTGCCGACCTGCTTGAGCCTGAGTTCGAGAAGAGGAAGCAGGAACTCATTGAGGCAGGAATAGAGAATCCCAGCGATGA GGACGTTTTGCTCTACGCACTCTTCCCGCAAACCGGCCTGAAATTCCTGAAAGGGGAAATGGTCGAGGAGCCGTTCCCAG TTGCGGGAGGAAAGATTGAGGGGAGCTTCGAGGTTGAGATAGACGGGCAGAAGTACGTGGTTAAAGTCGCGCCAGAAAAG TGA
Upstream 100 bases:
>100_bases AACCTAAATAAACTTTCCTGAAGAACGTAAATCTTGATCTTTTGAGGTGCAAGCAATATTAAAAACAAAAAATTTTTGTA TTTCCCATCAGGCTTGAGAC
Downstream 100 bases:
>100_bases TATACCTCTTTTTCCAATTTTTAGCATGGAGCTTGAAACGGAAATTATTGTCGACAAGGTGGATGTTGAAAACCCGATTC TGATAACGAGCTTTCCGGGA
Product: oxaloacetate decarboxylase
Products: NA
Alternate protein names: Pyruvic carboxylase B [H]
Number of amino acids: Translated: 480; Mature: 479
Protein sequence:
>480_residues MAKVKIVDLTLRDGHQSLLATRMRTRDMLPILETLDESGIYSLEVWGGATFDACHRFLNENPWERLREIRKRVKNAKLQM LLRGQNLVGYRHYPDDIVEKFVQKTIENGLDVFRIFDALNDVRNLISSIKAAKKYNADHIQGTICYTISPVHTVEKYVEI ANELAALEVDSICLKDMAGMLSPKMAYELVKALKKEVGLPINVHSHYTSGMASMALLKGVEAGAEMIDTCMSPLSSGTSH PPTESMVYALNELGYDTGVKLDILLEAREYFMKIREKYSGYLNPLSTIPDTRVLVYQIPGGMFSNLIAQLQEQNALDRLQ EVLEEVPRVREDLGYPPLVTPTSQIVGVQAVINVLVGERYKVVTRETKDLVKGMYGRTPAPIKPEIVKKILGDEKPIDCR PADLLEPEFEKRKQELIEAGIENPSDEDVLLYALFPQTGLKFLKGEMVEEPFPVAGGKIEGSFEVEIDGQKYVVKVAPEK
Sequences:
>Translated_480_residues MAKVKIVDLTLRDGHQSLLATRMRTRDMLPILETLDESGIYSLEVWGGATFDACHRFLNENPWERLREIRKRVKNAKLQM LLRGQNLVGYRHYPDDIVEKFVQKTIENGLDVFRIFDALNDVRNLISSIKAAKKYNADHIQGTICYTISPVHTVEKYVEI ANELAALEVDSICLKDMAGMLSPKMAYELVKALKKEVGLPINVHSHYTSGMASMALLKGVEAGAEMIDTCMSPLSSGTSH PPTESMVYALNELGYDTGVKLDILLEAREYFMKIREKYSGYLNPLSTIPDTRVLVYQIPGGMFSNLIAQLQEQNALDRLQ EVLEEVPRVREDLGYPPLVTPTSQIVGVQAVINVLVGERYKVVTRETKDLVKGMYGRTPAPIKPEIVKKILGDEKPIDCR PADLLEPEFEKRKQELIEAGIENPSDEDVLLYALFPQTGLKFLKGEMVEEPFPVAGGKIEGSFEVEIDGQKYVVKVAPEK >Mature_479_residues AKVKIVDLTLRDGHQSLLATRMRTRDMLPILETLDESGIYSLEVWGGATFDACHRFLNENPWERLREIRKRVKNAKLQML LRGQNLVGYRHYPDDIVEKFVQKTIENGLDVFRIFDALNDVRNLISSIKAAKKYNADHIQGTICYTISPVHTVEKYVEIA NELAALEVDSICLKDMAGMLSPKMAYELVKALKKEVGLPINVHSHYTSGMASMALLKGVEAGAEMIDTCMSPLSSGTSHP PTESMVYALNELGYDTGVKLDILLEAREYFMKIREKYSGYLNPLSTIPDTRVLVYQIPGGMFSNLIAQLQEQNALDRLQE VLEEVPRVREDLGYPPLVTPTSQIVGVQAVINVLVGERYKVVTRETKDLVKGMYGRTPAPIKPEIVKKILGDEKPIDCRP ADLLEPEFEKRKQELIEAGIENPSDEDVLLYALFPQTGLKFLKGEMVEEPFPVAGGKIEGSFEVEIDGQKYVVKVAPEK
Specific function: Pyruvate carboxylase catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second [H]
COG id: COG5016
COG function: function code C; Pyruvate/oxaloacetate carboxyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 carboxyltransferase domain [H]
Homologues:
Organism=Homo sapiens, GI106049528, Length=498, Percent_Identity=33.5341365461847, Blast_Score=245, Evalue=7e-65, Organism=Homo sapiens, GI106049295, Length=498, Percent_Identity=33.5341365461847, Blast_Score=245, Evalue=7e-65, Organism=Homo sapiens, GI106049292, Length=498, Percent_Identity=33.5341365461847, Blast_Score=245, Evalue=7e-65, Organism=Caenorhabditis elegans, GI17562816, Length=457, Percent_Identity=35.4485776805252, Blast_Score=254, Evalue=6e-68, Organism=Saccharomyces cerevisiae, GI6319695, Length=461, Percent_Identity=34.056399132321, Blast_Score=253, Evalue=6e-68, Organism=Saccharomyces cerevisiae, GI6321376, Length=461, Percent_Identity=34.2733188720174, Blast_Score=252, Evalue=1e-67, Organism=Drosophila melanogaster, GI24652212, Length=463, Percent_Identity=36.2850971922246, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24652210, Length=463, Percent_Identity=36.2850971922246, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24652214, Length=463, Percent_Identity=36.2850971922246, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI19921944, Length=463, Percent_Identity=36.2850971922246, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24652216, Length=463, Percent_Identity=36.2850971922246, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI281363050, Length=463, Percent_Identity=36.2850971922246, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24652224, Length=463, Percent_Identity=36.2850971922246, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24652222, Length=463, Percent_Identity=36.2850971922246, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24652220, Length=463, Percent_Identity=36.2850971922246, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24652218, Length=463, Percent_Identity=36.2850971922246, Blast_Score=253, Evalue=2e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001882 - InterPro: IPR000089 - InterPro: IPR003379 - InterPro: IPR005776 - InterPro: IPR000891 - InterPro: IPR011053 [H]
Pfam domain/function: PF00364 Biotin_lipoyl; PF00682 HMGL-like; PF02436 PYC_OADA [H]
EC number: =6.4.1.1 [H]
Molecular weight: Translated: 53915; Mature: 53784
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: PS50991 PYR_CT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVKIVDLTLRDGHQSLLATRMRTRDMLPILETLDESGIYSLEVWGGATFDACHRFLNE CCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCC NPWERLREIRKRVKNAKLQMLLRGQNLVGYRHYPDDIVEKFVQKTIENGLDVFRIFDALN CHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH DVRNLISSIKAAKKYNADHIQGTICYTISPVHTVEKYVEIANELAALEVDSICLKDMAGM HHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSPKMAYELVKALKKEVGLPINVHSHYTSGMASMALLKGVEAGAEMIDTCMSPLSSGTSH HCHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PPTESMVYALNELGYDTGVKLDILLEAREYFMKIREKYSGYLNPLSTIPDTRVLVYQIPG CCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCHHCCCCCEEEEEECCC GMFSNLIAQLQEQNALDRLQEVLEEVPRVREDLGYPPLVTPTSQIVGVQAVINVLVGERY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCH KVVTRETKDLVKGMYGRTPAPIKPEIVKKILGDEKPIDCRPADLLEPEFEKRKQELIEAG HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHC IENPSDEDVLLYALFPQTGLKFLKGEMVEEPFPVAGGKIEGSFEVEIDGQKYVVKVAPEK CCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCEECCEEEEEECCCEEEEEECCCC >Mature Secondary Structure AKVKIVDLTLRDGHQSLLATRMRTRDMLPILETLDESGIYSLEVWGGATFDACHRFLNE CCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCC NPWERLREIRKRVKNAKLQMLLRGQNLVGYRHYPDDIVEKFVQKTIENGLDVFRIFDALN CHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH DVRNLISSIKAAKKYNADHIQGTICYTISPVHTVEKYVEIANELAALEVDSICLKDMAGM HHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSPKMAYELVKALKKEVGLPINVHSHYTSGMASMALLKGVEAGAEMIDTCMSPLSSGTSH HCHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PPTESMVYALNELGYDTGVKLDILLEAREYFMKIREKYSGYLNPLSTIPDTRVLVYQIPG CCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCHHCCCCCEEEEEECCC GMFSNLIAQLQEQNALDRLQEVLEEVPRVREDLGYPPLVTPTSQIVGVQAVINVLVGERY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCH KVVTRETKDLVKGMYGRTPAPIKPEIVKKILGDEKPIDCRPADLLEPEFEKRKQELIEAG HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHC IENPSDEDVLLYALFPQTGLKFLKGEMVEEPFPVAGGKIEGSFEVEIDGQKYVVKVAPEK CCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCEECCEEEEEECCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087; 11195096 [H]