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The map label for this gene is rpl29P

Identifier: 11499502

GI number: 11499502

Start: 1721079

End: 1721285

Strand: Reverse

Name: rpl29P

Synonym: AF1918

Alternate gene names: 11499502

Gene position: 1721285-1721079 (Counterclockwise)

Preceding gene: 11499503

Following gene: 11499501

Centisome position: 79.02

GC content: 54.59

Gene sequence:

>207_bases
GTGAAAGCGGTGAAGATGAAGGAGATAAGGGAGATGAGCAGGGAGGAGAAGCTCAGGAAGCTGAGGGAGCTGGAGCTTGA
ACTTCTCAAGCTCAGAACCCTCGTGAGAAGCGGTGGCGCAGTGGAGAACCCGGGGAGAATCAACCTCATCAGGAAGGACA
TTGCAAGGCTTAAGATGGCGCTATGCGAGGAAGGCTACAGGGTGTAG

Upstream 100 bases:

>100_bases
AAGCTCGGAGTTCTGGGAGTTAGCGTTAGGATAATTCCGCCGGATGTGACTCTGCCCGACGAGTTTGAGGTTAAGGATGT
AAATATTGAGCATCTGAGGG

Downstream 100 bases:

>100_bases
AGCTGATAGCGAGGGACTGGATTGGCCTGATGGTGGAAGTGGTGGAGAGTCCAAACCACAGCGAAGTGGGGATAAAGGGA
GAAGTGGTTGATGAGACTCA

Product: 50S ribosomal protein L29P (rpl29P)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MKAVKMKEIREMSREEKLRKLRELELELLKLRTLVRSGGAVENPGRINLIRKDIARLKMALCEEGYRV

Sequences:

>Translated_68_residues
MKAVKMKEIREMSREEKLRKLRELELELLKLRTLVRSGGAVENPGRINLIRKDIARLKMALCEEGYRV
>Mature_68_residues
MKAVKMKEIREMSREEKLRKLRELELELLKLRTLVRSGGAVENPGRINLIRKDIARLKMALCEEGYRV

Specific function: Unknown

COG id: COG0255

COG function: function code J; Ribosomal protein L29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL29_ARCFU (O28361)

Other databases:

- EMBL:   AE000782
- PIR:   E69489
- RefSeq:   NP_070743.1
- ProteinModelPortal:   O28361
- SMR:   O28361
- GeneID:   1485141
- GenomeReviews:   AE000782_GR
- KEGG:   afu:AF1918
- NMPDR:   fig|224325.1.peg.1904
- TIGR:   AF_1918
- HOGENOM:   HBG730819
- ProtClustDB:   CLSK2747088
- BioCyc:   AFUL224325:AF_1918-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00374_A
- InterPro:   IPR001854
- InterPro:   IPR018254
- Gene3D:   G3DSA:1.10.287.310
- TIGRFAMs:   TIGR00012

Pfam domain/function: PF00831 Ribosomal_L29; SSF46561 Ribosomal_L29

EC number: NA

Molecular weight: Translated: 8010; Mature: 8010

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAVKMKEIREMSREEKLRKLRELELELLKLRTLVRSGGAVENPGRINLIRKDIARLKMA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
LCEEGYRV
HHHCCCCC
>Mature Secondary Structure
MKAVKMKEIREMSREEKLRKLRELELELLKLRTLVRSGGAVENPGRINLIRKDIARLKMA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
LCEEGYRV
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475