| Definition | Archaeoglobus fulgidus DSM 4304, complete genome. |
|---|---|
| Accession | NC_000917 |
| Length | 2,178,400 |
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Identifier: 11499443
GI number: 11499443
Start: 1671367
End: 1672236
Strand: Reverse
Name: Not Available
Synonym: AF1859
Alternate gene names: NA
Gene position: 1672236-1671367 (Counterclockwise)
Preceding gene: 11499444
Following gene: 11499442
Centisome position: 76.76
GC content: 48.51
Gene sequence:
>870_bases ATGTCCTTCTCCCTCCAACTCACCAGACTTAAAGCCAGACTCTACTTCCCCCAGTATCACCTTCCGCCCTTCCTCGGCAA CAAGTTCAGAGGGGGCTTTGGCAGCGTTCTGCTGAAGGCCGTCTGCAGCTACCTTAAACCATCCTGTAACATCTGCAAGT CTGTCGATGACTGCCTCTACCATGCCCTTTACACAAGAGACAGGCAGAAAAGGGGCAGATCCCAGCCTGTACGCCCCATC GTGTTCATCCCGCCCTTTTTCGGCAGGTCTGTAAGCGGAAGAGGAGAGCTAACGCTTTACATCAACGTTTTTGGGGACTA CGTCAAGTACTTACCACACATCATATATGGTCTCCGATATCTTGGCAAAATGGGGCTCAATGCTACAAGCAAATACGAAA TAGTAAGCATTTCAGATGCCATAAGCGGAAAGGAGGTTTACGATGGCGAAACGGTTTTTGTTGAGAACCTTAGTAGCATT GAGCTGGGCAAAATCAAACCCAGAGAGGTGGAAAAGGAGATAGAGGTTGATTATCTAACTCCCATGGAAGCCAAAACCCC CATAAATCTTCCATTCCTCATTCACATAGTGCGAAGGAGGCTAATCCTCTTCGTCAACGAGTATGGCAGTGGAGAGGTGC CTGAATTTTACTGCGAAGCTGAAACACTGGAATCAAGCTGGGAGAAACACGAGTTGCATCACAGGTCGAAAAGGCAGGGG TTAAGGTCTTTTTTCGGTGTTACGGGGAGGGCGAGATATTCGATTTCAGAAATTGACGATAATGCTCTGACTCTCCTGTC AATAGGCGAGCTTATTGGCGGTGGAGCAAAGGCGAGCTTCGGGATGGGATTTTTCAGGATTCGGAGTTGA
Upstream 100 bases:
>100_bases GGACTCGAAAGAGCTGAGAGTTACAGCGAAATGTTCGAAATACTTGGAAAGACGGGGATAATTGTGAAAAACTCTCTTCA AAACAGGTTTTGAGCAAAAT
Downstream 100 bases:
>100_bases TTTTGTTGTTGATTGCGTTCCGTTGAAAATATTTAGAGCATTATAATTAATCTATCGAAACAGAAAAAGAAATATTCACA AAAGGTTTATAACTGAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MSFSLQLTRLKARLYFPQYHLPPFLGNKFRGGFGSVLLKAVCSYLKPSCNICKSVDDCLYHALYTRDRQKRGRSQPVRPI VFIPPFFGRSVSGRGELTLYINVFGDYVKYLPHIIYGLRYLGKMGLNATSKYEIVSISDAISGKEVYDGETVFVENLSSI ELGKIKPREVEKEIEVDYLTPMEAKTPINLPFLIHIVRRRLILFVNEYGSGEVPEFYCEAETLESSWEKHELHHRSKRQG LRSFFGVTGRARYSISEIDDNALTLLSIGELIGGGAKASFGMGFFRIRS
Sequences:
>Translated_289_residues MSFSLQLTRLKARLYFPQYHLPPFLGNKFRGGFGSVLLKAVCSYLKPSCNICKSVDDCLYHALYTRDRQKRGRSQPVRPI VFIPPFFGRSVSGRGELTLYINVFGDYVKYLPHIIYGLRYLGKMGLNATSKYEIVSISDAISGKEVYDGETVFVENLSSI ELGKIKPREVEKEIEVDYLTPMEAKTPINLPFLIHIVRRRLILFVNEYGSGEVPEFYCEAETLESSWEKHELHHRSKRQG LRSFFGVTGRARYSISEIDDNALTLLSIGELIGGGAKASFGMGFFRIRS >Mature_288_residues SFSLQLTRLKARLYFPQYHLPPFLGNKFRGGFGSVLLKAVCSYLKPSCNICKSVDDCLYHALYTRDRQKRGRSQPVRPIV FIPPFFGRSVSGRGELTLYINVFGDYVKYLPHIIYGLRYLGKMGLNATSKYEIVSISDAISGKEVYDGETVFVENLSSIE LGKIKPREVEKEIEVDYLTPMEAKTPINLPFLIHIVRRRLILFVNEYGSGEVPEFYCEAETLESSWEKHELHHRSKRQGL RSFFGVTGRARYSISEIDDNALTLLSIGELIGGGAKASFGMGFFRIRS
Specific function: Unknown
COG id: COG5551
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1859_ARCFU (O28420)
Other databases:
- EMBL: AE000782 - PIR: B69482 - RefSeq: NP_070684.1 - GeneID: 1485080 - GenomeReviews: AE000782_GR - KEGG: afu:AF1859 - NMPDR: fig|224325.1.peg.1845 - TIGR: AF_1859 - BioCyc: AFUL224325:AF_1859-MONOMER - InterPro: IPR019267 - InterPro: IPR010156 - TIGRFAMs: TIGR01877
Pfam domain/function: PF10040 DUF2276
EC number: NA
Molecular weight: Translated: 32862; Mature: 32731
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFSLQLTRLKARLYFPQYHLPPFLGNKFRGGFGSVLLKAVCSYLKPSCNICKSVDDCLY CCCEEEHHEEHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH HALYTRDRQKRGRSQPVRPIVFIPPFFGRSVSGRGELTLYINVFGDYVKYLPHIIYGLRY HHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHH LGKMGLNATSKYEIVSISDAISGKEVYDGETVFVENLSSIELGKIKPREVEKEIEVDYLT HHHCCCCCCCCEEEEEECCCCCCCEECCCCEEEEECCCCCEECCCCHHHHHHHCCEEEEC PMEAKTPINLPFLIHIVRRRLILFVNEYGSGEVPEFYCEAETLESSWEKHELHHRSKRQG CCCCCCCCCCHHHHHHHHHHHEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHH LRSFFGVTGRARYSISEIDDNALTLLSIGELIGGGAKASFGMGFFRIRS HHHHHCCCCCCEEEHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECC >Mature Secondary Structure SFSLQLTRLKARLYFPQYHLPPFLGNKFRGGFGSVLLKAVCSYLKPSCNICKSVDDCLY CCEEEHHEEHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH HALYTRDRQKRGRSQPVRPIVFIPPFFGRSVSGRGELTLYINVFGDYVKYLPHIIYGLRY HHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHH LGKMGLNATSKYEIVSISDAISGKEVYDGETVFVENLSSIELGKIKPREVEKEIEVDYLT HHHCCCCCCCCEEEEEECCCCCCCEECCCCEEEEECCCCCEECCCCHHHHHHHCCEEEEC PMEAKTPINLPFLIHIVRRRLILFVNEYGSGEVPEFYCEAETLESSWEKHELHHRSKRQG CCCCCCCCCCHHHHHHHHHHHEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHH LRSFFGVTGRARYSISEIDDNALTLLSIGELIGGGAKASFGMGFFRIRS HHHHHCCCCCCEEEHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475