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The map label for this gene is cbiM-2

Identifier: 11499428

GI number: 11499428

Start: 1654754

End: 1655575

Strand: Reverse

Name: cbiM-2

Synonym: AF1843

Alternate gene names: NA

Gene position: 1655575-1654754 (Counterclockwise)

Preceding gene: 11499429

Following gene: 11499427

Centisome position: 76.0

GC content: 52.92

Gene sequence:

>822_bases
GTGCTCGGATACTCGATTTACAGGCTGAGAGGGCAGAAGCTGACGTCCCTCTTCGGGATTGTTGCAGCGGCTATTTTTGC
TGCACAGATGCTCAACTGGCCCATTCCGGGAGGAACATCAGCCCACTTCGTTGGAGGGGCGCTTGCGGGAATCCTGCTTG
GTCCATACGCTGGGGCGCTCGCGATGGCAGTGGTTTTAACAATTCAATGTCTGGTGTTTGCGGATGGAGGCATAACTGCT
CTCGGGGCCAACGTATGGAACATGGCTATTGTTAACGTTTTCGTTGGTTACTACGTTTACAGAGCCATTGAGAGGTTCAA
CAGGTCTGCAGCGGCCTTCATTGCAGGATGGATTGGCATAACGCTCGCAGCCATCTTTGCAGGAATCGAAATCGGCATTT
CCACATCCTTCGGCTACGGGCTCAAGGTTACATTGCCCGTGATGGGGACTTGGCACGCACTCCTCGGTTTGGTTGAGGGA
ACGATTACGGCTGGAGTTGTGAGCTACATAGCTGCAGCGAGGCCTGACGTCATTGAGCAGAAAGCAGCTCCGGGAAAGCT
GGCTCTTGCAGTTATTGCTGCAATGATTGCAGTTTCACCGCTCTTTGCCTACGCCGCAGAGCTCGTTGGATACTCTGAAC
CTCTTGAGAACGCTGCCGCGATGCTCGGCCTTGAAGAAAACCCCATTTACGAGGGATTGCTTCCAGATTACACCCTGCCG
GGCCTTGACCCCTATGCGGGAACGCTGATTGCTGGTATAGTTGGAACAGTAATCGTTTTAGCTCTTGGATTCGCATTAAC
CAGATATGCACGAACTGCTTGA

Upstream 100 bases:

>100_bases
AAAAATCTGAAAAAAAGTAATACGAGGTGAGAAATTGCACATCCCTGATGGCTACCTCGATTTGAGCATAGCGGGTTTGT
TTTACATTCTTAGCATAGCG

Downstream 100 bases:

>100_bases
AAGGACAATTAAGGAGGCTTCGAGCTACTTTCAAAATTTTTTGCTCCACGAATACACAAAAAGGAGCGCTTTGCATGAGG
TTGATGCGAGAGTAAAGCTA

Product: cobalamin biosynthesis protein (cbiM-2)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MLGYSIYRLRGQKLTSLFGIVAAAIFAAQMLNWPIPGGTSAHFVGGALAGILLGPYAGALAMAVVLTIQCLVFADGGITA
LGANVWNMAIVNVFVGYYVYRAIERFNRSAAAFIAGWIGITLAAIFAGIEIGISTSFGYGLKVTLPVMGTWHALLGLVEG
TITAGVVSYIAAARPDVIEQKAAPGKLALAVIAAMIAVSPLFAYAAELVGYSEPLENAAAMLGLEENPIYEGLLPDYTLP
GLDPYAGTLIAGIVGTVIVLALGFALTRYARTA

Sequences:

>Translated_273_residues
MLGYSIYRLRGQKLTSLFGIVAAAIFAAQMLNWPIPGGTSAHFVGGALAGILLGPYAGALAMAVVLTIQCLVFADGGITA
LGANVWNMAIVNVFVGYYVYRAIERFNRSAAAFIAGWIGITLAAIFAGIEIGISTSFGYGLKVTLPVMGTWHALLGLVEG
TITAGVVSYIAAARPDVIEQKAAPGKLALAVIAAMIAVSPLFAYAAELVGYSEPLENAAAMLGLEENPIYEGLLPDYTLP
GLDPYAGTLIAGIVGTVIVLALGFALTRYARTA
>Mature_273_residues
MLGYSIYRLRGQKLTSLFGIVAAAIFAAQMLNWPIPGGTSAHFVGGALAGILLGPYAGALAMAVVLTIQCLVFADGGITA
LGANVWNMAIVNVFVGYYVYRAIERFNRSAAAFIAGWIGITLAAIFAGIEIGISTSFGYGLKVTLPVMGTWHALLGLVEG
TITAGVVSYIAAARPDVIEQKAAPGKLALAVIAAMIAVSPLFAYAAELVGYSEPLENAAAMLGLEENPIYEGLLPDYTLP
GLDPYAGTLIAGIVGTVIVLALGFALTRYARTA

Specific function: Unknown

COG id: COG0310

COG function: function code P; ABC-type Co2+ transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002751 [H]

Pfam domain/function: PF01891 CbiM [H]

EC number: NA

Molecular weight: Translated: 28292; Mature: 28292

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGYSIYRLRGQKLTSLFGIVAAAIFAAQMLNWPIPGGTSAHFVGGALAGILLGPYAGAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AMAVVLTIQCLVFADGGITALGANVWNMAIVNVFVGYYVYRAIERFNRSAAAFIAGWIGI
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
TLAAIFAGIEIGISTSFGYGLKVTLPVMGTWHALLGLVEGTITAGVVSYIAAARPDVIEQ
HHHHHHHHHHHEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
KAAPGKLALAVIAAMIAVSPLFAYAAELVGYSEPLENAAAMLGLEENPIYEGLLPDYTLP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
GLDPYAGTLIAGIVGTVIVLALGFALTRYARTA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLGYSIYRLRGQKLTSLFGIVAAAIFAAQMLNWPIPGGTSAHFVGGALAGILLGPYAGAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AMAVVLTIQCLVFADGGITALGANVWNMAIVNVFVGYYVYRAIERFNRSAAAFIAGWIGI
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
TLAAIFAGIEIGISTSFGYGLKVTLPVMGTWHALLGLVEGTITAGVVSYIAAARPDVIEQ
HHHHHHHHHHHEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
KAAPGKLALAVIAAMIAVSPLFAYAAELVGYSEPLENAAAMLGLEENPIYEGLLPDYTLP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
GLDPYAGTLIAGIVGTVIVLALGFALTRYARTA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]