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Identifier: 11499390

GI number: 11499390

Start: 1616741

End: 1617421

Strand: Reverse

Name: Not Available

Synonym: AF1801

Alternate gene names: 11499390

Gene position: 1617421-1616741 (Counterclockwise)

Preceding gene: 11499391

Following gene: 11499389

Centisome position: 74.25

GC content: 48.6

Gene sequence:

>681_bases
GTGCTCGTTGAACTGAAGATTCCCGAGAACGTGGGGTTCATTGCGAGGGTTGCGAAAAACTATGGCATAAAGAGGCTCTG
TCTCTACAAATGCAGGGTTACGGAAGAAAGCTACCACACCGCCGCTAACGCGAAAGATGTGCTGGAGAATGCTGTTGTAG
TTGAGGACCTGCAAGAATTTCTCCAAAGGATGAATCTGATCGTCGGAACGACCGGAATTCCGGGAGGGGACTACAAGTAC
CTGAGAAAGGAGCTCCTTGCTCCAGAAGACCTGCCTTCCGTTGCCAAGGGCAGGGTTGCCGTTCTTTTCGGAAGGGAGGA
CTACGGACTTTACAACGAAGAGCTTGAAATGTGCCACGTCCTTGTCAGAGTGCCGACGAGCGAAGAGTATCCTGTTATGA
ACGTCAGCCATGCCGCGGCAGTTATACTTTACTTTCTCAGAGAAATCGAAAGAGTTCAAGAGGATGACGAGATTGCCACC
TTTAGGGACATCGAGGTTACGCTCTCGAATCTCGTCGAAATGCTGAGAATGGTGCAGTATCCGGAGCACAGGATAAAGAG
AACCGTTGTAATCTTCAGAAGAATACTCGGAAGGGCCGGAGTTAAGAAATATGAGGTCCACAGCCTGAACGCAATCTTTC
GCAAAACCGTTAGCTACATAAAGAGGATGAATAGAATATAA

Upstream 100 bases:

>100_bases
TGAACGAGAGGCTGAAACTGGAAATTCTGAAAATCGCCATGGGGCTTTAGAAAGAAAGATTAACATTGGAGTTGCGGAAG
AGACAATGGAAGTTTGGCCC

Downstream 100 bases:

>100_bases
GCATGAACAAATACTGGACATTGGTTCTGCTGCTTTCAATACTTGTTGTTCTCGCACTAACCTTCTACTTCTTCACACCG
CTGCTCGACGGCATTGTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MLVELKIPENVGFIARVAKNYGIKRLCLYKCRVTEESYHTAANAKDVLENAVVVEDLQEFLQRMNLIVGTTGIPGGDYKY
LRKELLAPEDLPSVAKGRVAVLFGREDYGLYNEELEMCHVLVRVPTSEEYPVMNVSHAAAVILYFLREIERVQEDDEIAT
FRDIEVTLSNLVEMLRMVQYPEHRIKRTVVIFRRILGRAGVKKYEVHSLNAIFRKTVSYIKRMNRI

Sequences:

>Translated_226_residues
MLVELKIPENVGFIARVAKNYGIKRLCLYKCRVTEESYHTAANAKDVLENAVVVEDLQEFLQRMNLIVGTTGIPGGDYKY
LRKELLAPEDLPSVAKGRVAVLFGREDYGLYNEELEMCHVLVRVPTSEEYPVMNVSHAAAVILYFLREIERVQEDDEIAT
FRDIEVTLSNLVEMLRMVQYPEHRIKRTVVIFRRILGRAGVKKYEVHSLNAIFRKTVSYIKRMNRI
>Mature_226_residues
MLVELKIPENVGFIARVAKNYGIKRLCLYKCRVTEESYHTAANAKDVLENAVVVEDLQEFLQRMNLIVGTTGIPGGDYKY
LRKELLAPEDLPSVAKGRVAVLFGREDYGLYNEELEMCHVLVRVPTSEEYPVMNVSHAAAVILYFLREIERVQEDDEIAT
FRDIEVTLSNLVEMLRMVQYPEHRIKRTVVIFRRILGRAGVKKYEVHSLNAIFRKTVSYIKRMNRI

Specific function: Unknown

COG id: COG0565

COG function: function code J; rRNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase TrmH family [H]

Homologues:

Organism=Escherichia coli, GI1788881, Length=242, Percent_Identity=31.8181818181818, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1790865, Length=206, Percent_Identity=26.6990291262136, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004384
- InterPro:   IPR001537 [H]

Pfam domain/function: PF00588 SpoU_methylase [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 26124; Mature: 26124

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVELKIPENVGFIARVAKNYGIKRLCLYKCRVTEESYHTAANAKDVLENAVVVEDLQEF
CEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHH
LQRMNLIVGTTGIPGGDYKYLRKELLAPEDLPSVAKGRVAVLFGREDYGLYNEELEMCHV
HHHHHHHEECCCCCCCCHHHHHHHHCCCCCCCHHHCCCEEEEECCCCCCCHHHHHHHHHH
LVRVPTSEEYPVMNVSHAAAVILYFLREIERVQEDDEIATFRDIEVTLSNLVEMLRMVQY
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC
PEHRIKRTVVIFRRILGRAGVKKYEVHSLNAIFRKTVSYIKRMNRI
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLVELKIPENVGFIARVAKNYGIKRLCLYKCRVTEESYHTAANAKDVLENAVVVEDLQEF
CEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHH
LQRMNLIVGTTGIPGGDYKYLRKELLAPEDLPSVAKGRVAVLFGREDYGLYNEELEMCHV
HHHHHHHEECCCCCCCCHHHHHHHHCCCCCCCHHHCCCEEEEECCCCCCCHHHHHHHHHH
LVRVPTSEEYPVMNVSHAAAVILYFLREIERVQEDDEIATFRDIEVTLSNLVEMLRMVQY
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC
PEHRIKRTVVIFRRILGRAGVKKYEVHSLNAIFRKTVSYIKRMNRI
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]