Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 11499366

GI number: 11499366

Start: 1597386

End: 1598123

Strand: Reverse

Name: Not Available

Synonym: AF1777

Alternate gene names: 11499366

Gene position: 1598123-1597386 (Counterclockwise)

Preceding gene: 11499374

Following gene: 11499364

Centisome position: 73.36

GC content: 51.63

Gene sequence:

>738_bases
ATGAACCTCGCCGAAGTTGTACGATTTCTCGACGATTTTTTGGAGATTAACAGCTATCAGGATGTTTCAAACAACGGACT
GCAGGTTGAGGGTAGCGAGGAAGTGAAGAAGGTCGCCTTTGCCGTTGACGCATCCATGGAGAGCTTCAGGGCTGCAAAGG
CTGTAAATGCGGACATGCTCGTCGTCCATCACGGCCTTATCTGGGGCGGTATAGGCTACATAAGGGGAATTGTGAAAAGA
AGGATTGAGTTTCTGCTGAGAAGCAACCTCTCCCTCTACGCAGCCCACCTTCCGCTTGATGCCCACAGGGAGGTGGGGAA
TAACGCCGTGATTCTAAGAAAAATTGGCGCAGAGCCGCAGGAGGAGTTTGGAGAGTACAAGGGCGTGAAGATTGGCTTCT
CGGCAAAGCTGGAAAAGGCAACTGCAGTAGGGGAGATTGCGGAAAAGCTTGGCCCGGCGATGGTTCTGCCCTTTGGGGAG
GAGAGGGTCAGAAAAGTTGCTGCAGTGTCGGGAAAGGGCTGCTTTGCCTTAAACGAGGCTATTGATGCTGGAGTGGAGCT
TTTCATCACGGGAGAGCCTGAGCACGAAGCCTACCATCTGGCAAAGGAGGGTGGAATCAACGTATTTTTTCTCGGGCACT
ACGAGAGTGAGAAGTTTGGCGTTCAGAGCCTGATGGAGGTTGTGAGGGAAAAATTGGGGATTGAGGCTGTGTTTCTTGAC
ATTCCGACGAACCTTTAA

Upstream 100 bases:

>100_bases
ACCCTCCTTTCAAATTTCGTTACTCTCAAACAAAGTGGTATATAAGAATTTTGATTGCAGGAAACGTTAGATTAAATTAC
CACGCTCTCATAATAAGCCC

Downstream 100 bases:

>100_bases
GGCCAGAGCCCGTAGTAGGCGTTCAGGATGATTATTAAAACTCCCGTAACGATGCCTGCAGCAAGAATGGTTTTTGGGCT
AACCTTTATCTGAGTTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MNLAEVVRFLDDFLEINSYQDVSNNGLQVEGSEEVKKVAFAVDASMESFRAAKAVNADMLVVHHGLIWGGIGYIRGIVKR
RIEFLLRSNLSLYAAHLPLDAHREVGNNAVILRKIGAEPQEEFGEYKGVKIGFSAKLEKATAVGEIAEKLGPAMVLPFGE
ERVRKVAAVSGKGCFALNEAIDAGVELFITGEPEHEAYHLAKEGGINVFFLGHYESEKFGVQSLMEVVREKLGIEAVFLD
IPTNL

Sequences:

>Translated_245_residues
MNLAEVVRFLDDFLEINSYQDVSNNGLQVEGSEEVKKVAFAVDASMESFRAAKAVNADMLVVHHGLIWGGIGYIRGIVKR
RIEFLLRSNLSLYAAHLPLDAHREVGNNAVILRKIGAEPQEEFGEYKGVKIGFSAKLEKATAVGEIAEKLGPAMVLPFGE
ERVRKVAAVSGKGCFALNEAIDAGVELFITGEPEHEAYHLAKEGGINVFFLGHYESEKFGVQSLMEVVREKLGIEAVFLD
IPTNL
>Mature_245_residues
MNLAEVVRFLDDFLEINSYQDVSNNGLQVEGSEEVKKVAFAVDASMESFRAAKAVNADMLVVHHGLIWGGIGYIRGIVKR
RIEFLLRSNLSLYAAHLPLDAHREVGNNAVILRKIGAEPQEEFGEYKGVKIGFSAKLEKATAVGEIAEKLGPAMVLPFGE
ERVRKVAAVSGKGCFALNEAIDAGVELFITGEPEHEAYHLAKEGGINVFFLGHYESEKFGVQSLMEVVREKLGIEAVFLD
IPTNL

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family

Homologues:

Organism=Escherichia coli, GI1786928, Length=251, Percent_Identity=35.4581673306773, Blast_Score=138, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1777_ARCFU (O28497)

Other databases:

- EMBL:   AE000782
- PIR:   H69471
- RefSeq:   NP_070605.1
- ProteinModelPortal:   O28497
- SMR:   O28497
- GeneID:   1485000
- GenomeReviews:   AE000782_GR
- KEGG:   afu:AF1777
- NMPDR:   fig|224325.1.peg.1766
- TIGR:   AF_1777
- HOGENOM:   HBG554751
- OMA:   PLDVHPE
- ProtClustDB:   CLSK541854
- BioCyc:   AFUL224325:AF_1777-MONOMER
- InterPro:   IPR002678
- PANTHER:   PTHR13799
- TIGRFAMs:   TIGR00486

Pfam domain/function: PF01784 NIF3; SSF102705 interacting_NIF3

EC number: NA

Molecular weight: Translated: 26860; Mature: 26860

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLAEVVRFLDDFLEINSYQDVSNNGLQVEGSEEVKKVAFAVDASMESFRAAKAVNADML
CCHHHHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
VVHHGLIWGGIGYIRGIVKRRIEFLLRSNLSLYAAHLPLDAHREVGNNAVILRKIGAEPQ
EEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCEEEEEECCCCHH
EEFGEYKGVKIGFSAKLEKATAVGEIAEKLGPAMVLPFGEERVRKVAAVSGKGCFALNEA
HHHHCCCCEEEECCCHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHCCCCCCEEEHHH
IDAGVELFITGEPEHEAYHLAKEGGINVFFLGHYESEKFGVQSLMEVVREKLGIEAVFLD
HHCCEEEEEECCCCCHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEE
IPTNL
CCCCC
>Mature Secondary Structure
MNLAEVVRFLDDFLEINSYQDVSNNGLQVEGSEEVKKVAFAVDASMESFRAAKAVNADML
CCHHHHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
VVHHGLIWGGIGYIRGIVKRRIEFLLRSNLSLYAAHLPLDAHREVGNNAVILRKIGAEPQ
EEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCEEEEEECCCCHH
EEFGEYKGVKIGFSAKLEKATAVGEIAEKLGPAMVLPFGEERVRKVAAVSGKGCFALNEA
HHHHCCCCEEEECCCHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHCCCCCCEEEHHH
IDAGVELFITGEPEHEAYHLAKEGGINVFFLGHYESEKFGVQSLMEVVREKLGIEAVFLD
HHCCEEEEEECCCCCHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEE
IPTNL
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475