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Identifier: 11499108

GI number: 11499108

Start: 1368651

End: 1369235

Strand: Reverse

Name: Not Available

Synonym: AF1513

Alternate gene names: NA

Gene position: 1369235-1368651 (Counterclockwise)

Preceding gene: 11499109

Following gene: 11499107

Centisome position: 62.86

GC content: 54.87

Gene sequence:

>585_bases
ATGATGCGGAAATTGCTGCTCGGTCTGTTGGTGTTGGTGGTTTCGGCAGCACCTGCAATGGGGCTGATTCCCGGCGATTG
GACGGGTGACGGTAACAACCTCGATTTGAGTGTTTTGCAGCCAGGCGACATTCTGCTCTGCAGGGGCTGTGCGGGATGGC
TTGAGGACACGTTTGGCAACATCGTCGGCCATTGGCACCACGCTGCGATGTACATAGGCAACGGTCAGATGGTTGAGGCG
TGGAAGGATGGCGTGAGGGTTGTTTCGGTCAGCATGGCGAGAAATGCTGATGAGGTTGCTGTTTACAGGGTGAAGACCAG
CAATGATATAAAGTCCAAGGCCGTTAGCTGGGCCCTCACGAAGGTTGGCCTTCCCTACGACTACAAGTGGCTGACCTACG
TTGGAGGAAAGGAGGTTTACGGAAAAAGCTACTATTGCAGCGAGCTGATCTGGGCTGCTTACAAGGCCAATGGTGGGCCC
GACATCGACCAGAATCCGGGATGGAGCTGGAGGTACGGATACAACGTAGCTCCCCAGGAGCTTGCTGACGACGGAGACAC
CTACCTAGTAGCATACTCTTCCTAA

Upstream 100 bases:

>100_bases
TTTCCAAAAAAGCAAGCATAAAAACTCATGTTTTATTCGTATAATAATCAATCAAAAAAGAAAGGAAAACTTTAAATAGT
AATTATTTATCGGGAAATTC

Downstream 100 bases:

>100_bases
CTTTTTTCGAATTATTTTCTAAACGACTGCACCAAAATCAAAGCTTTATTATTCTCAACCAGATTGTTTCTGTGAGTGGC
CCGCCTGAGGACAGAGAACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MMRKLLLGLLVLVVSAAPAMGLIPGDWTGDGNNLDLSVLQPGDILLCRGCAGWLEDTFGNIVGHWHHAAMYIGNGQMVEA
WKDGVRVVSVSMARNADEVAVYRVKTSNDIKSKAVSWALTKVGLPYDYKWLTYVGGKEVYGKSYYCSELIWAAYKANGGP
DIDQNPGWSWRYGYNVAPQELADDGDTYLVAYSS

Sequences:

>Translated_194_residues
MMRKLLLGLLVLVVSAAPAMGLIPGDWTGDGNNLDLSVLQPGDILLCRGCAGWLEDTFGNIVGHWHHAAMYIGNGQMVEA
WKDGVRVVSVSMARNADEVAVYRVKTSNDIKSKAVSWALTKVGLPYDYKWLTYVGGKEVYGKSYYCSELIWAAYKANGGP
DIDQNPGWSWRYGYNVAPQELADDGDTYLVAYSS
>Mature_194_residues
MMRKLLLGLLVLVVSAAPAMGLIPGDWTGDGNNLDLSVLQPGDILLCRGCAGWLEDTFGNIVGHWHHAAMYIGNGQMVEA
WKDGVRVVSVSMARNADEVAVYRVKTSNDIKSKAVSWALTKVGLPYDYKWLTYVGGKEVYGKSYYCSELIWAAYKANGGP
DIDQNPGWSWRYGYNVAPQELADDGDTYLVAYSS

Specific function: Unknown

COG id: COG3863

COG function: function code S; Uncharacterized distant relative of cell wall-associated hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21306; Mature: 21306

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRKLLLGLLVLVVSAAPAMGLIPGDWTGDGNNLDLSVLQPGDILLCRGCAGWLEDTFGN
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCHHHHHHHHH
IVGHWHHAAMYIGNGQMVEAWKDGVRVVSVSMARNADEVAVYRVKTSNDIKSKAVSWALT
HHHHHEEEEEEECCCEEEEHHHCCEEEEEEEHHCCCCCEEEEEEECCCCHHHHHHHHHHH
KVGLPYDYKWLTYVGGKEVYGKSYYCSELIWAAYKANGGPDIDQNPGWSWRYGYNVAPQE
HCCCCCCCEEEEEECCCHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCHHH
LADDGDTYLVAYSS
HCCCCCEEEEEECC
>Mature Secondary Structure
MMRKLLLGLLVLVVSAAPAMGLIPGDWTGDGNNLDLSVLQPGDILLCRGCAGWLEDTFGN
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCHHHHHHHHH
IVGHWHHAAMYIGNGQMVEAWKDGVRVVSVSMARNADEVAVYRVKTSNDIKSKAVSWALT
HHHHHEEEEEEECCCEEEEHHHCCEEEEEEEHHCCCCCEEEEEEECCCCHHHHHHHHHHH
KVGLPYDYKWLTYVGGKEVYGKSYYCSELIWAAYKANGGPDIDQNPGWSWRYGYNVAPQE
HCCCCCCCEEEEEECCCHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCHHH
LADDGDTYLVAYSS
HCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA