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Identifier: 11499017

GI number: 11499017

Start: 1282663

End: 1283340

Strand: Reverse

Name: Not Available

Synonym: AF1422

Alternate gene names: 11499017

Gene position: 1283340-1282663 (Counterclockwise)

Preceding gene: 11499018

Following gene: 11499016

Centisome position: 58.91

GC content: 48.23

Gene sequence:

>678_bases
ATGATTGGATTAATCGGCGGAATGAGCTGGGAGTCGACGGTCGAATACTACCGAATCATGAACGAAATGGTCAAAGAAAA
GCTCGGGGGCTGGAACTCCGCCGAAGTACTCCTTTACTCCGTGAACTTTGAGGAAATCGTCAGTTTGCAGAAGGCAGGCG
AGTGGGACAGGCTCGGAGAAATTCTTGGAGATATTGCGGTGAAGCTTGAGAATGCCGGAGCTAAGGCAGTTCTAATCTGC
ACGAACACTATGCACAAGGTTGCTGATGCTGTGGAGAAAAGAATCGGCATTCCGCTGATAAACATAATCGATGTGACTGC
TGAAGCTTTGAAGGGGGATGGTGTCAAAAAAGCCGGGCTGCTTGGCACGAAGTTCACGATGGAGGATGGATTTTATCAGG
AAAGGATGAAAAAGCACGGGATTGAAGTAATTGTCCCCGAAAAGGAGGAGGACAGAAATGCGATTCACAGCATCATCTTT
GACGAACTCTGCCTCGGAATAATAAGGGAGGAGTCGGAGAGAAGGCTTAGAAAAATTGTAGATGAACTTAAGGAGAGGGG
TGCTGAGGGAATAATTTTAGGATGCACCGAACTCCCGCTAATCCTCAGGGATGAGGAGTTTTACAACACCACAAAACTGC
ACGCCGAAGCTGCGGTTCAGCTTCTGCTCGAAGGGTAG

Upstream 100 bases:

>100_bases
CAGCAGACTATTTTGGTATAGAAAAGGTCGTGCAGAAGTCGCTTGACGAGATTTTTCCGCAGTAGCCAAAGCTTTATCTT
GTTAGGCGATTAGTCTATTT

Downstream 100 bases:

>100_bases
AGTATTGGTAGCACAGCAAACTTTTTAACATTCAAAGCAGAATTGCATTATGCAGGAACCGCCAGTGTACCCTCCCCCAT
ACAAACCGCCCGAAATGAAG

Product: aspartate racemase

Products: D-aspartate

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MIGLIGGMSWESTVEYYRIMNEMVKEKLGGWNSAEVLLYSVNFEEIVSLQKAGEWDRLGEILGDIAVKLENAGAKAVLIC
TNTMHKVADAVEKRIGIPLINIIDVTAEALKGDGVKKAGLLGTKFTMEDGFYQERMKKHGIEVIVPEKEEDRNAIHSIIF
DELCLGIIREESERRLRKIVDELKERGAEGIILGCTELPLILRDEEFYNTTKLHAEAAVQLLLEG

Sequences:

>Translated_225_residues
MIGLIGGMSWESTVEYYRIMNEMVKEKLGGWNSAEVLLYSVNFEEIVSLQKAGEWDRLGEILGDIAVKLENAGAKAVLIC
TNTMHKVADAVEKRIGIPLINIIDVTAEALKGDGVKKAGLLGTKFTMEDGFYQERMKKHGIEVIVPEKEEDRNAIHSIIF
DELCLGIIREESERRLRKIVDELKERGAEGIILGCTELPLILRDEEFYNTTKLHAEAAVQLLLEG
>Mature_225_residues
MIGLIGGMSWESTVEYYRIMNEMVKEKLGGWNSAEVLLYSVNFEEIVSLQKAGEWDRLGEILGDIAVKLENAGAKAVLIC
TNTMHKVADAVEKRIGIPLINIIDVTAEALKGDGVKKAGLLGTKFTMEDGFYQERMKKHGIEVIVPEKEEDRNAIHSIIF
DELCLGIIREESERRLRKIVDELKERGAEGIILGCTELPLILRDEEFYNTTKLHAEAAVQLLLEG

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI1789205, Length=227, Percent_Identity=47.5770925110132, Blast_Score=229, Evalue=1e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: 5.1.1.13

Molecular weight: Translated: 25189; Mature: 25189

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS00923 ASP_GLU_RACEMASE_1 ; PS00924 ASP_GLU_RACEMASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGLIGGMSWESTVEYYRIMNEMVKEKLGGWNSAEVLLYSVNFEEIVSLQKAGEWDRLGE
CEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCHHHHHH
ILGDIAVKLENAGAKAVLICTNTMHKVADAVEKRIGIPLINIIDVTAEALKGDGVKKAGL
HHHHHHHHEECCCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCC
LGTKFTMEDGFYQERMKKHGIEVIVPEKEEDRNAIHSIIFDELCLGIIREESERRLRKIV
CCCEEECCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DELKERGAEGIILGCTELPLILRDEEFYNTTKLHAEAAVQLLLEG
HHHHHCCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIGLIGGMSWESTVEYYRIMNEMVKEKLGGWNSAEVLLYSVNFEEIVSLQKAGEWDRLGE
CEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCHHHHHH
ILGDIAVKLENAGAKAVLICTNTMHKVADAVEKRIGIPLINIIDVTAEALKGDGVKKAGL
HHHHHHHHEECCCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCC
LGTKFTMEDGFYQERMKKHGIEVIVPEKEEDRNAIHSIIFDELCLGIIREESERRLRKIV
CCCEEECCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DELKERGAEGIILGCTELPLILRDEEFYNTTKLHAEAAVQLLLEG
HHHHHCCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-aspartate

Specific reaction: L-aspartate = D-aspartate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6350602; 2836407; 9278503 [H]