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Identifier: 11499000

GI number: 11499000

Start: 1254836

End: 1255300

Strand: Reverse

Name: Not Available

Synonym: AF1405

Alternate gene names: NA

Gene position: 1255300-1254836 (Counterclockwise)

Preceding gene: 11499001

Following gene: 11498999

Centisome position: 57.62

GC content: 51.4

Gene sequence:

>465_bases
ATGCGACGCAGGAGGCTCAGGAAGAAGGAGGCAAAGAAGGTTAGTGCTGAGGTGGAGGAAAACGCCGGGGCCAGGGTTGA
GGGCGAGATGGACGAAGTTGACTTTGGCAGCATAAAGGTAATCTTGGTTGATAACGAACCTCTGGTCATCAACTACGACG
GAAGATACTACCTCTCCGTTTACGGGGCCATAAAGCTCAAGCCGGAAAAGTACAGGGTGACAGTTGATGAGGGGGCGCTG
AAGTTCGTGATGAACGGTGCGGACGTTATGAAGCCGGGCATCGTTTATGCGGACGAGAGGATAAAGGAAGGTGACTTTGT
ATTTGTGACAGTCGAGGGCAAGGACAGTCCGATTGCCGTTGGGGTGGCGCTCTGCAATGGAGAGGAGATGGTAAGGGGGA
AAGGTAAGGCTGTGAAGAACATACACCACATTAAGGACAAAATCTGGAAGCAGTTCTTTGGATAA

Upstream 100 bases:

>100_bases
CAGTCTTAAAGGATTACGTTCAGAAATTTTACGTAAGTATGGCTGAATCCGTGGGGAGTGGTAACTGATAAATATTTTTA
AAGTCTCGCCTAAATCCGCT

Downstream 100 bases:

>100_bases
AGTTAAAATTGTCAGAGGTTACTCAAATCATGGCTCTCGGATTCGTTCTAATAAAGGTCTCTCCCGGAAAGGAGAGGAAA
GTTTATGACGCACTTGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MRRRRLRKKEAKKVSAEVEENAGARVEGEMDEVDFGSIKVILVDNEPLVINYDGRYYLSVYGAIKLKPEKYRVTVDEGAL
KFVMNGADVMKPGIVYADERIKEGDFVFVTVEGKDSPIAVGVALCNGEEMVRGKGKAVKNIHHIKDKIWKQFFG

Sequences:

>Translated_154_residues
MRRRRLRKKEAKKVSAEVEENAGARVEGEMDEVDFGSIKVILVDNEPLVINYDGRYYLSVYGAIKLKPEKYRVTVDEGAL
KFVMNGADVMKPGIVYADERIKEGDFVFVTVEGKDSPIAVGVALCNGEEMVRGKGKAVKNIHHIKDKIWKQFFG
>Mature_154_residues
MRRRRLRKKEAKKVSAEVEENAGARVEGEMDEVDFGSIKVILVDNEPLVINYDGRYYLSVYGAIKLKPEKYRVTVDEGAL
KFVMNGADVMKPGIVYADERIKEGDFVFVTVEGKDSPIAVGVALCNGEEMVRGKGKAVKNIHHIKDKIWKQFFG

Specific function: Unknown

COG id: COG2016

COG function: function code J; Predicted RNA-binding protein (contains PUA domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PUA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022430
- InterPro:   IPR015266
- InterPro:   IPR002478
- InterPro:   IPR015947
- InterPro:   IPR016437
- InterPro:   IPR004521 [H]

Pfam domain/function: PF01472 PUA [H]

EC number: NA

Molecular weight: Translated: 17352; Mature: 17352

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS50890 PUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRRLRKKEAKKVSAEVEENAGARVEGEMDEVDFGSIKVILVDNEPLVINYDGRYYLSV
CCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEEECCCCEEEEECCEEEEEE
YGAIKLKPEKYRVTVDEGALKFVMNGADVMKPGIVYADERIKEGDFVFVTVEGKDSPIAV
EEEEEECCCCEEEEECCCCEEEEECCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCEEE
GVALCNGEEMVRGKGKAVKNIHHIKDKIWKQFFG
EEEEECCCHHCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRRRRLRKKEAKKVSAEVEENAGARVEGEMDEVDFGSIKVILVDNEPLVINYDGRYYLSV
CCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEEECCCCEEEEECCEEEEEE
YGAIKLKPEKYRVTVDEGALKFVMNGADVMKPGIVYADERIKEGDFVFVTVEGKDSPIAV
EEEEEECCCCEEEEECCCCEEEEECCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCEEE
GVALCNGEEMVRGKGKAVKNIHHIKDKIWKQFFG
EEEEECCCHHCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]