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The map label for this gene is baiF-3

Identifier: 11498913

GI number: 11498913

Start: 1172599

End: 1173594

Strand: Reverse

Name: baiF-3

Synonym: AF1315

Alternate gene names: 11498913

Gene position: 1173594-1172599 (Counterclockwise)

Preceding gene: 11498915

Following gene: 11498912

Centisome position: 53.87

GC content: 51.51

Gene sequence:

>996_bases
ATGCTTGAAGATGTTAAAGTTGTTGAGGTTGCTGCCTTCTACCCCGGCCCCTTTTGCTGCCAGCTTCTGAGGAATTTGGG
GGCAGAAGTGATTAAGGTCGAGCCCCCCGGCGGTGAGCCGGGGAGGATGCTTGACGCAGTTTTTGCGGCGATGAATTACG
GCAAGAAGTTCCTTTTCCTTGACCTCAAGTCGGAGGATGGTTTGAGAGAGTTCATGAAGCTTGCAGAGGATGCCGATGTG
GTGGTTGAGGGGTTCAGGCCGGGAGTGGCGAAGAAGCTTGGAATTGATTACGAGAGCGTTAAGAAGGTGAACGAATCCAT
TATCTACTGCTCCATTTCAGCCTTTGGACAGGAAAACAGGCTTTCCCATTTGCCGGCACACGATTTAAACTGCCTCGGTC
TTGGGGGCATTCTGGAGATTTCGGCAATGGGCAGGGAGATGAGGGACCCCAACTTGCAGCTCGCAGATTTCTCATCAGCC
GTTTATGCTGCCATAGCAATTCTTGCTGCCCTTCACGAGAGGGAGAGGACGGGGAGGGGTAGATACATAGACATCAGCAT
GTTCCACTCAGCCCTCTTTTCCGCCCCAATCCACACTTCCTCCATACTAAACGGGCTGGGAATTTTACCAGCATTCTCAA
GCAATCCCGCATACGGCATCTACAGGACGAGAGACGGATACATAACTCTCGGCATCATTGCTGAAGAGCACTTCTGGAGG
CGACTCTGCTCAGCTTTGAATCTTGGATTCAATTTTTCCCTCGTTGAGAGCTTTTCAAGATACGAGGAGGTCAGGAAGGC
GATTGAGGAAAAGCTCGGCCGGATGACTACTGAGGAGGCTGTCAAAGTTCTGCAAGACGCCGACGTTCCCGCCTTTGAGG
TCTTGAGCCTGAGGGATGTTGATAAAATTGAGGATAGGGTTAGAGAGAAGCTTGTGGATGAGGTGGAGTGGAACGGAAGG
AGGATAAGGCTGATCAAGCCTCCTTTCAGGTGGTGA

Upstream 100 bases:

>100_bases
AGTTTTCATCGCCCCATTCCTTCCCGCATTCAATGCACTTCAGACGGTACATGCTGCCAGTAAATCACGCACTTTATAAA
TCTTCAAAACAATTCCCGTC

Downstream 100 bases:

>100_bases
GATGGACGTAATTGTCGGAGGGGGAAAGTACGGAGTCGAGGCTGCGAGGTTTCTGGAGAAGAGGTCAAGGGACTACGTCA
TAATCGACAGAAATCCGGAG

Product: bile acid-inducible operon protein F (baiF-3)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MLEDVKVVEVAAFYPGPFCCQLLRNLGAEVIKVEPPGGEPGRMLDAVFAAMNYGKKFLFLDLKSEDGLREFMKLAEDADV
VVEGFRPGVAKKLGIDYESVKKVNESIIYCSISAFGQENRLSHLPAHDLNCLGLGGILEISAMGREMRDPNLQLADFSSA
VYAAIAILAALHERERTGRGRYIDISMFHSALFSAPIHTSSILNGLGILPAFSSNPAYGIYRTRDGYITLGIIAEEHFWR
RLCSALNLGFNFSLVESFSRYEEVRKAIEEKLGRMTTEEAVKVLQDADVPAFEVLSLRDVDKIEDRVREKLVDEVEWNGR
RIRLIKPPFRW

Sequences:

>Translated_331_residues
MLEDVKVVEVAAFYPGPFCCQLLRNLGAEVIKVEPPGGEPGRMLDAVFAAMNYGKKFLFLDLKSEDGLREFMKLAEDADV
VVEGFRPGVAKKLGIDYESVKKVNESIIYCSISAFGQENRLSHLPAHDLNCLGLGGILEISAMGREMRDPNLQLADFSSA
VYAAIAILAALHERERTGRGRYIDISMFHSALFSAPIHTSSILNGLGILPAFSSNPAYGIYRTRDGYITLGIIAEEHFWR
RLCSALNLGFNFSLVESFSRYEEVRKAIEEKLGRMTTEEAVKVLQDADVPAFEVLSLRDVDKIEDRVREKLVDEVEWNGR
RIRLIKPPFRW
>Mature_331_residues
MLEDVKVVEVAAFYPGPFCCQLLRNLGAEVIKVEPPGGEPGRMLDAVFAAMNYGKKFLFLDLKSEDGLREFMKLAEDADV
VVEGFRPGVAKKLGIDYESVKKVNESIIYCSISAFGQENRLSHLPAHDLNCLGLGGILEISAMGREMRDPNLQLADFSSA
VYAAIAILAALHERERTGRGRYIDISMFHSALFSAPIHTSSILNGLGILPAFSSNPAYGIYRTRDGYITLGIIAEEHFWR
RLCSALNLGFNFSLVESFSRYEEVRKAIEEKLGRMTTEEAVKVLQDADVPAFEVLSLRDVDKIEDRVREKLVDEVEWNGR
RIRLIKPPFRW

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI42794625, Length=313, Percent_Identity=32.2683706070287, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI266456254, Length=313, Percent_Identity=32.2683706070287, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI266458393, Length=259, Percent_Identity=35.1351351351351, Blast_Score=127, Evalue=1e-29,
Organism=Homo sapiens, GI266458397, Length=250, Percent_Identity=34.8, Blast_Score=126, Evalue=3e-29,
Organism=Homo sapiens, GI300863128, Length=338, Percent_Identity=27.810650887574, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI300863124, Length=322, Percent_Identity=27.9503105590062, Blast_Score=121, Evalue=7e-28,
Organism=Homo sapiens, GI42822893, Length=135, Percent_Identity=36.2962962962963, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI266458395, Length=135, Percent_Identity=37.037037037037, Blast_Score=92, Evalue=7e-19,
Organism=Homo sapiens, GI300863126, Length=331, Percent_Identity=25.3776435045317, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI13376042, Length=322, Percent_Identity=24.5341614906832, Blast_Score=85, Evalue=8e-17,
Organism=Escherichia coli, GI87082093, Length=337, Percent_Identity=29.3768545994065, Blast_Score=131, Evalue=7e-32,
Organism=Escherichia coli, GI1788717, Length=347, Percent_Identity=25.6484149855908, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1786222, Length=232, Percent_Identity=28.0172413793103, Blast_Score=71, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI115535051, Length=309, Percent_Identity=28.1553398058252, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI32564160, Length=308, Percent_Identity=26.9480519480519, Blast_Score=111, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24585488, Length=319, Percent_Identity=29.7805642633229, Blast_Score=132, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24648431, Length=326, Percent_Identity=30.6748466257669, Blast_Score=132, Evalue=4e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 37139; Mature: 37139

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEDVKVVEVAAFYPGPFCCQLLRNLGAEVIKVEPPGGEPGRMLDAVFAAMNYGKKFLFL
CCCCCEEEEEEEECCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEE
DLKSEDGLREFMKLAEDADVVVEGFRPGVAKKLGIDYESVKKVNESIIYCSISAFGQENR
EECCCCHHHHHHHHHCCCHHHHHCCCCCHHHHHCCCHHHHHHHCCCEEEEEEECCCCCCC
LSHLPAHDLNCLGLGGILEISAMGREMRDPNLQLADFSSAVYAAIAILAALHERERTGRG
CCCCCCCCCCEECCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCC
RYIDISMFHSALFSAPIHTSSILNGLGILPAFSSNPAYGIYRTRDGYITLGIIAEEHFWR
CEEEHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEEEEHHHHHHH
RLCSALNLGFNFSLVESFSRYEEVRKAIEEKLGRMTTEEAVKVLQDADVPAFEVLSLRDV
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHCCH
DKIEDRVREKLVDEVEWNGRRIRLIKPPFRW
HHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
>Mature Secondary Structure
MLEDVKVVEVAAFYPGPFCCQLLRNLGAEVIKVEPPGGEPGRMLDAVFAAMNYGKKFLFL
CCCCCEEEEEEEECCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEE
DLKSEDGLREFMKLAEDADVVVEGFRPGVAKKLGIDYESVKKVNESIIYCSISAFGQENR
EECCCCHHHHHHHHHCCCHHHHHCCCCCHHHHHCCCHHHHHHHCCCEEEEEEECCCCCCC
LSHLPAHDLNCLGLGGILEISAMGREMRDPNLQLADFSSAVYAAIAILAALHERERTGRG
CCCCCCCCCCEECCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCC
RYIDISMFHSALFSAPIHTSSILNGLGILPAFSSNPAYGIYRTRDGYITLGIIAEEHFWR
CEEEHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEEEEHHHHHHH
RLCSALNLGFNFSLVESFSRYEEVRKAIEEKLGRMTTEEAVKVLQDADVPAFEVLSLRDV
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHCCH
DKIEDRVREKLVDEVEWNGRRIRLIKPPFRW
HHHHHHHHHHHHHHHCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]