| Definition | Archaeoglobus fulgidus DSM 4304, complete genome. |
|---|---|
| Accession | NC_000917 |
| Length | 2,178,400 |
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Identifier: 11498864
GI number: 11498864
Start: 1128580
End: 1129275
Strand: Reverse
Name: Not Available
Synonym: AF1265
Alternate gene names: NA
Gene position: 1129275-1128580 (Counterclockwise)
Preceding gene: 11498875
Following gene: 11498862
Centisome position: 51.84
GC content: 51.58
Gene sequence:
>696_bases ATGAAAATAACATGGTTGGGACACGCGGCCTTTTTGCTTGAGGGAAGCATGAAGGTGCTGATTGACCCCTTCCTCACGGG AAATCCCAACGCTCCCGTAAAGCCTGAAGAAGTCAAGGCGGATTACATCCTCGTAACCCACGGCCACGGAGACCATCTTG GAGATGCGGTTGAGATTGCCAAGAGAAACAACGCCCCCATAATCTGCATTCACGAGCTTTCGAGAATTCTTTCGAGGTAT GATGTCGAAACTATGGGAATGAACATGGGTGGGACTGCGAGAACGGGAAGCATTGCAGTTACAATGGTTCCAGCCTGGCA TTCAGCAGATTTGGAAGACGAGCAGGGGAACATAATAAGCGCTGGCCTTCCAGCGGGCTTTATCGTCTCAATGGATGGCG TGAGAGTTTACCACACTGGCGACACGGATGTCTTTCTGGACATGCAGCTAATCGGAGAGCTCCACAGGCCAGATGTGATG CTTCTGCCCATCGGAGACTACTACACCATGGGTATTGCCGGAGCCGTTAAGGCTTTGGAGCTTGTTAAGCCCAAAGTAGC GATACCGATGCACTACAACACCTTCCCGCTGGTCGAGAAGGACCCAGAGGACTTCAGAAAGGCTGTGAAGGCGAAGGGGC TGGATGTCGAAGTTGTGATTCTAAAGCCGGGAGAGAGCTACGAGTTCAACAAGTAA
Upstream 100 bases:
>100_bases ATCGAAAATCAGTTGATAGCTAAAATAATTTTTCTCACAAAATTGAAATTACTTTTCAAGCTCCAAAAAACGTTAAATTT ACTTCTGAAGATTAATACCT
Downstream 100 bases:
>100_bases TTTCCTTTTTTTATCTTCTGGAAGCCACCACGATCCCCATAGCGTCCCTTAACTCAACCAGACAGTTTAAAACCTTCAAA CCGCTGTGGGTGATTATATA
Product: metal-dependent hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MKITWLGHAAFLLEGSMKVLIDPFLTGNPNAPVKPEEVKADYILVTHGHGDHLGDAVEIAKRNNAPIICIHELSRILSRY DVETMGMNMGGTARTGSIAVTMVPAWHSADLEDEQGNIISAGLPAGFIVSMDGVRVYHTGDTDVFLDMQLIGELHRPDVM LLPIGDYYTMGIAGAVKALELVKPKVAIPMHYNTFPLVEKDPEDFRKAVKAKGLDVEVVILKPGESYEFNK
Sequences:
>Translated_231_residues MKITWLGHAAFLLEGSMKVLIDPFLTGNPNAPVKPEEVKADYILVTHGHGDHLGDAVEIAKRNNAPIICIHELSRILSRY DVETMGMNMGGTARTGSIAVTMVPAWHSADLEDEQGNIISAGLPAGFIVSMDGVRVYHTGDTDVFLDMQLIGELHRPDVM LLPIGDYYTMGIAGAVKALELVKPKVAIPMHYNTFPLVEKDPEDFRKAVKAKGLDVEVVILKPGESYEFNK >Mature_231_residues MKITWLGHAAFLLEGSMKVLIDPFLTGNPNAPVKPEEVKADYILVTHGHGDHLGDAVEIAKRNNAPIICIHELSRILSRY DVETMGMNMGGTARTGSIAVTMVPAWHSADLEDEQGNIISAGLPAGFIVSMDGVRVYHTGDTDVFLDMQLIGELHRPDVM LLPIGDYYTMGIAGAVKALELVKPKVAIPMHYNTFPLVEKDPEDFRKAVKAKGLDVEVVILKPGESYEFNK
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0173 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1265_ARCFU (O29003)
Other databases:
- EMBL: AE000782 - PIR: H69407 - RefSeq: NP_070093.1 - ProteinModelPortal: O29003 - GeneID: 1484489 - GenomeReviews: AE000782_GR - KEGG: afu:AF1265 - NMPDR: fig|224325.1.peg.1253 - TIGR: AF_1265 - HOGENOM: HBG741314 - OMA: FPIIDQT - ProtClustDB: PRK00685 - BioCyc: AFUL224325:AF_1265-MONOMER - HAMAP: MF_00457 - InterPro: IPR001279 - InterPro: IPR022877 - SMART: SM00849
Pfam domain/function: PF00753 Lactamase_B
EC number: NA
Molecular weight: Translated: 25278; Mature: 25278
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITWLGHAAFLLEGSMKVLIDPFLTGNPNAPVKPEEVKADYILVTHGHGDHLGDAVEIA CEEEEEEEEEEEECCCEEEEEEEEECCCCCCCCCHHHCCCCEEEEECCCCCCCCHHHHHH KRNNAPIICIHELSRILSRYDVETMGMNMGGTARTGSIAVTMVPAWHSADLEDEQGNIIS HCCCCCEEEHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEE AGLPAGFIVSMDGVRVYHTGDTDVFLDMQLIGELHRPDVMLLPIGDYYTMGIAGAVKALE ECCCCEEEEEECCEEEEECCCCCEEEEHHHHHHCCCCCEEEEECCCCEEHHHHHHHHHHH LVKPKVAIPMHYNTFPLVEKDPEDFRKAVKAKGLDVEVVILKPGESYEFNK HHCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure MKITWLGHAAFLLEGSMKVLIDPFLTGNPNAPVKPEEVKADYILVTHGHGDHLGDAVEIA CEEEEEEEEEEEECCCEEEEEEEEECCCCCCCCCHHHCCCCEEEEECCCCCCCCHHHHHH KRNNAPIICIHELSRILSRYDVETMGMNMGGTARTGSIAVTMVPAWHSADLEDEQGNIIS HCCCCCEEEHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEE AGLPAGFIVSMDGVRVYHTGDTDVFLDMQLIGELHRPDVMLLPIGDYYTMGIAGAVKALE ECCCCEEEEEECCEEEEECCCCCEEEEHHHHHHCCCCCEEEEECCCCEEHHHHHHHHHHH LVKPKVAIPMHYNTFPLVEKDPEDFRKAVKAKGLDVEVVILKPGESYEFNK HHCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475