Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 11498829

GI number: 11498829

Start: 1098760

End: 1099221

Strand: Reverse

Name: Not Available

Synonym: AF1230

Alternate gene names: NA

Gene position: 1099221-1098760 (Counterclockwise)

Preceding gene: 11498830

Following gene: 11498828

Centisome position: 50.46

GC content: 50.43

Gene sequence:

>462_bases
ATGGATGAGTACGTTGAGCTTGACCCAGTAAGGATTGGAGTGAAGGTAAACCCCAAGATGGAGTTTGAAGTTGTGGGGCA
GCCAAGCATCGCTGCTGGTGAGGAGAAGGTCGTCACCTTCGTGATAAAGAACGTGGGCGAGTTTGAAGTCAGAGACGCTA
CTGCCAGAATAACAATCGTCGACCCCTTCTCCTCCACCGATGACTCAGCCTTCATCGGCGATTTGAAGCCCGGTGAGGCT
GCAAACGCAACCTTCAAAATTTCAGTTGATGGCGATGCGACGCCCAAGCTCTACGCTCTCAATCTGGAGGTTAAATACAA
GGATGCCGAGGGAGAGTGGGCCTACAGCGAGCCCGCAAAGGCCATAATAAACGTTACTCCCGCCAAGCCGCCTTACATGC
TTTACGCAGTAATAGCGATAATAGTAATCGCAGCTATTGCAGTTTACCTGAAGAGAAGATAA

Upstream 100 bases:

>100_bases
ATAAAGGCTGGTGAGGAGTTCAAGGCAGTTTTCAAGCTAAAGGCATCGAGCGAGGCGAACCGTCACCTATCCGGCGGACA
TAACCTTGGTTTACAGATCA

Downstream 100 bases:

>100_bases
GCGGTGGAGGTAAGGGATGTTCGCAGAGCTGCTGGACAGAGTTGCGAGGTTCATAGCCAGAAGGCCGGGATTCGTCATTT
CCATCATCTCCATAATTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: S-Layer Domain-Like Protein

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MDEYVELDPVRIGVKVNPKMEFEVVGQPSIAAGEEKVVTFVIKNVGEFEVRDATARITIVDPFSSTDDSAFIGDLKPGEA
ANATFKISVDGDATPKLYALNLEVKYKDAEGEWAYSEPAKAIINVTPAKPPYMLYAVIAIIVIAAIAVYLKRR

Sequences:

>Translated_153_residues
MDEYVELDPVRIGVKVNPKMEFEVVGQPSIAAGEEKVVTFVIKNVGEFEVRDATARITIVDPFSSTDDSAFIGDLKPGEA
ANATFKISVDGDATPKLYALNLEVKYKDAEGEWAYSEPAKAIINVTPAKPPYMLYAVIAIIVIAAIAVYLKRR
>Mature_153_residues
MDEYVELDPVRIGVKVNPKMEFEVVGQPSIAAGEEKVVTFVIKNVGEFEVRDATARITIVDPFSSTDDSAFIGDLKPGEA
ANATFKISVDGDATPKLYALNLEVKYKDAEGEWAYSEPAKAIINVTPAKPPYMLYAVIAIIVIAAIAVYLKRR

Specific function: Unknown

COG id: COG1361

COG function: function code M; S-layer domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16710; Mature: 16710

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEYVELDPVRIGVKVNPKMEFEVVGQPSIAAGEEKVVTFVIKNVGEFEVRDATARITIV
CCCCEEECCEEEEEEECCCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEECCEEEEEEE
DPFSSTDDSAFIGDLKPGEAANATFKISVDGDATPKLYALNLEVKYKDAEGEWAYSEPAK
CCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCEEEEEEEEEEEECCCCCCCCCCCCE
AIINVTPAKPPYMLYAVIAIIVIAAIAVYLKRR
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDEYVELDPVRIGVKVNPKMEFEVVGQPSIAAGEEKVVTFVIKNVGEFEVRDATARITIV
CCCCEEECCEEEEEEECCCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEECCEEEEEEE
DPFSSTDDSAFIGDLKPGEAANATFKISVDGDATPKLYALNLEVKYKDAEGEWAYSEPAK
CCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCEEEEEEEEEEEECCCCCCCCCCCCE
AIINVTPAKPPYMLYAVIAIIVIAAIAVYLKRR
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA