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Identifier: 11498748

GI number: 11498748

Start: 1024228

End: 1024677

Strand: Reverse

Name: Not Available

Synonym: AF1148

Alternate gene names: 11498748

Gene position: 1024677-1024228 (Counterclockwise)

Preceding gene: 11498751

Following gene: 11498746

Centisome position: 47.04

GC content: 45.33

Gene sequence:

>450_bases
ATGGTAAAGATTGATGAGGTTGACATCAAAATTTTGAGAGAATTGCAGGATGATGCCCGCAAAAGCTTGAAGGAAATTTC
AGAAAAGGTAGGAGTGGCCGAGGGGACGGTTTACAACAGAATAAACAAGATGAGAAAAATCGGGCTTATCAAGAAGTTCA
TTCCCGTCGTTGACTACTCAATGCTGGGATACGACCTCATAGCGATAATAGGCATTACCGCAGAGGGTGGTTACCTGACG
GAGATTGAGAAGGAGATTGCGAAGGAGAGAAACGTGACAGCCGTTTACGACGTTACAGGTGACTACGACATTATCGTTGT
GGCCAAGTTCAAGGATAGGGACAGCCTGAACGCCTTTGTAAAAAGAATAGCGGGGATGGACAAGGTACTCAAGACATACA
CAATGCTCGTGCTGAATGTGGTTAAGGAGACGCACCTGATAGACCTCTAA

Upstream 100 bases:

>100_bases
AGGCTATGTTGGCGGGGAGGTGATTAAAGCTTTTGCCTTCAGTTTCGCGCTCAGCTTCAACCTGCAAAAACCTTAAAAAT
TCTTCAAATAATGGAGTTCA

Downstream 100 bases:

>100_bases
GTTGTGTACTCGGCATTCAGCTTCACGTAATCGTAGGTTAGGTCGCAGCCGATGGCAAAGCCCTTTCCATTACCTTTTTC
AAGCCTCAGCCTGATTACAA

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MVKIDEVDIKILRELQDDARKSLKEISEKVGVAEGTVYNRINKMRKIGLIKKFIPVVDYSMLGYDLIAIIGITAEGGYLT
EIEKEIAKERNVTAVYDVTGDYDIIVVAKFKDRDSLNAFVKRIAGMDKVLKTYTMLVLNVVKETHLIDL

Sequences:

>Translated_149_residues
MVKIDEVDIKILRELQDDARKSLKEISEKVGVAEGTVYNRINKMRKIGLIKKFIPVVDYSMLGYDLIAIIGITAEGGYLT
EIEKEIAKERNVTAVYDVTGDYDIIVVAKFKDRDSLNAFVKRIAGMDKVLKTYTMLVLNVVKETHLIDL
>Mature_149_residues
MVKIDEVDIKILRELQDDARKSLKEISEKVGVAEGTVYNRINKMRKIGLIKKFIPVVDYSMLGYDLIAIIGITAEGGYLT
EIEKEIAKERNVTAVYDVTGDYDIIVVAKFKDRDSLNAFVKRIAGMDKVLKTYTMLVLNVVKETHLIDL

Specific function: Activator Of Asna Transcription; Autogenous Regulator Of Its Own Transcription; And Repressor Of The Expression Of Gida At A Post-Transcriptional Level. [C]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790182, Length=139, Percent_Identity=30.9352517985612, Blast_Score=64, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR013196
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 16883; Mature: 16883

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKIDEVDIKILRELQDDARKSLKEISEKVGVAEGTVYNRINKMRKIGLIKKFIPVVDYS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MLGYDLIAIIGITAEGGYLTEIEKEIAKERNVTAVYDVTGDYDIIVVAKFKDRDSLNAFV
HHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCEEEEECCCCEEEEEEEECCCCHHHHHHH
KRIAGMDKVLKTYTMLVLNVVKETHLIDL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVKIDEVDIKILRELQDDARKSLKEISEKVGVAEGTVYNRINKMRKIGLIKKFIPVVDYS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MLGYDLIAIIGITAEGGYLTEIEKEIAKERNVTAVYDVTGDYDIIVVAKFKDRDSLNAFV
HHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCEEEEECCCCEEEEEEEECCCCHHHHHHH
KRIAGMDKVLKTYTMLVLNVVKETHLIDL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA