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The map label for this gene is rps24E

Identifier: 11498714

GI number: 11498714

Start: 996436

End: 996768

Strand: Reverse

Name: rps24E

Synonym: AF1114

Alternate gene names: 11498714

Gene position: 996768-996436 (Counterclockwise)

Preceding gene: 11498715

Following gene: 11498713

Centisome position: 45.76

GC content: 50.15

Gene sequence:

>333_bases
GTGATTGACTTGGAGGTTTACGTTGAGAAAGAAAGGCACAACCCTCTGCTGAGGAGGAGAGAGGTTTACTGCAGACTGAG
CTTCGAGGGAAAAACACCCTCCAGAAAGGAGGTCAGGGGCAAAATAGCGGGGCTGATGAACGCCGAGCCGGAAAGAGTTG
TTGTGGACTACATAAAAACCGAATTTGGCAAAACAGAGGCGAAGTGCTACGTTAAAATCTACGACACGGTTGAAGACCTG
CAGAAGATAGAGGAGGAGCACATAATCGAGAGAAACAAGGTTGAGGAGCAGGCTGAAGAAGCTGAGGAGGCTGAAGCTGG
CGCTGCCGAGTAA

Upstream 100 bases:

>100_bases
GCATTGAAGGTTGACGAGGAGAAGAAAGTTCTAATACTCAACCTGCTTAACAAGATGGAGATAATCGGAGAATGTGATGA
GTTGAAGTACTTGCTTGGAG

Downstream 100 bases:

>100_bases
ATGGAGGTGGGAAAATGGCTAAAGGTGCGGAAAGCATTTACAGATACTACGAGATAAAGGGCGAGAAAGTCGTAAGAAAG
AAGAAATTCTGTCCGAGATG

Product: SSU ribosomal protein S24E (rps24E)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MIDLEVYVEKERHNPLLRRREVYCRLSFEGKTPSRKEVRGKIAGLMNAEPERVVVDYIKTEFGKTEAKCYVKIYDTVEDL
QKIEEEHIIERNKVEEQAEEAEEAEAGAAE

Sequences:

>Translated_110_residues
MIDLEVYVEKERHNPLLRRREVYCRLSFEGKTPSRKEVRGKIAGLMNAEPERVVVDYIKTEFGKTEAKCYVKIYDTVEDL
QKIEEEHIIERNKVEEQAEEAEEAEAGAAE
>Mature_110_residues
MIDLEVYVEKERHNPLLRRREVYCRLSFEGKTPSRKEVRGKIAGLMNAEPERVVVDYIKTEFGKTEAKCYVKIYDTVEDL
QKIEEEHIIERNKVEEQAEEAEEAEAGAAE

Specific function: Unknown

COG id: COG2004

COG function: function code J; Ribosomal protein S24E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S24e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS24_ARCFU (O29151)

Other databases:

- EMBL:   AE000782
- PIR:   A69389
- RefSeq:   NP_069943.1
- ProteinModelPortal:   O29151
- SMR:   O29151
- GeneID:   1484336
- GenomeReviews:   AE000782_GR
- KEGG:   afu:AF1114
- NMPDR:   fig|224325.1.peg.1102
- TIGR:   AF_1114
- HOGENOM:   HBG553552
- OMA:   NPMLHRT
- ProtClustDB:   CLSK2746754
- BioCyc:   AFUL224325:AF_1114-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00545
- InterPro:   IPR012677
- InterPro:   IPR012678
- InterPro:   IPR001976
- InterPro:   IPR018098
- Gene3D:   G3DSA:3.30.70.330
- ProDom:   PD006052

Pfam domain/function: PF01282 Ribosomal_S24e; SSF54189 L23_L15e_core

EC number: NA

Molecular weight: Translated: 12845; Mature: 12845

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS00529 RIBOSOMAL_S24E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDLEVYVEKERHNPLLRRREVYCRLSFEGKTPSRKEVRGKIAGLMNAEPERVVVDYIKT
CCCEEEEEECCCCCHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
EFGKTEAKCYVKIYDTVEDLQKIEEEHIIERNKVEEQAEEAEEAEAGAAE
HCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIDLEVYVEKERHNPLLRRREVYCRLSFEGKTPSRKEVRGKIAGLMNAEPERVVVDYIKT
CCCEEEEEECCCCCHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
EFGKTEAKCYVKIYDTVEDLQKIEEEHIIERNKVEEQAEEAEEAEAGAAE
HCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475