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The map label for this gene is rps27AE

Identifier: 11498713

GI number: 11498713

Start: 996254

End: 996421

Strand: Reverse

Name: rps27AE

Synonym: AF1113

Alternate gene names: 11498713

Gene position: 996421-996254 (Counterclockwise)

Preceding gene: 11498714

Following gene: 11498712

Centisome position: 45.74

GC content: 46.43

Gene sequence:

>168_bases
ATGGCTAAAGGTGCGGAAAGCATTTACAGATACTACGAGATAAAGGGCGAGAAAGTCGTAAGAAAGAAGAAATTCTGTCC
GAGATGTGGTGAGGGAGTCTTCTTAGCTGAGCACAAGGACAGGCTAAGCTGCGGCAAGTGCGGCTACACTGAGTTCAAGA
AGAAATGA

Upstream 100 bases:

>100_bases
TAGAGGAGGAGCACATAATCGAGAGAAACAAGGTTGAGGAGCAGGCTGAAGAAGCTGAGGAGGCTGAAGCTGGCGCTGCC
GAGTAAATGGAGGTGGGAAA

Downstream 100 bases:

>100_bases
TTGCTCTCGGAATAGAGGGCACGGCCTGGAGTTTGAGCATAGGTGTTGTTGATGAGGAGGGCGTTATAGCCCTCGAAAAT
GACCCCTACATCCCGAAAGA

Product: SSU ribosomal protein S27AE (rps27AE)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 55; Mature: 54

Protein sequence:

>55_residues
MAKGAESIYRYYEIKGEKVVRKKKFCPRCGEGVFLAEHKDRLSCGKCGYTEFKKK

Sequences:

>Translated_55_residues
MAKGAESIYRYYEIKGEKVVRKKKFCPRCGEGVFLAEHKDRLSCGKCGYTEFKKK
>Mature_54_residues
AKGAESIYRYYEIKGEKVVRKKKFCPRCGEGVFLAEHKDRLSCGKCGYTEFKKK

Specific function: Unknown

COG id: COG1998

COG function: function code J; Ribosomal protein S27AE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S27Ae family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS27A_ARCFU (O29152)

Other databases:

- EMBL:   AE000782
- PIR:   H69388
- RefSeq:   NP_069942.1
- ProteinModelPortal:   O29152
- SMR:   O29152
- GeneID:   1484335
- GenomeReviews:   AE000782_GR
- KEGG:   afu:AF1113
- NMPDR:   fig|224325.1.peg.1101
- TIGR:   AF_1113
- HOGENOM:   HBG512791
- OMA:   KNKFCPR
- ProtClustDB:   CLSK2746753
- BioCyc:   AFUL224325:AF_1113-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00777
- InterPro:   IPR011331
- InterPro:   IPR002906
- InterPro:   IPR022845
- Gene3D:   G3DSA:2.20.25.30

Pfam domain/function: PF01599 Ribosomal_S27

EC number: NA

Molecular weight: Translated: 6396; Mature: 6264

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
7.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKGAESIYRYYEIKGEKVVRKKKFCPRCGEGVFLAEHKDRLSCGKCGYTEFKKK
CCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKGAESIYRYYEIKGEKVVRKKKFCPRCGEGVFLAEHKDRLSCGKCGYTEFKKK
CCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475