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Identifier: 11498381

GI number: 11498381

Start: 691926

End: 692687

Strand: Reverse

Name: Not Available

Synonym: AF0775

Alternate gene names: 11498381

Gene position: 692687-691926 (Counterclockwise)

Preceding gene: 11498385

Following gene: 11498380

Centisome position: 31.8

GC content: 46.98

Gene sequence:

>762_bases
ATGCTGGAAAGAATTAAGTCGGGCGTCATCGGGCTTGATGAAATCCTCGGTGGGGGGTTCATTAAAAACACAGTCAATGC
AGTCGTAGGCGGCATGGGGTGTGGTAAGACCATTTTCTGCATGAACTACCTTCTTGAAGGCCTTGAAAACGGTGAAAAAT
GTATGTACGCTTCACCAGACCTCGATGTTGACGAGTTTCTGAGGCTTGCCGAATCAATGCATTGGGACTTTTCCAAGTAC
ATTGACAACGGGCAGCTGAACATAATGACGGTTGTGGCGGAAGACGCAGCATCGTTCATAAAAATGGCTTTTGAATACGA
CAGAGTTGCCGTGGACGCATTATCTCCTCTAGTCATTGACGTTGAAGCCGGAAGCAGAAAGGAGATAGGCTGGTTGCTTA
AAAATCTCAAGTCGAAGGGGACGGCCCTGATTACTGTGGAGGAGCCTTTAAGACAGAATGCCGATTTGCTGTTGCTTTTG
GCTGATAGCGTTATAAGCCTCAGATACACCGGTTACGGCGGTCCTTTCAGCAGGACGCTGAGAGTTCTAAAGCATAGAAT
GTCCTGGCACGGAGATGGGGTTTATCCCTTCTACATTATTGAGGGTGCTGGGATAGTTATTGACGAAAAGAGGGGAGAAG
GGTTTGAATTAGAGGAGGAGATGAACCTGCCCGAAAGGGCCAAGGAAAAAATCGCAGAGATGTGTAAAAAGGGCACTCTC
ACCTTAGAGGATATTAGCAAAATAAAGCGGAGAATACCATGA

Upstream 100 bases:

>100_bases
TAAATGTTTAAAAGCCCTCCAAAGCTTGCTACCTGCTAATGATGAAAAAGGTTGCAAAGGCTTGAAAATATATTTATACT
TCTTAAACTAACTTCAATTA

Downstream 100 bases:

>100_bases
GGGCGGACTTGCTTGAGCTCATAGAGCCCTTCAGAACTGACGAATCCGTTCTCTTTGCGGTAGTTTACAGTATAGACGGC
ACGGTTCTTGCCAGCCACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MLERIKSGVIGLDEILGGGFIKNTVNAVVGGMGCGKTIFCMNYLLEGLENGEKCMYASPDLDVDEFLRLAESMHWDFSKY
IDNGQLNIMTVVAEDAASFIKMAFEYDRVAVDALSPLVIDVEAGSRKEIGWLLKNLKSKGTALITVEEPLRQNADLLLLL
ADSVISLRYTGYGGPFSRTLRVLKHRMSWHGDGVYPFYIIEGAGIVIDEKRGEGFELEEEMNLPERAKEKIAEMCKKGTL
TLEDISKIKRRIP

Sequences:

>Translated_253_residues
MLERIKSGVIGLDEILGGGFIKNTVNAVVGGMGCGKTIFCMNYLLEGLENGEKCMYASPDLDVDEFLRLAESMHWDFSKY
IDNGQLNIMTVVAEDAASFIKMAFEYDRVAVDALSPLVIDVEAGSRKEIGWLLKNLKSKGTALITVEEPLRQNADLLLLL
ADSVISLRYTGYGGPFSRTLRVLKHRMSWHGDGVYPFYIIEGAGIVIDEKRGEGFELEEEMNLPERAKEKIAEMCKKGTL
TLEDISKIKRRIP
>Mature_253_residues
MLERIKSGVIGLDEILGGGFIKNTVNAVVGGMGCGKTIFCMNYLLEGLENGEKCMYASPDLDVDEFLRLAESMHWDFSKY
IDNGQLNIMTVVAEDAASFIKMAFEYDRVAVDALSPLVIDVEAGSRKEIGWLLKNLKSKGTALITVEEPLRQNADLLLLL
ADSVISLRYTGYGGPFSRTLRVLKHRMSWHGDGVYPFYIIEGAGIVIDEKRGEGFELEEEMNLPERAKEKIAEMCKKGTL
TLEDISKIKRRIP

Specific function: Core component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by actin

COG id: COG0467

COG function: function code T; RecA-superfamily ATPases implicated in signal transduction

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 kaiC domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014774
- InterPro:   IPR013503
- InterPro:   IPR010624 [H]

Pfam domain/function: PF06745 KaiC [H]

EC number: =2.7.11.1 [H]

Molecular weight: Translated: 28205; Mature: 28205

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51146 KAIC ; PS50162 RECA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLERIKSGVIGLDEILGGGFIKNTVNAVVGGMGCGKTIFCMNYLLEGLENGEKCMYASPD
CCHHHHHCCCCHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECCC
LDVDEFLRLAESMHWDFSKYIDNGQLNIMTVVAEDAASFIKMAFEYDRVAVDALSPLVID
CCHHHHHHHHHHHCCCHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEE
VEAGSRKEIGWLLKNLKSKGTALITVEEPLRQNADLLLLLADSVISLRYTGYGGPFSRTL
ECCCCCHHHHHHHHHHHCCCCEEEEECHHHHCCCCEEEEEECCCEEEEECCCCCCHHHHH
RVLKHRMSWHGDGVYPFYIIEGAGIVIDEKRGEGFELEEEMNLPERAKEKIAEMCKKGTL
HHHHHHHHCCCCCCEEEEEEECCCEEEECCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCC
TLEDISKIKRRIP
CHHHHHHHHHHCC
>Mature Secondary Structure
MLERIKSGVIGLDEILGGGFIKNTVNAVVGGMGCGKTIFCMNYLLEGLENGEKCMYASPD
CCHHHHHCCCCHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECCC
LDVDEFLRLAESMHWDFSKYIDNGQLNIMTVVAEDAASFIKMAFEYDRVAVDALSPLVID
CCHHHHHHHHHHHCCCHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEE
VEAGSRKEIGWLLKNLKSKGTALITVEEPLRQNADLLLLLADSVISLRYTGYGGPFSRTL
ECCCCCHHHHHHHHHHHCCCCEEEEECHHHHCCCCEEEEEECCCEEEEECCCCCCHHHHH
RVLKHRMSWHGDGVYPFYIIEGAGIVIDEKRGEGFELEEEMNLPERAKEKIAEMCKKGTL
HHHHHHHHCCCCCCEEEEEEECCCEEEECCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCC
TLEDISKIKRRIP
CHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12477935 [H]