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The map label for this gene is cdhC

Identifier: 11497991

GI number: 11497991

Start: 343437

End: 345011

Strand: Reverse

Name: cdhC

Synonym: AF0379

Alternate gene names: 11497991

Gene position: 345011-343437 (Counterclockwise)

Preceding gene: 11497992

Following gene: 11497990

Centisome position: 15.84

GC content: 53.08

Gene sequence:

>1575_bases
ATGGTTGAAAGAAAAAGAATAGAGATTCCGGAGGGTGTTAAAGTCAAGGAGAGCGTTGGAGAGGAAGCAGAGTTTCCATT
TGACATCTCTCCGATGTACGAGGGAGAGAGAATCAGGAAGGGAGACATGTACGTTGAGCTTGGAGGTCCAACGCAGCCTG
GGTTCGAGCTTGTCATGGCTCTGCCGATGGATCAGGTAGAGGACATGAAGGTCACGCTCATCGGCCCGGATCTGGACGAG
ATGGAGGAAGGACAGGCATATCCCTACGCGATGATTTACTACATCGCCGGTGAGATGGTAGAGACTGATCTTGAGCCTGT
TATCGAGAGAAGAAACCACGACTTCCAGAACTACATCGAGGGGTACATGCACCTCAACCAGAGATACGACATCTGGATCA
GAATCGGAAAGAATGCGATCAAGAAGGGACTGAAAAGCCTGATTCAGATTGCAAAAGCCACAATGATGCTCTACAAGAAC
GAGCTCCCCTTCATCGAGAAGATTGAGGCTGTTTACATCACCGACAAGGATCTGGTTGAAAAGCTGCTCAACGAGCTTGC
AATGCCGATTTTCGAGGAGAGAGACGCGAGAGTTGAGGCTTTGAGCGATGAGGACGTTGACGAGTTCTACTCATGCACCC
TCTGCCAGAGCTTCGCCCCAACAAACGTCTGCATTGTCAGCCCAGACAGACCCTCGCTCTGCGGAGCTATAACCTGGTTC
GATGGTAGAGCGGCAGCAAAGGTTGACCCCGAGGGGCCAAACAGAGCGGTGCCGAAGGGAGAGCTGCTTGACCCGATCGG
CGGTGAGTACAGCGGTGTTAACGAGTTTGCAAAGCAGGAGAGCGGTGGAGAGTACGAGAGGATAAAGCTGCACAGCTTCT
TCGAGTATCCGCACACAAGCTGTGGTTGCTTTGAGGTTATAGGTTTCTACATGCCCGAAGTTGACGGAATTGGCTGGGTG
CACAGAGGCTACGCTGAACCCGCACCCAACGGTTTGACGTTCTCAACAATGGCCGGTCAGACTGGTGGTGGAAAGCAGGT
CGTTGGGTTCCTTGGCATCGGTATAGCCTACTTCAGAAGCAAGAAGTTCATTCAGGCCGATGGTGGGTGGTACAGGACGG
TCTGGATGCCGAAGGAGCTGAAAGAGAGAGTGGCAAAGTACATCCCGGACGACATCAGGGACAAGATTGCAACCGAGGAG
GATGCCAAGACCCTTGATGAGCTGAGGGAGTTCCTCAAGAAAGTTGACCACCCCGTTGTCAAGGGTGTTGTAAGGCCGGT
TGACGGCAAGAAGATTACCAACGGATGGGTTGAGGAAGAGGAAGAAGAGGCTGAAGAGGTCGCTGAGGAGGCTGCTGCTG
AGGCAGCACCAGCAGCTCAGCCAGCACAAGCAGCTCAGCCGATGGCAATGCAGCCAATGCCGATGCAGATGCCAGGATTC
CAGCTCCCCGCCCTTCAGATGCCTGCAGCGTCAGCAGCTCCGGCAGGTGTCAAGCTTGTAATCAAGGACGCGAAGATTAC
CATCGAAAAGGTCATCATCAAGAAGGCAGAGAAGGAGAAGAAGGGTGGGAAGTAA

Upstream 100 bases:

>100_bases
GTAGGTTGGCGGAAAGGTGAAAAGCGATAAATACAAATAAACAAAAATTGTTGTTTGGGTATAGCTGGAGAGTTTAGTTT
AATTTGGAGGTGAGCAAGAT

Downstream 100 bases:

>100_bases
TGGAGGAGGAAGTGAAGAAGGTTAAACTCATCCTTAAAGGAGCTCAGATTCATATCCCAGAGCTGATAATAGAGGAAGAA
GAATGACAGTAATCGCGGTG

Product: acetyl-CoA decarbonylase/synthase complex subunit beta

Products: CO2; AH2

Alternate protein names: ACDS complex subunit beta; ACDS complex acyltransferase

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MVERKRIEIPEGVKVKESVGEEAEFPFDISPMYEGERIRKGDMYVELGGPTQPGFELVMALPMDQVEDMKVTLIGPDLDE
MEEGQAYPYAMIYYIAGEMVETDLEPVIERRNHDFQNYIEGYMHLNQRYDIWIRIGKNAIKKGLKSLIQIAKATMMLYKN
ELPFIEKIEAVYITDKDLVEKLLNELAMPIFEERDARVEALSDEDVDEFYSCTLCQSFAPTNVCIVSPDRPSLCGAITWF
DGRAAAKVDPEGPNRAVPKGELLDPIGGEYSGVNEFAKQESGGEYERIKLHSFFEYPHTSCGCFEVIGFYMPEVDGIGWV
HRGYAEPAPNGLTFSTMAGQTGGGKQVVGFLGIGIAYFRSKKFIQADGGWYRTVWMPKELKERVAKYIPDDIRDKIATEE
DAKTLDELREFLKKVDHPVVKGVVRPVDGKKITNGWVEEEEEEAEEVAEEAAAEAAPAAQPAQAAQPMAMQPMPMQMPGF
QLPALQMPAASAAPAGVKLVIKDAKITIEKVIIKKAEKEKKGGK

Sequences:

>Translated_524_residues
MVERKRIEIPEGVKVKESVGEEAEFPFDISPMYEGERIRKGDMYVELGGPTQPGFELVMALPMDQVEDMKVTLIGPDLDE
MEEGQAYPYAMIYYIAGEMVETDLEPVIERRNHDFQNYIEGYMHLNQRYDIWIRIGKNAIKKGLKSLIQIAKATMMLYKN
ELPFIEKIEAVYITDKDLVEKLLNELAMPIFEERDARVEALSDEDVDEFYSCTLCQSFAPTNVCIVSPDRPSLCGAITWF
DGRAAAKVDPEGPNRAVPKGELLDPIGGEYSGVNEFAKQESGGEYERIKLHSFFEYPHTSCGCFEVIGFYMPEVDGIGWV
HRGYAEPAPNGLTFSTMAGQTGGGKQVVGFLGIGIAYFRSKKFIQADGGWYRTVWMPKELKERVAKYIPDDIRDKIATEE
DAKTLDELREFLKKVDHPVVKGVVRPVDGKKITNGWVEEEEEEAEEVAEEAAAEAAPAAQPAQAAQPMAMQPMPMQMPGF
QLPALQMPAASAAPAGVKLVIKDAKITIEKVIIKKAEKEKKGGK
>Mature_524_residues
MVERKRIEIPEGVKVKESVGEEAEFPFDISPMYEGERIRKGDMYVELGGPTQPGFELVMALPMDQVEDMKVTLIGPDLDE
MEEGQAYPYAMIYYIAGEMVETDLEPVIERRNHDFQNYIEGYMHLNQRYDIWIRIGKNAIKKGLKSLIQIAKATMMLYKN
ELPFIEKIEAVYITDKDLVEKLLNELAMPIFEERDARVEALSDEDVDEFYSCTLCQSFAPTNVCIVSPDRPSLCGAITWF
DGRAAAKVDPEGPNRAVPKGELLDPIGGEYSGVNEFAKQESGGEYERIKLHSFFEYPHTSCGCFEVIGFYMPEVDGIGWV
HRGYAEPAPNGLTFSTMAGQTGGGKQVVGFLGIGIAYFRSKKFIQADGGWYRTVWMPKELKERVAKYIPDDIRDKIATEE
DAKTLDELREFLKKVDHPVVKGVVRPVDGKKITNGWVEEEEEEAEEVAEEAAAEAAPAAQPAQAAQPMAMQPMPMQMPGF
QLPALQMPAASAAPAGVKLVIKDAKITIEKVIIKKAEKEKKGGK

Specific function: Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2)

COG id: COG1614

COG function: function code C; CO dehydrogenase/acetyl-CoA synthase beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CdhC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ACDB_ARCFU (O29868)

Other databases:

- EMBL:   AE000782
- PIR:   C69297
- RefSeq:   NP_069215.1
- ProteinModelPortal:   O29868
- SMR:   O29868
- GeneID:   1483594
- GenomeReviews:   AE000782_GR
- KEGG:   afu:AF0379
- NMPDR:   fig|224325.1.peg.374
- TIGR:   AF_0379
- HOGENOM:   HBG456963
- OMA:   DRPALCG
- ProtClustDB:   PRK04456
- BioCyc:   AFUL224325:AF_0379-MONOMER
- HAMAP:   MF_01138
- InterPro:   IPR004461
- InterPro:   IPR011254
- TIGRFAMs:   TIGR00316

Pfam domain/function: PF03598 CdhC; SSF56821 Prismane_like

EC number: 1.2.99.2

Molecular weight: Translated: 58577; Mature: 58577

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVERKRIEIPEGVKVKESVGEEAEFPFDISPMYEGERIRKGDMYVELGGPTQPGFELVMA
CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEECCCEEEEECCCCCCCHHEEEE
LPMDQVEDMKVTLIGPDLDEMEEGQAYPYAMIYYIAGEMVETDLEPVIERRNHDFQNYIE
CCCCCCCCCEEEEECCCHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHH
GYMHLNQRYDIWIRIGKNAIKKGLKSLIQIAKATMMLYKNELPFIEKIEAVYITDKDLVE
HHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEEECCHHHHH
KLLNELAMPIFEERDARVEALSDEDVDEFYSCTLCQSFAPTNVCIVSPDRPSLCGAITWF
HHHHHHCCHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEE
DGRAAAKVDPEGPNRAVPKGELLDPIGGEYSGVNEFAKQESGGEYERIKLHSFFEYPHTS
CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEHHHCCCCCC
CGCFEVIGFYMPEVDGIGWVHRGYAEPAPNGLTFSTMAGQTGGGKQVVGFLGIGIAYFRS
CCHHHHHHHHCCCCCCCCHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHC
KKFIQADGGWYRTVWMPKELKERVAKYIPDDIRDKIATEEDAKTLDELREFLKKVDHPVV
CCEEEECCCEEEEEECCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHH
KGVVRPVDGKKITNGWVEEEEEEAEEVAEEAAAEAAPAAQPAQAAQPMAMQPMPMQMPGF
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCC
QLPALQMPAASAAPAGVKLVIKDAKITIEKVIIKKAEKEKKGGK
CCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVERKRIEIPEGVKVKESVGEEAEFPFDISPMYEGERIRKGDMYVELGGPTQPGFELVMA
CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEECCCEEEEECCCCCCCHHEEEE
LPMDQVEDMKVTLIGPDLDEMEEGQAYPYAMIYYIAGEMVETDLEPVIERRNHDFQNYIE
CCCCCCCCCEEEEECCCHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHH
GYMHLNQRYDIWIRIGKNAIKKGLKSLIQIAKATMMLYKNELPFIEKIEAVYITDKDLVE
HHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEEECCHHHHH
KLLNELAMPIFEERDARVEALSDEDVDEFYSCTLCQSFAPTNVCIVSPDRPSLCGAITWF
HHHHHHCCHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEE
DGRAAAKVDPEGPNRAVPKGELLDPIGGEYSGVNEFAKQESGGEYERIKLHSFFEYPHTS
CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEHHHCCCCCC
CGCFEVIGFYMPEVDGIGWVHRGYAEPAPNGLTFSTMAGQTGGGKQVVGFLGIGIAYFRS
CCHHHHHHHHCCCCCCCCHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHC
KKFIQADGGWYRTVWMPKELKERVAKYIPDDIRDKIATEEDAKTLDELREFLKKVDHPVV
CCEEEECCCEEEEEECCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHH
KGVVRPVDGKKITNGWVEEEEEEAEEVAEEAAAEAAPAAQPAQAAQPMAMQPMPMQMPGF
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCC
QLPALQMPAASAAPAGVKLVIKDAKITIEKVIIKKAEKEKKGGK
CCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: CO; H2O; A

Specific reaction: CO + H2O + A = CO2 + AH2

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9389475; 9575239