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Identifier: 11497963

GI number: 11497963

Start: 319309

End: 319989

Strand: Reverse

Name: Not Available

Synonym: AF0351

Alternate gene names: 11497963

Gene position: 319989-319309 (Counterclockwise)

Preceding gene: 11497964

Following gene: 11497958

Centisome position: 14.69

GC content: 49.34

Gene sequence:

>681_bases
ATGCTGAAGACGGGGATTGAGGGACTGGATGCAATTCTGGGTGGGGGGATTCCCGAGGGGCATATTGTTGCGGTTGTTGG
CCAGTACGGAACCGGCAAGACGACGCTGGGTCTGCACTTCATCTACGAGGGCTTGAAGAATGGGGAGGCGTGCATGATTA
TTAGCTTTGACGAGGATGAGGAGAGCATAATTGGGGATGCTAAGAGCGTGGGAATGGACTTGACGGCCTTTGGAGACAAA
GTCCACATAGTCAGGCTGGAGGCGTCGGAGGTTAAAAAAAGCCTCGAAAAGCTGGAGAGCGATTTACCTGAGATCGTCAG
AAGTTTAGGAGTTAGTAGAATGCTGGTTGATTCCATAAGCGTTCTCGAGACGCTTTTCGATGATGCAGGCAGATACAGCA
TGCTCGCAGCTTTCAGAAAAATGCTCAAGGAAAACGGCATTACCGCAATAATTACAAGCGAGGCGGACAAATACCAGCCG
AACACCTCGAAGTACGGAATTCTGGAGTACATCTGCGATGGTATGATCAGCCTGAAGGTTGTCAGGAAGAGCGAGCTCGA
TGAGCCCACCTTGGGGCTTGAGGTCGTTAAAATGAGGAGAGTCAAGCATTCAAGAAAGCCCAAGCCATACATCATCACCG
ATTCTGGAATAGTTGTTTACGAAGAAGCGGAGATTTTTTAA

Upstream 100 bases:

>100_bases
CAAGATAGAAAAGGAGAGAATTGTTAAATACTCAGTAAAAATCGATCCTGTAATAGGCTTCACGATTTCGAGGATCATGA
GGGTCATGTGAGGTGGTCGG

Downstream 100 bases:

>100_bases
GCGACCAAAATTTTCTTTATCCGCTACGTAAACGCAATTTAAGCGGGGGTTGCCGAGCGGCCAAAGGCGCTGGATTTAGG
GTCCAGTCCCGTAGGGGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MLKTGIEGLDAILGGGIPEGHIVAVVGQYGTGKTTLGLHFIYEGLKNGEACMIISFDEDEESIIGDAKSVGMDLTAFGDK
VHIVRLEASEVKKSLEKLESDLPEIVRSLGVSRMLVDSISVLETLFDDAGRYSMLAAFRKMLKENGITAIITSEADKYQP
NTSKYGILEYICDGMISLKVVRKSELDEPTLGLEVVKMRRVKHSRKPKPYIITDSGIVVYEEAEIF

Sequences:

>Translated_226_residues
MLKTGIEGLDAILGGGIPEGHIVAVVGQYGTGKTTLGLHFIYEGLKNGEACMIISFDEDEESIIGDAKSVGMDLTAFGDK
VHIVRLEASEVKKSLEKLESDLPEIVRSLGVSRMLVDSISVLETLFDDAGRYSMLAAFRKMLKENGITAIITSEADKYQP
NTSKYGILEYICDGMISLKVVRKSELDEPTLGLEVVKMRRVKHSRKPKPYIITDSGIVVYEEAEIF
>Mature_226_residues
MLKTGIEGLDAILGGGIPEGHIVAVVGQYGTGKTTLGLHFIYEGLKNGEACMIISFDEDEESIIGDAKSVGMDLTAFGDK
VHIVRLEASEVKKSLEKLESDLPEIVRSLGVSRMLVDSISVLETLFDDAGRYSMLAAFRKMLKENGITAIITSEADKYQP
NTSKYGILEYICDGMISLKVVRKSELDEPTLGLEVVKMRRVKHSRKPKPYIITDSGIVVYEEAEIF

Specific function: Can Catalyze The Hydrolysis Of ATP In The Presence Of Single-Stranded DNA, The ATP-Dependent Uptake Of Single-Stranded DNA By Duplex DNA, And The ATP-Dependent Hybridization Of Homologous Single-Stranded DNAs. It Interacts With Lexa Causing Its Activatio

COG id: COG0467

COG function: function code T; RecA-superfamily ATPases implicated in signal transduction

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 kaiC domains [H]

Homologues:

None

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014774
- InterPro:   IPR010624 [H]

Pfam domain/function: PF06745 KaiC [H]

EC number: NA

Molecular weight: Translated: 24821; Mature: 24821

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS51146 KAIC ; PS50162 RECA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKTGIEGLDAILGGGIPEGHIVAVVGQYGTGKTTLGLHFIYEGLKNGEACMIISFDEDE
CCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCC
ESIIGDAKSVGMDLTAFGDKVHIVRLEASEVKKSLEKLESDLPEIVRSLGVSRMLVDSIS
HHHHCCHHHHCCEEEECCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
VLETLFDDAGRYSMLAAFRKMLKENGITAIITSEADKYQPNTSKYGILEYICDGMISLKV
HHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHCCHHHEEE
VRKSELDEPTLGLEVVKMRRVKHSRKPKPYIITDSGIVVYEEAEIF
HHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCC
>Mature Secondary Structure
MLKTGIEGLDAILGGGIPEGHIVAVVGQYGTGKTTLGLHFIYEGLKNGEACMIISFDEDE
CCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCC
ESIIGDAKSVGMDLTAFGDKVHIVRLEASEVKKSLEKLESDLPEIVRSLGVSRMLVDSIS
HHHHCCHHHHCCEEEECCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
VLETLFDDAGRYSMLAAFRKMLKENGITAIITSEADKYQPNTSKYGILEYICDGMISLKV
HHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHCCHHHEEE
VRKSELDEPTLGLEVVKMRRVKHSRKPKPYIITDSGIVVYEEAEIF
HHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]