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Identifier: 11497678

GI number: 11497678

Start: 61625

End: 62149

Strand: Reverse

Name: Not Available

Synonym: AF0058

Alternate gene names: NA

Gene position: 62149-61625 (Counterclockwise)

Preceding gene: 11497679

Following gene: 11497677

Centisome position: 2.85

GC content: 48.19

Gene sequence:

>525_bases
ATGGCGTTTAGACAACCAAATACTAAGGAACTGAAAGTAATAAGAAAAGCCCTCAGCTACTACGGCTCTGGCGATTTTTT
GAGCCATTACGCTCTGCTTGTTAAGGAAGGTGAGAAGAAGGAGGTTTACGGAGTTTCCAAGGAGCTTTACGGCGTGATTG
GAGAGCTTAATCCGCACTACGCAGGAGTCAAAATTGGGGAGGTGGGGAGAAGGTTCAGGTTCTCCCTTGAAGGTACGTTC
TGGCTTCTGAGAAACAGCAGGAACAGAGTGTGGGTGAATGAACGGGGGGAGATGCTGTTCCTCTACGGCAGGGACATTTT
CGCAGGTTCAGTTGAGAGAGCCTCTGAATTCGGGGAAAACTCAATTGTTTTCGTTTGCAACAGATTCGACGACGTTCTTG
GAATAGGGAGAAGCAGGCATTCATCTGACGAGCTGAGCAATCTTCCCGAAGATAAGGTGTTTGTGGAGAACCTGGTTGAC
AGGGGGGAGTACCTGAGGCATCAGAAAACCTACCTTTCCTTTTAG

Upstream 100 bases:

>100_bases
AGATGGAGGGTAGCATGGAGGTTGGGGAGAGCGTGATTGTCAACACGGTTGAGGCATTCAGGATTGATGGAGATTACAGC
AACATTATCAAGGCGATTAA

Downstream 100 bases:

>100_bases
TGGAAAACGTTTAAATGCAATAAGACCACGTTAATCGCATGGGCAGAACGAAGAAAGTGAGGTCAGCAGGCAGGTTCGGA
CCAAGATATGGCCTCAGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MAFRQPNTKELKVIRKALSYYGSGDFLSHYALLVKEGEKKEVYGVSKELYGVIGELNPHYAGVKIGEVGRRFRFSLEGTF
WLLRNSRNRVWVNERGEMLFLYGRDIFAGSVERASEFGENSIVFVCNRFDDVLGIGRSRHSSDELSNLPEDKVFVENLVD
RGEYLRHQKTYLSF

Sequences:

>Translated_174_residues
MAFRQPNTKELKVIRKALSYYGSGDFLSHYALLVKEGEKKEVYGVSKELYGVIGELNPHYAGVKIGEVGRRFRFSLEGTF
WLLRNSRNRVWVNERGEMLFLYGRDIFAGSVERASEFGENSIVFVCNRFDDVLGIGRSRHSSDELSNLPEDKVFVENLVD
RGEYLRHQKTYLSF
>Mature_173_residues
AFRQPNTKELKVIRKALSYYGSGDFLSHYALLVKEGEKKEVYGVSKELYGVIGELNPHYAGVKIGEVGRRFRFSLEGTFW
LLRNSRNRVWVNERGEMLFLYGRDIFAGSVERASEFGENSIVFVCNRFDDVLGIGRSRHSSDELSNLPEDKVFVENLVDR
GEYLRHQKTYLSF

Specific function: Unknown

COG id: COG1374

COG function: function code J; Protein involved in ribosomal biogenesis, contains PUA domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PUA domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y058_ARCFU (O30178)

Other databases:

- EMBL:   AE000782
- PIR:   B69257
- RefSeq:   NP_068899.1
- ProteinModelPortal:   O30178
- SMR:   O30178
- GeneID:   1483267
- GenomeReviews:   AE000782_GR
- KEGG:   afu:AF0058
- NMPDR:   fig|224325.1.peg.58
- TIGR:   AF_0058
- OMA:   ITWADES
- ProtClustDB:   CLSK782519
- BioCyc:   AFUL224325:AF_0058-MONOMER
- InterPro:   IPR002478
- InterPro:   IPR015947
- InterPro:   IPR005155
- SMART:   SM00359

Pfam domain/function: PF03657 UPF0113; SSF88697 PUA-like

EC number: NA

Molecular weight: Translated: 20116; Mature: 19985

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: PS50890 PUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFRQPNTKELKVIRKALSYYGSGDFLSHYALLVKEGEKKEVYGVSKELYGVIGELNPHY
CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC
AGVKIGEVGRRFRFSLEGTFWLLRNSRNRVWVNERGEMLFLYGRDIFAGSVERASEFGEN
CCEEHHCCCCEEEEEECCEEEEEECCCCEEEEECCCCEEEEECCCCHHCCHHHHHHCCCC
SIVFVCNRFDDVLGIGRSRHSSDELSNLPEDKVFVENLVDRGEYLRHQKTYLSF
CEEEEECCHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AFRQPNTKELKVIRKALSYYGSGDFLSHYALLVKEGEKKEVYGVSKELYGVIGELNPHY
CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC
AGVKIGEVGRRFRFSLEGTFWLLRNSRNRVWVNERGEMLFLYGRDIFAGSVERASEFGEN
CCEEHHCCCCEEEEEECCEEEEEECCCCEEEEECCCCEEEEECCCCHHCCHHHHHHCCCC
SIVFVCNRFDDVLGIGRSRHSSDELSNLPEDKVFVENLVDRGEYLRHQKTYLSF
CEEEEECCHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475