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Identifier: 15679796

GI number: 15679796

Start: 1651351

End: 1652250

Strand: Direct

Name: Not Available

Synonym: MTH1808

Alternate gene names: 15679796

Gene position: 1651351-1652250 (Clockwise)

Preceding gene: 15679795

Following gene: 15679797

Centisome position: 94.29

GC content: 48.22

Gene sequence:

>900_bases
ATGGATGATTTTTACTGTATAAACCTATTAATGGGTGATATAACTTTGATTGACGGGAAAATTTACTCAATATTTAAGCG
TGGAAGCAAAACATACTTCTACAGCACGCTATTCTTCCCAAAGGATGTCAGGAGAGACGTTTTTATACTCTACAGCTTCC
TTCGAAAGGCCGATGACTACGTTGACCGGGTACCGCAGGATACTGATGGGTTCTATGAATTTGTGGAAAGGTACCGGAGA
GCATACTCCGGTGAAATCACAGGTGACGTGGTGGTTGATTCCTTCGTGGAGCTTTCAGAGAGAAAAAATTTTGAAGATGA
GTGGACAGAGGCCTTCCTGAGGTCCATGGAGATGGATATAACAGTATCATCCTACAGTACAATGTCTGCCCTCGAAGAGT
ACCTCCTTGGTTCATCAGAGGTCGTGGGGCTCTTCATGGCATCCATAATGGGCCTCCACACGGATTCATACCACCATGCA
AGGTACCTTGGAAGGGCCATGCAGTACGTTAACTTCATAAGGGACATTGCAGAGGACATTGAGCTTGGAAGGCTATACTT
TCCGATGGACGAACTTGAAAGGTTCGGACTCCAATCCCTTGATCCTGATGAGATAAGGGGGAGGGAGGATAATTTCCGGT
CATTTCTGAGGGCCCAGATAGACATCTACAGGGACTGGCAGAGGACAGCTGAGAGGGGCTACCGGTACATCCCCTACCGT
TACCTGGTACCCATAAAGACAGCGGCTGACATGTACATGTGGACATCAAGGATCATTGAAAGGGACCCCATGATAGTCTA
CAGCCGAAAGGTGAAGCCGTCAGGGGGCCGTGTGGTATCCGGGGCGGTATTTAACATGTTCCGCCTCATGGGTCCTCTCA
GGGTCAGCAGAGGTCCATGA

Upstream 100 bases:

>100_bases
ACGGGACATTACACCCATCCAGGTATAGGCGTGCCGATGACACTTATCTCCTCCCAGATAGTCTGCAACGAGATGATGGA
TGATATGGGAATTAATCCGG

Downstream 100 bases:

>100_bases
CCTTCGGGGCAGTGTTCAGATGAATGTTCTTGGAGACTATGCGAGATTTCTCTTCAGGATATCCAGGTTCAGGTTCTGGA
TCTACACAGGCGGAACCTAT

Product: phytoene synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MDDFYCINLLMGDITLIDGKIYSIFKRGSKTYFYSTLFFPKDVRRDVFILYSFLRKADDYVDRVPQDTDGFYEFVERYRR
AYSGEITGDVVVDSFVELSERKNFEDEWTEAFLRSMEMDITVSSYSTMSALEEYLLGSSEVVGLFMASIMGLHTDSYHHA
RYLGRAMQYVNFIRDIAEDIELGRLYFPMDELERFGLQSLDPDEIRGREDNFRSFLRAQIDIYRDWQRTAERGYRYIPYR
YLVPIKTAADMYMWTSRIIERDPMIVYSRKVKPSGGRVVSGAVFNMFRLMGPLRVSRGP

Sequences:

>Translated_299_residues
MDDFYCINLLMGDITLIDGKIYSIFKRGSKTYFYSTLFFPKDVRRDVFILYSFLRKADDYVDRVPQDTDGFYEFVERYRR
AYSGEITGDVVVDSFVELSERKNFEDEWTEAFLRSMEMDITVSSYSTMSALEEYLLGSSEVVGLFMASIMGLHTDSYHHA
RYLGRAMQYVNFIRDIAEDIELGRLYFPMDELERFGLQSLDPDEIRGREDNFRSFLRAQIDIYRDWQRTAERGYRYIPYR
YLVPIKTAADMYMWTSRIIERDPMIVYSRKVKPSGGRVVSGAVFNMFRLMGPLRVSRGP
>Mature_299_residues
MDDFYCINLLMGDITLIDGKIYSIFKRGSKTYFYSTLFFPKDVRRDVFILYSFLRKADDYVDRVPQDTDGFYEFVERYRR
AYSGEITGDVVVDSFVELSERKNFEDEWTEAFLRSMEMDITVSSYSTMSALEEYLLGSSEVVGLFMASIMGLHTDSYHHA
RYLGRAMQYVNFIRDIAEDIELGRLYFPMDELERFGLQSLDPDEIRGREDNFRSFLRAQIDIYRDWQRTAERGYRYIPYR
YLVPIKTAADMYMWTSRIIERDPMIVYSRKVKPSGGRVVSGAVFNMFRLMGPLRVSRGP

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 35287; Mature: 35287

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS01045 SQUALEN_PHYTOEN_SYN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDFYCINLLMGDITLIDGKIYSIFKRGSKTYFYSTLFFPKDVRRDVFILYSFLRKADDY
CCCCEEHHHHHCCHHEECCHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHH
VDRVPQDTDGFYEFVERYRRAYSGEITGDVVVDSFVELSERKNFEDEWTEAFLRSMEMDI
HHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCE
TVSSYSTMSALEEYLLGSSEVVGLFMASIMGLHTDSYHHARYLGRAMQYVNFIRDIAEDI
EECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ELGRLYFPMDELERFGLQSLDPDEIRGREDNFRSFLRAQIDIYRDWQRTAERGYRYIPYR
HHCCEECCHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCEE
YLVPIKTAADMYMWTSRIIERDPMIVYSRKVKPSGGRVVSGAVFNMFRLMGPLRVSRGP
EEEEHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEHHHHHHHHHHHCCHHCCCCC
>Mature Secondary Structure
MDDFYCINLLMGDITLIDGKIYSIFKRGSKTYFYSTLFFPKDVRRDVFILYSFLRKADDY
CCCCEEHHHHHCCHHEECCHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHH
VDRVPQDTDGFYEFVERYRRAYSGEITGDVVVDSFVELSERKNFEDEWTEAFLRSMEMDI
HHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCE
TVSSYSTMSALEEYLLGSSEVVGLFMASIMGLHTDSYHHARYLGRAMQYVNFIRDIAEDI
EECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ELGRLYFPMDELERFGLQSLDPDEIRGREDNFRSFLRAQIDIYRDWQRTAERGYRYIPYR
HHCCEECCHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCEE
YLVPIKTAADMYMWTSRIIERDPMIVYSRKVKPSGGRVVSGAVFNMFRLMGPLRVSRGP
EEEEHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEHHHHHHHHHHHCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8018713; 8905231 [H]