| Definition | Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome. |
|---|---|
| Accession | NC_000916 |
| Length | 1,751,377 |
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Identifier: 15679576
GI number: 15679576
Start: 1447960
End: 1448373
Strand: Direct
Name: Not Available
Synonym: MTH1581
Alternate gene names: NA
Gene position: 1447960-1448373 (Clockwise)
Preceding gene: 15679575
Following gene: 15679578
Centisome position: 82.68
GC content: 50.72
Gene sequence:
>414_bases ATGGGAACCCTTCTGGATGACAGGAAACTGCTCATAATATCAGCCATGCTGGGACTCGCCGGCTTCACCGGAATGATAAT CTCTTCGGCGACCCTCACACCGGACCCTATTAAAATAGCTCAGATTGACAGGGGCATGATTGACAGGAAGGTTACGGTCG AGGGCACAGTGGCTGATGTCCGCGAATCAGAACACTCGGGAATCATATTCCTGAAAATAAATGATGGCACCGGCACAATA ACGGCTGTTATATTCGAATCAACAGCAGAGACAATAAAGAGGAATGGCCCTGCCCCCATACTGCTGAAGGGGATGAGAGT GCAGGTAACCGGGAGGGTGAAGGAGTACAGGGGATTACTTGAGGTGGCCGTAGAGGAACCTTCAGGTTTGAGGCCTCTCC CTGGTTATGGTTAA
Upstream 100 bases:
>100_bases ATGTTGATACAGTTGGACGTATAGAGTCCCTCTTCCAGTCCGGACAGCCAGACCAACCAGGTTAGTAATATTTAAATAGT ACAAAGTAATAATTACTTTT
Downstream 100 bases:
>100_bases TCTTCATCAAGGTAAAGTGGCTTTAATCTCCCTGTGTTTATGTCTATTATCAGTCCGTGGACCCCTATGGATTCTGGTAT GAGGGGGGATGACTTCAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MGTLLDDRKLLIISAMLGLAGFTGMIISSATLTPDPIKIAQIDRGMIDRKVTVEGTVADVRESEHSGIIFLKINDGTGTI TAVIFESTAETIKRNGPAPILLKGMRVQVTGRVKEYRGLLEVAVEEPSGLRPLPGYG
Sequences:
>Translated_137_residues MGTLLDDRKLLIISAMLGLAGFTGMIISSATLTPDPIKIAQIDRGMIDRKVTVEGTVADVRESEHSGIIFLKINDGTGTI TAVIFESTAETIKRNGPAPILLKGMRVQVTGRVKEYRGLLEVAVEEPSGLRPLPGYG >Mature_136_residues GTLLDDRKLLIISAMLGLAGFTGMIISSATLTPDPIKIAQIDRGMIDRKVTVEGTVADVRESEHSGIIFLKINDGTGTIT AVIFESTAETIKRNGPAPILLKGMRVQVTGRVKEYRGLLEVAVEEPSGLRPLPGYG
Specific function: Unknown
COG id: COG4085
COG function: function code R; Predicted RNA-binding protein, contains TRAM domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14662; Mature: 14531
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTLLDDRKLLIISAMLGLAGFTGMIISSATLTPDPIKIAQIDRGMIDRKVTVEGTVADV CCCCCCCCHHHHHHHHHHHHCHHHHHEECCCCCCCCEEEEECCCCCCCCEEEECCCHHHH RESEHSGIIFLKINDGTGTITAVIFESTAETIKRNGPAPILLKGMRVQVTGRVKEYRGLL CCCCCCCEEEEEEECCCCEEEEEEEHHHHHHHHCCCCCCEEEECEEEEEECCHHHHHHHE EVAVEEPSGLRPLPGYG EEEECCCCCCCCCCCCC >Mature Secondary Structure GTLLDDRKLLIISAMLGLAGFTGMIISSATLTPDPIKIAQIDRGMIDRKVTVEGTVADV CCCCCCCHHHHHHHHHHHHCHHHHHEECCCCCCCCEEEEECCCCCCCCEEEECCCHHHH RESEHSGIIFLKINDGTGTITAVIFESTAETIKRNGPAPILLKGMRVQVTGRVKEYRGLL CCCCCCCEEEEEEECCCCEEEEEEEHHHHHHHHCCCCCCEEEECEEEEEECCHHHHHHHE EVAVEEPSGLRPLPGYG EEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA