Definition Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome.
Accession NC_000916
Length 1,751,377

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Identifier: 15679519

GI number: 15679519

Start: 1383046

End: 1384125

Strand: Direct

Name: Not Available

Synonym: MTH1522

Alternate gene names: NA

Gene position: 1383046-1384125 (Clockwise)

Preceding gene: 15679517

Following gene: 15679520

Centisome position: 78.97

GC content: 52.13

Gene sequence:

>1080_bases
TTGCATCCAAGACCCAGCCCAATAGCCGCATCACTCTACACACTCAGAGACCTTGACGCTGACGTGATAATCCTTCACGG
CCCCCATGGCTGCTGCTTCAGGACAGGGAGACTCCTTGAAACTGATGGAGTCCGTGTCCTAACAACTGCAATGTCAGAGC
AGGACTTCATCTTCGGGGCATCCGATAAACTCACAGAGACCCTCAGGAAGGCATATGAAATGTTCTCCCCCAAACTTGTG
GGTGTGGTGGGCACCTGTGCCAGTATGATAATCGGCGAGGACCTGAAGGAGGCTGTCCAGAGGGCGGGTATACCTGCAAG
GGTCCTCGCCGTGGAATCCCATGGCGGCTTCGGTGAGGGTGATAACACTGAGGGTGCCATAATAGTCCTGGAGGCAGCTG
CGGAGCAGGGTATAATCCCTGAAGAGGAGGCAGAGCGTCAGATAAAGATGCTGAAACTCGCAACAGAAATTGAAAAGACA
AGGGGCATGGCCCAGGGGAAATACATCCGCCCATCCTACGGCGATGATAAGGATGAGGTGGCTCTCAGGGTTCTTGAAGC
CATAATGGAAGGTAGAAGGGTGGCCTTTGTCCTCAATGCCAAGAAGGAGACATCCTACCTCTTTGCCGATACACTGACAC
TGCCCTTCGGGTCACTGAACCCTGATAACCCCCCCATTATAATCGCGAATCTTGATAAGGGTATTGGCCTTCCAAGGATA
CGGAGGCATGCAGAGAACATACTCTCAGAGATAGAGAGGAGCGGTAACAGGGTGGAGCATATAACAGGTGGACTTGATGA
ATACCCCATAACCGGTGCAAGGGCTGCAGAAATTTTAAGGAATGAGGAAATAGAGTTTGCAGTCGTTTCAGGGGTTCCCC
ATGCACTCCCAGTGGAGGAACTGGGTCTTGAATCCGTTGCAGTTACCGACGGGCCCAGACTGGTGGAGCCACTCAGGGGA
CTGGGTTACACCCATGTGGTGGCTGAACTTGATGCCCATGCAAGGACACTGGGACAGAGGAGCATAGTGGAATCTGATTT
TGGAGATGCCCTTAGAAGAAACATTAAAAAGGTGATATGA

Upstream 100 bases:

>100_bases
TAAATGAATATTAATCAATCCATGGATATGAATCATGGGATGGATTTGCATCATGGTTCCAGCCATGTTGCATAACCACA
GACATTTGAGGTGACGTAAT

Downstream 100 bases:

>100_bases
TGGCTGAAACAGTTGGAATGATACTCTGCGGGGGATTCGGGAAACGTCTGAGACCCCTAACTGAGAAAATACCAAAACCA
CTCATCGAGATAAAGGAGGG

Product: nitrogenase alpha chain (NifD) related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MHPRPSPIAASLYTLRDLDADVIILHGPHGCCFRTGRLLETDGVRVLTTAMSEQDFIFGASDKLTETLRKAYEMFSPKLV
GVVGTCASMIIGEDLKEAVQRAGIPARVLAVESHGGFGEGDNTEGAIIVLEAAAEQGIIPEEEAERQIKMLKLATEIEKT
RGMAQGKYIRPSYGDDKDEVALRVLEAIMEGRRVAFVLNAKKETSYLFADTLTLPFGSLNPDNPPIIIANLDKGIGLPRI
RRHAENILSEIERSGNRVEHITGGLDEYPITGARAAEILRNEEIEFAVVSGVPHALPVEELGLESVAVTDGPRLVEPLRG
LGYTHVVAELDAHARTLGQRSIVESDFGDALRRNIKKVI

Sequences:

>Translated_359_residues
MHPRPSPIAASLYTLRDLDADVIILHGPHGCCFRTGRLLETDGVRVLTTAMSEQDFIFGASDKLTETLRKAYEMFSPKLV
GVVGTCASMIIGEDLKEAVQRAGIPARVLAVESHGGFGEGDNTEGAIIVLEAAAEQGIIPEEEAERQIKMLKLATEIEKT
RGMAQGKYIRPSYGDDKDEVALRVLEAIMEGRRVAFVLNAKKETSYLFADTLTLPFGSLNPDNPPIIIANLDKGIGLPRI
RRHAENILSEIERSGNRVEHITGGLDEYPITGARAAEILRNEEIEFAVVSGVPHALPVEELGLESVAVTDGPRLVEPLRG
LGYTHVVAELDAHARTLGQRSIVESDFGDALRRNIKKVI
>Mature_359_residues
MHPRPSPIAASLYTLRDLDADVIILHGPHGCCFRTGRLLETDGVRVLTTAMSEQDFIFGASDKLTETLRKAYEMFSPKLV
GVVGTCASMIIGEDLKEAVQRAGIPARVLAVESHGGFGEGDNTEGAIIVLEAAAEQGIIPEEEAERQIKMLKLATEIEKT
RGMAQGKYIRPSYGDDKDEVALRVLEAIMEGRRVAFVLNAKKETSYLFADTLTLPFGSLNPDNPPIIIANLDKGIGLPRI
RRHAENILSEIERSGNRVEHITGGLDEYPITGARAAEILRNEEIEFAVVSGVPHALPVEELGLESVAVTDGPRLVEPLRG
LGYTHVVAELDAHARTLGQRSIVESDFGDALRRNIKKVI

Specific function: Unknown

COG id: COG2710

COG function: function code C; Nitrogenase molybdenum-iron protein, alpha and beta chains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1423

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1522_METTH (O27566)

Other databases:

- EMBL:   AE000666
- PIR:   B69070
- RefSeq:   NP_276636.1
- ProteinModelPortal:   O27566
- STRING:   O27566
- GeneID:   1471791
- GenomeReviews:   AE000666_GR
- KEGG:   mth:MTH1522
- NMPDR:   fig|187420.1.peg.1491
- eggNOG:   arNOG04879
- HOGENOM:   HBG539370
- OMA:   AKKETAY
- ProtClustDB:   CLSK876569
- BioCyc:   MTHE187420:MTH1522-MONOMER
- InterPro:   IPR017675
- InterPro:   IPR000510
- TIGRFAMs:   TIGR03282

Pfam domain/function: PF00148 Oxidored_nitro

EC number: NA

Molecular weight: Translated: 39102; Mature: 39102

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPRPSPIAASLYTLRDLDADVIILHGPHGCCFRTGRLLETDGVRVLTTAMSEQDFIFGA
CCCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEECCCEEECCCCEEEEECCCCCCEEECC
SDKLTETLRKAYEMFSPKLVGVVGTCASMIIGEDLKEAVQRAGIPARVLAVESHGGFGEG
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC
DNTEGAIIVLEAAAEQGIIPEEEAERQIKMLKLATEIEKTRGMAQGKYIRPSYGDDKDEV
CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHH
ALRVLEAIMEGRRVAFVLNAKKETSYLFADTLTLPFGSLNPDNPPIIIANLDKGIGLPRI
HHHHHHHHHCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCHHH
RRHAENILSEIERSGNRVEHITGGLDEYPITGARAAEILRNEEIEFAVVSGVPHALPVEE
HHHHHHHHHHHHHCCCEEEHHCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCHHH
LGLESVAVTDGPRLVEPLRGLGYTHVVAELDAHARTLGQRSIVESDFGDALRRNIKKVI
HCCCEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHPRPSPIAASLYTLRDLDADVIILHGPHGCCFRTGRLLETDGVRVLTTAMSEQDFIFGA
CCCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEECCCEEECCCCEEEEECCCCCCEEECC
SDKLTETLRKAYEMFSPKLVGVVGTCASMIIGEDLKEAVQRAGIPARVLAVESHGGFGEG
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC
DNTEGAIIVLEAAAEQGIIPEEEAERQIKMLKLATEIEKTRGMAQGKYIRPSYGDDKDEV
CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHH
ALRVLEAIMEGRRVAFVLNAKKETSYLFADTLTLPFGSLNPDNPPIIIANLDKGIGLPRI
HHHHHHHHHCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCHHH
RRHAENILSEIERSGNRVEHITGGLDEYPITGARAAEILRNEEIEFAVVSGVPHALPVEE
HHHHHHHHHHHHHCCCEEEHHCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCHHH
LGLESVAVTDGPRLVEPLRGLGYTHVVAELDAHARTLGQRSIVESDFGDALRRNIKKVI
HCCCEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463