| Definition | Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome. |
|---|---|
| Accession | NC_000916 |
| Length | 1,751,377 |
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Identifier: 15679519
GI number: 15679519
Start: 1383046
End: 1384125
Strand: Direct
Name: Not Available
Synonym: MTH1522
Alternate gene names: NA
Gene position: 1383046-1384125 (Clockwise)
Preceding gene: 15679517
Following gene: 15679520
Centisome position: 78.97
GC content: 52.13
Gene sequence:
>1080_bases TTGCATCCAAGACCCAGCCCAATAGCCGCATCACTCTACACACTCAGAGACCTTGACGCTGACGTGATAATCCTTCACGG CCCCCATGGCTGCTGCTTCAGGACAGGGAGACTCCTTGAAACTGATGGAGTCCGTGTCCTAACAACTGCAATGTCAGAGC AGGACTTCATCTTCGGGGCATCCGATAAACTCACAGAGACCCTCAGGAAGGCATATGAAATGTTCTCCCCCAAACTTGTG GGTGTGGTGGGCACCTGTGCCAGTATGATAATCGGCGAGGACCTGAAGGAGGCTGTCCAGAGGGCGGGTATACCTGCAAG GGTCCTCGCCGTGGAATCCCATGGCGGCTTCGGTGAGGGTGATAACACTGAGGGTGCCATAATAGTCCTGGAGGCAGCTG CGGAGCAGGGTATAATCCCTGAAGAGGAGGCAGAGCGTCAGATAAAGATGCTGAAACTCGCAACAGAAATTGAAAAGACA AGGGGCATGGCCCAGGGGAAATACATCCGCCCATCCTACGGCGATGATAAGGATGAGGTGGCTCTCAGGGTTCTTGAAGC CATAATGGAAGGTAGAAGGGTGGCCTTTGTCCTCAATGCCAAGAAGGAGACATCCTACCTCTTTGCCGATACACTGACAC TGCCCTTCGGGTCACTGAACCCTGATAACCCCCCCATTATAATCGCGAATCTTGATAAGGGTATTGGCCTTCCAAGGATA CGGAGGCATGCAGAGAACATACTCTCAGAGATAGAGAGGAGCGGTAACAGGGTGGAGCATATAACAGGTGGACTTGATGA ATACCCCATAACCGGTGCAAGGGCTGCAGAAATTTTAAGGAATGAGGAAATAGAGTTTGCAGTCGTTTCAGGGGTTCCCC ATGCACTCCCAGTGGAGGAACTGGGTCTTGAATCCGTTGCAGTTACCGACGGGCCCAGACTGGTGGAGCCACTCAGGGGA CTGGGTTACACCCATGTGGTGGCTGAACTTGATGCCCATGCAAGGACACTGGGACAGAGGAGCATAGTGGAATCTGATTT TGGAGATGCCCTTAGAAGAAACATTAAAAAGGTGATATGA
Upstream 100 bases:
>100_bases TAAATGAATATTAATCAATCCATGGATATGAATCATGGGATGGATTTGCATCATGGTTCCAGCCATGTTGCATAACCACA GACATTTGAGGTGACGTAAT
Downstream 100 bases:
>100_bases TGGCTGAAACAGTTGGAATGATACTCTGCGGGGGATTCGGGAAACGTCTGAGACCCCTAACTGAGAAAATACCAAAACCA CTCATCGAGATAAAGGAGGG
Product: nitrogenase alpha chain (NifD) related protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MHPRPSPIAASLYTLRDLDADVIILHGPHGCCFRTGRLLETDGVRVLTTAMSEQDFIFGASDKLTETLRKAYEMFSPKLV GVVGTCASMIIGEDLKEAVQRAGIPARVLAVESHGGFGEGDNTEGAIIVLEAAAEQGIIPEEEAERQIKMLKLATEIEKT RGMAQGKYIRPSYGDDKDEVALRVLEAIMEGRRVAFVLNAKKETSYLFADTLTLPFGSLNPDNPPIIIANLDKGIGLPRI RRHAENILSEIERSGNRVEHITGGLDEYPITGARAAEILRNEEIEFAVVSGVPHALPVEELGLESVAVTDGPRLVEPLRG LGYTHVVAELDAHARTLGQRSIVESDFGDALRRNIKKVI
Sequences:
>Translated_359_residues MHPRPSPIAASLYTLRDLDADVIILHGPHGCCFRTGRLLETDGVRVLTTAMSEQDFIFGASDKLTETLRKAYEMFSPKLV GVVGTCASMIIGEDLKEAVQRAGIPARVLAVESHGGFGEGDNTEGAIIVLEAAAEQGIIPEEEAERQIKMLKLATEIEKT RGMAQGKYIRPSYGDDKDEVALRVLEAIMEGRRVAFVLNAKKETSYLFADTLTLPFGSLNPDNPPIIIANLDKGIGLPRI RRHAENILSEIERSGNRVEHITGGLDEYPITGARAAEILRNEEIEFAVVSGVPHALPVEELGLESVAVTDGPRLVEPLRG LGYTHVVAELDAHARTLGQRSIVESDFGDALRRNIKKVI >Mature_359_residues MHPRPSPIAASLYTLRDLDADVIILHGPHGCCFRTGRLLETDGVRVLTTAMSEQDFIFGASDKLTETLRKAYEMFSPKLV GVVGTCASMIIGEDLKEAVQRAGIPARVLAVESHGGFGEGDNTEGAIIVLEAAAEQGIIPEEEAERQIKMLKLATEIEKT RGMAQGKYIRPSYGDDKDEVALRVLEAIMEGRRVAFVLNAKKETSYLFADTLTLPFGSLNPDNPPIIIANLDKGIGLPRI RRHAENILSEIERSGNRVEHITGGLDEYPITGARAAEILRNEEIEFAVVSGVPHALPVEELGLESVAVTDGPRLVEPLRG LGYTHVVAELDAHARTLGQRSIVESDFGDALRRNIKKVI
Specific function: Unknown
COG id: COG2710
COG function: function code C; Nitrogenase molybdenum-iron protein, alpha and beta chains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1423
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1522_METTH (O27566)
Other databases:
- EMBL: AE000666 - PIR: B69070 - RefSeq: NP_276636.1 - ProteinModelPortal: O27566 - STRING: O27566 - GeneID: 1471791 - GenomeReviews: AE000666_GR - KEGG: mth:MTH1522 - NMPDR: fig|187420.1.peg.1491 - eggNOG: arNOG04879 - HOGENOM: HBG539370 - OMA: AKKETAY - ProtClustDB: CLSK876569 - BioCyc: MTHE187420:MTH1522-MONOMER - InterPro: IPR017675 - InterPro: IPR000510 - TIGRFAMs: TIGR03282
Pfam domain/function: PF00148 Oxidored_nitro
EC number: NA
Molecular weight: Translated: 39102; Mature: 39102
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPRPSPIAASLYTLRDLDADVIILHGPHGCCFRTGRLLETDGVRVLTTAMSEQDFIFGA CCCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEECCCEEECCCCEEEEECCCCCCEEECC SDKLTETLRKAYEMFSPKLVGVVGTCASMIIGEDLKEAVQRAGIPARVLAVESHGGFGEG CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC DNTEGAIIVLEAAAEQGIIPEEEAERQIKMLKLATEIEKTRGMAQGKYIRPSYGDDKDEV CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHH ALRVLEAIMEGRRVAFVLNAKKETSYLFADTLTLPFGSLNPDNPPIIIANLDKGIGLPRI HHHHHHHHHCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCHHH RRHAENILSEIERSGNRVEHITGGLDEYPITGARAAEILRNEEIEFAVVSGVPHALPVEE HHHHHHHHHHHHHCCCEEEHHCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCHHH LGLESVAVTDGPRLVEPLRGLGYTHVVAELDAHARTLGQRSIVESDFGDALRRNIKKVI HCCCEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHPRPSPIAASLYTLRDLDADVIILHGPHGCCFRTGRLLETDGVRVLTTAMSEQDFIFGA CCCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEECCCEEECCCCEEEEECCCCCCEEECC SDKLTETLRKAYEMFSPKLVGVVGTCASMIIGEDLKEAVQRAGIPARVLAVESHGGFGEG CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC DNTEGAIIVLEAAAEQGIIPEEEAERQIKMLKLATEIEKTRGMAQGKYIRPSYGDDKDEV CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHH ALRVLEAIMEGRRVAFVLNAKKETSYLFADTLTLPFGSLNPDNPPIIIANLDKGIGLPRI HHHHHHHHHCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCHHH RRHAENILSEIERSGNRVEHITGGLDEYPITGARAAEILRNEEIEFAVVSGVPHALPVEE HHHHHHHHHHHHHCCCEEEHHCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCHHH LGLESVAVTDGPRLVEPLRGLGYTHVVAELDAHARTLGQRSIVESDFGDALRRNIKKVI HCCCEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463