| Definition | Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome. |
|---|---|
| Accession | NC_000916 |
| Length | 1,751,377 |
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Identifier: 15679405
GI number: 15679405
Start: 1273908
End: 1274483
Strand: Direct
Name: Not Available
Synonym: MTH1406
Alternate gene names: 15679405
Gene position: 1273908-1274483 (Clockwise)
Preceding gene: 15679404
Following gene: 15679409
Centisome position: 72.74
GC content: 52.6
Gene sequence:
>576_bases GTGATACACTTGAACCCGGTAAGAGAAGTCGTTGATGTTTCACTTCATATTTACAGGACCGGCCTTGTATCCGGCATAGG TGGAAATGTGAGTGCAAGAATGGGTGATAGGGTCTTCATAACCCCGACCATGGTCCCCCTGGGGGAGGTTTCACTCAGGA ATGTCGTTTTGGTGGACCTCAATGGAAGGGTCATCAGGGGAGGGAGGCCATCATCCGAACTGGGACTCCACCTTGAGGTA TACAGGGCACGGCCAGATGTGGGTGGAATAGTGCACACCCATTCGCCCCATGCGAGGGCCTTCTCCATTGCAGGAGTCCA GATTGAGAAGATGGAGGGATTCATGGGTCTCGGGAGGGGTTACATACCCATGGTCCCGTACCACCCGCCAGGTAGCAGAG AACTTGCAGCTGAATGTGGCAGGGTAATGGTTGATGAGGATGCTGCCATCCTGGAGAACCATGGAGTTGTATGTGCAGGT GAAGGTTTAAGGGACGCCCTTCTACTGGCGGAATTCATTGAGGAGTCTGCAAGGACCCAGTTCATAGCCGAGACCCTGAA ATCCATGAAAAAATAA
Upstream 100 bases:
>100_bases CCAGGTCCCGGTGCTTAACAGGGGTGTGATGAAACTCCTTGAATTCAGCTGAATGTTATATACACCTGAACCCTGCAACT GTATGTTGATGTAATCCAAG
Downstream 100 bases:
>100_bases TCAGCACTTAAGTGCACAGGCAGAACCCTCAAAAAATCCAGGAAAAAGATATCATCACTTAAAAATAGTAAAACTATCTT AACCTCTGGAAAACCCTGAA
Product: fuculose-1-phosphate aldolase
Products: NA
Alternate protein names: L-fuculose-1-phosphate aldolase [H]
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MIHLNPVREVVDVSLHIYRTGLVSGIGGNVSARMGDRVFITPTMVPLGEVSLRNVVLVDLNGRVIRGGRPSSELGLHLEV YRARPDVGGIVHTHSPHARAFSIAGVQIEKMEGFMGLGRGYIPMVPYHPPGSRELAAECGRVMVDEDAAILENHGVVCAG EGLRDALLLAEFIEESARTQFIAETLKSMKK
Sequences:
>Translated_191_residues MIHLNPVREVVDVSLHIYRTGLVSGIGGNVSARMGDRVFITPTMVPLGEVSLRNVVLVDLNGRVIRGGRPSSELGLHLEV YRARPDVGGIVHTHSPHARAFSIAGVQIEKMEGFMGLGRGYIPMVPYHPPGSRELAAECGRVMVDEDAAILENHGVVCAG EGLRDALLLAEFIEESARTQFIAETLKSMKK >Mature_191_residues MIHLNPVREVVDVSLHIYRTGLVSGIGGNVSARMGDRVFITPTMVPLGEVSLRNVVLVDLNGRVIRGGRPSSELGLHLEV YRARPDVGGIVHTHSPHARAFSIAGVQIEKMEGFMGLGRGYIPMVPYHPPGSRELAAECGRVMVDEDAAILENHGVVCAG EGLRDALLLAEFIEESARTQFIAETLKSMKK
Specific function: Catalyzes the reversible aldol cleavage of L-fuculose-1- phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. The substrate preference order is glyceraldehyde > DL- lactaldehyde, glycolaldehyde > acrolein > formaldehyde, methylglyoxal > acet
COG id: COG0235
COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789164, Length=168, Percent_Identity=35.1190476190476, Blast_Score=114, Evalue=5e-27, Organism=Escherichia coli, GI1789094, Length=180, Percent_Identity=31.1111111111111, Blast_Score=96, Evalue=1e-21, Organism=Escherichia coli, GI1790642, Length=197, Percent_Identity=32.48730964467, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1786247, Length=190, Percent_Identity=32.6315789473684, Blast_Score=64, Evalue=9e-12, Organism=Escherichia coli, GI1790008, Length=180, Percent_Identity=29.4444444444444, Blast_Score=61, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001303 [H]
Pfam domain/function: PF00596 Aldolase_II [H]
EC number: =4.1.2.17 [H]
Molecular weight: Translated: 20702; Mature: 20702
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHLNPVREVVDVSLHIYRTGLVSGIGGNVSARMGDRVFITPTMVPLGEVSLRNVVLVDL CCCCCHHHHHHHHHHHEEEHHHHHCCCCCEEEECCCEEEEEECCCCCCCCCCCEEEEEEC NGRVIRGGRPSSELGLHLEVYRARPDVGGIVHTHSPHARAFSIAGVQIEKMEGFMGLGRG CCEEEECCCCCHHCCEEEEEEECCCCCCCEEECCCCCCCEEEECCEEEEECCCHHHCCCC YIPMVPYHPPGSRELAAECGRVMVDEDAAILENHGVVCAGEGLRDALLLAEFIEESARTQ CCCCCCCCCCCCHHHHHHCCCEEECCCCHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHH FIAETLKSMKK HHHHHHHHHCC >Mature Secondary Structure MIHLNPVREVVDVSLHIYRTGLVSGIGGNVSARMGDRVFITPTMVPLGEVSLRNVVLVDL CCCCCHHHHHHHHHHHEEEHHHHHCCCCCEEEECCCEEEEEECCCCCCCCCCCEEEEEEC NGRVIRGGRPSSELGLHLEVYRARPDVGGIVHTHSPHARAFSIAGVQIEKMEGFMGLGRG CCEEEECCCCCHHCCEEEEEEECCCCCCCEEECCCCCCCEEEECCEEEEECCCHHHCCCC YIPMVPYHPPGSRELAAECGRVMVDEDAAILENHGVVCAGEGLRDALLLAEFIEESARTQ CCCCCCCCCCCCHHHHHHCCCEEECCCCHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHH FIAETLKSMKK HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]