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Identifier: 15679204

GI number: 15679204

Start: 1096626

End: 1097111

Strand: Direct

Name: Not Available

Synonym: MTH1193

Alternate gene names: 15679204

Gene position: 1096626-1097111 (Clockwise)

Preceding gene: 15679203

Following gene: 15679205

Centisome position: 62.62

GC content: 47.53

Gene sequence:

>486_bases
GTGGTGATTTGTATGGATGATGATCTGGTCAAAATCGATGATATTGACAGAAAGATAATAGACCTCCTGAATGAGGACGG
ACGCATGTCCTACAGGAACATATCAAGGATACTCGACGTTTCAGTGGGTACCGTCCACAACCGTGTTGAAAAACTTGTTA
AAAAGGGGGTTATAAAGAAATTTGTGCCCATAATCGACCACTCCAAGCTCGGATACAAGCTGACAGCCATCATAGGTGTG
AAGGTCAAGGGAGGGGTCCTGAGGAACTGGGAGACAAGGACCGCCTACCATAAGAACGTCCTGGCAGTGTATGACGTTAC
AGGAGAATTCGACGCCATACTCATAGGTAAGTTCCGGGACACCGGTGAACTTGACAGCTTCATAAAGGGCCTCCTCAGTG
AGGGGGATGTGCAGAGGACATACACACAGACCGTCCTAAACATCGTCAAGGAGGATATGACCTCCACCAAGATGATCGGA
GATTAA

Upstream 100 bases:

>100_bases
AAGGGAACATCCCCTATCTTATAAAAGTTGATGACTTCTTCTAAACTTATATTCACTTAAAAAACTTTATAATATAACTT
TCATAGGCATACATTGTTTA

Downstream 100 bases:

>100_bases
ATTATTTATCCCCTGAATCAGAAAATGATAACCATATGGTTATCATCCACTCCCCATCCTATGACCTGCACAATCATGAG
GGTCACGTTGAAAATAGTGG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MVICMDDDLVKIDDIDRKIIDLLNEDGRMSYRNISRILDVSVGTVHNRVEKLVKKGVIKKFVPIIDHSKLGYKLTAIIGV
KVKGGVLRNWETRTAYHKNVLAVYDVTGEFDAILIGKFRDTGELDSFIKGLLSEGDVQRTYTQTVLNIVKEDMTSTKMIG
D

Sequences:

>Translated_161_residues
MVICMDDDLVKIDDIDRKIIDLLNEDGRMSYRNISRILDVSVGTVHNRVEKLVKKGVIKKFVPIIDHSKLGYKLTAIIGV
KVKGGVLRNWETRTAYHKNVLAVYDVTGEFDAILIGKFRDTGELDSFIKGLLSEGDVQRTYTQTVLNIVKEDMTSTKMIG
D
>Mature_161_residues
MVICMDDDLVKIDDIDRKIIDLLNEDGRMSYRNISRILDVSVGTVHNRVEKLVKKGVIKKFVPIIDHSKLGYKLTAIIGV
KVKGGVLRNWETRTAYHKNVLAVYDVTGEFDAILIGKFRDTGELDSFIKGLLSEGDVQRTYTQTVLNIVKEDMTSTKMIG
D

Specific function: Unknown

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR013196
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 18174; Mature: 18174

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVICMDDDLVKIDDIDRKIIDLLNEDGRMSYRNISRILDVSVGTVHNRVEKLVKKGVIKK
CEEECCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVPIIDHSKLGYKLTAIIGVKVKGGVLRNWETRTAYHKNVLAVYDVTGEFDAILIGKFRD
HHHHHCCCCCCEEEEEEEEEEECCCEECCCCHHHHHHCCEEEEEECCCCCCEEEEECCCC
TGELDSFIKGLLSEGDVQRTYTQTVLNIVKEDMTSTKMIGD
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVICMDDDLVKIDDIDRKIIDLLNEDGRMSYRNISRILDVSVGTVHNRVEKLVKKGVIKK
CEEECCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVPIIDHSKLGYKLTAIIGVKVKGGVLRNWETRTAYHKNVLAVYDVTGEFDAILIGKFRD
HHHHHCCCCCCEEEEEEEEEEECCCEECCCCHHHHHHCCEEEEEECCCCCCEEEEECCCC
TGELDSFIKGLLSEGDVQRTYTQTVLNIVKEDMTSTKMIGD
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA