| Definition | Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome. |
|---|---|
| Accession | NC_000916 |
| Length | 1,751,377 |
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Identifier: 15679182
GI number: 15679182
Start: 1077512
End: 1078828
Strand: Direct
Name: Not Available
Synonym: MTH1171
Alternate gene names: 15679182
Gene position: 1077512-1078828 (Clockwise)
Preceding gene: 15679181
Following gene: 15679193
Centisome position: 61.52
GC content: 50.87
Gene sequence:
>1317_bases ATGAGTCGTGTAACTGTTGTAACACCTGAACACTACAATTACGGTTCAATGCTCATTGCAGGAGCCCTTAGGGACCTTGG ACACAGGGTTGAAATCAGAAAGGGATTTGATGGTGTTAAATCAGAGATCGTATTCATAAGCCTTCAGTCCACCATCCACC TCCTGAGATACAGGGATATTATTAATAAAATGGGCGGCTTCAGGGTGGTGGGGGGTCCGGTCAGCATAGACCCTGAGATG GTATTCAGGTACCTCGATGTGGACCTCGTGGTGATGGGTGAGGGTGAGGACAAGGTCGGTCCTGTGATGGAGCTTGCAGC TGGAAATTGTAAACCAGAGGATGTCCCCGGTGCAGCCTTCAGATCACCGGAGGGAATTGTGGTCAGTGAATCATCACCCT GCCCCATGGAGAGGCCCCTACCCCTTGTTCCAGGTGATATCTCCAGGGAGGATATACGGGGTGCCAGTGTCTACATTGAA ACCCACAGGGGATGTCCCGGTAACTGCACCTTCTGTCAGGTCCCTGAATTCTTTGGCAGAAATGTGAGGAGCAGGCCCCT AAAGGACATAATCATGGAGGTCCGGGAACTGAAGTCATCGGGTGCCAGGAGGTTCGCCATAAGTGGAGGTACAGGCACCC TCTATGGCAGCAGCAAATTCAGGGGTATTGATGAGGAAGCCTTCAGGGATCTTCTGAGGTGCATAAGTGAGGTCACCGGC AGTAGAAACCTCACCGTGCCGGATATAAGGGTCGATATGGTCAGCCCAGAGATTCTTGATGCCATATCAGAGTACACGAA TGGATGGGTCTTCTATGGTATAGAATCCGGGAGCAGGAGAATGCTCAGGAAGATGAAGAAGGGCATAACCCCTGATCAGG TTGTTGAGGCCGTTGAACTTGCAAGGGAGTACAACTTAAAAGTTGCAGGCTCCTTCATCGTCGGTTACCCTGGTGAGGAC GATGATGACTACCAGGAGACCCTTGAACTTGCAGATGAACTCATGCTGGATGACTACTTCGTGAGCATAGCCGAGCCACT GCCCGGTACTGAACTCGGTGAGGAGGTCATGGAACTCCCTGAGGATGAAAACCCGGTATTCATGAAGTCCAGTAACAGGC GATTTGATAGTCTGGCAGAGGAGAGGGCCTTCAATTTACTCCTGGAATCCTATGTATTCCGAAGTGTGCCGGTCCCCATG ACGTCCAGGCTTTTAAAGTCAATAACTGAGGAGGTTCGTCAGCAGCAGGAGCATATAAGAACCGTTACCGGATGCTCAAG GGAAAGCTGTGATGGATTCGGAGGTTTATCACTCTGA
Upstream 100 bases:
>100_bases GGGAGATGAGTGGCACCCTCTCAGAGTATGACGTGATCGAGAGGGAGATGGAAGCCTTCTATGAACTCATACAGGCAATA AATTTCTTTGGTGCTTCTGA
Downstream 100 bases:
>100_bases AAATTTCATGGATGCATTTTTAATGACCTCCTCAAGGGATGATCCCTCTGGAGGTACTTTTCCAAGAAGATAATCCGAAA AAAGAAGTTCTGGACCCTCT
Product: phosphonoacetaldehyde methylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MSRVTVVTPEHYNYGSMLIAGALRDLGHRVEIRKGFDGVKSEIVFISLQSTIHLLRYRDIINKMGGFRVVGGPVSIDPEM VFRYLDVDLVVMGEGEDKVGPVMELAAGNCKPEDVPGAAFRSPEGIVVSESSPCPMERPLPLVPGDISREDIRGASVYIE THRGCPGNCTFCQVPEFFGRNVRSRPLKDIIMEVRELKSSGARRFAISGGTGTLYGSSKFRGIDEEAFRDLLRCISEVTG SRNLTVPDIRVDMVSPEILDAISEYTNGWVFYGIESGSRRMLRKMKKGITPDQVVEAVELAREYNLKVAGSFIVGYPGED DDDYQETLELADELMLDDYFVSIAEPLPGTELGEEVMELPEDENPVFMKSSNRRFDSLAEERAFNLLLESYVFRSVPVPM TSRLLKSITEEVRQQQEHIRTVTGCSRESCDGFGGLSL
Sequences:
>Translated_438_residues MSRVTVVTPEHYNYGSMLIAGALRDLGHRVEIRKGFDGVKSEIVFISLQSTIHLLRYRDIINKMGGFRVVGGPVSIDPEM VFRYLDVDLVVMGEGEDKVGPVMELAAGNCKPEDVPGAAFRSPEGIVVSESSPCPMERPLPLVPGDISREDIRGASVYIE THRGCPGNCTFCQVPEFFGRNVRSRPLKDIIMEVRELKSSGARRFAISGGTGTLYGSSKFRGIDEEAFRDLLRCISEVTG SRNLTVPDIRVDMVSPEILDAISEYTNGWVFYGIESGSRRMLRKMKKGITPDQVVEAVELAREYNLKVAGSFIVGYPGED DDDYQETLELADELMLDDYFVSIAEPLPGTELGEEVMELPEDENPVFMKSSNRRFDSLAEERAFNLLLESYVFRSVPVPM TSRLLKSITEEVRQQQEHIRTVTGCSRESCDGFGGLSL >Mature_437_residues SRVTVVTPEHYNYGSMLIAGALRDLGHRVEIRKGFDGVKSEIVFISLQSTIHLLRYRDIINKMGGFRVVGGPVSIDPEMV FRYLDVDLVVMGEGEDKVGPVMELAAGNCKPEDVPGAAFRSPEGIVVSESSPCPMERPLPLVPGDISREDIRGASVYIET HRGCPGNCTFCQVPEFFGRNVRSRPLKDIIMEVRELKSSGARRFAISGGTGTLYGSSKFRGIDEEAFRDLLRCISEVTGS RNLTVPDIRVDMVSPEILDAISEYTNGWVFYGIESGSRRMLRKMKKGITPDQVVEAVELAREYNLKVAGSFIVGYPGEDD DDYQETLELADELMLDDYFVSIAEPLPGTELGEEVMELPEDENPVFMKSSNRRFDSLAEERAFNLLLESYVFRSVPVPMT SRLLKSITEEVRQQQEHIRTVTGCSRESCDGFGGLSL
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methylthiotransferase family [H]
Homologues:
Organism=Escherichia coli, GI1786882, Length=221, Percent_Identity=28.0542986425339, Blast_Score=87, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006158 - InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR020612 - InterPro: IPR007197 [H]
Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 48753; Mature: 48622
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS01278 UPF0004
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRVTVVTPEHYNYGSMLIAGALRDLGHRVEIRKGFDGVKSEIVFISLQSTIHLLRYRDI CCCEEEECCCCCCCCHHHHHHHHHHHCCEEEHHHCCCCCCCCEEEEEHHHHHHHHHHHHH INKMGGFRVVGGPVSIDPEMVFRYLDVDLVVMGEGEDKVGPVMELAAGNCKPEDVPGAAF HHHCCCEEEECCCCCCCHHHHHHHHCEEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCC RSPEGIVVSESSPCPMERPLPLVPGDISREDIRGASVYIETHRGCPGNCTFCQVPEFFGR CCCCCEEEECCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEECCCCCCCCCEEECCHHHCC NVRSRPLKDIIMEVRELKSSGARRFAISGGTGTLYGSSKFRGIDEEAFRDLLRCISEVTG CCCCCCHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHCC SRNLTVPDIRVDMVSPEILDAISEYTNGWVFYGIESGSRRMLRKMKKGITPDQVVEAVEL CCCCCCCCEEEEECCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHH AREYNLKVAGSFIVGYPGEDDDDYQETLELADELMLDDYFVSIAEPLPGTELGEEVMELP HHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC EDENPVFMKSSNRRFDSLAEERAFNLLLESYVFRSVPVPMTSRLLKSITEEVRQQQEHIR CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH TVTGCSRESCDGFGGLSL HHHCCCCCCCCCCCCCCC >Mature Secondary Structure SRVTVVTPEHYNYGSMLIAGALRDLGHRVEIRKGFDGVKSEIVFISLQSTIHLLRYRDI CCEEEECCCCCCCCHHHHHHHHHHHCCEEEHHHCCCCCCCCEEEEEHHHHHHHHHHHHH INKMGGFRVVGGPVSIDPEMVFRYLDVDLVVMGEGEDKVGPVMELAAGNCKPEDVPGAAF HHHCCCEEEECCCCCCCHHHHHHHHCEEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCC RSPEGIVVSESSPCPMERPLPLVPGDISREDIRGASVYIETHRGCPGNCTFCQVPEFFGR CCCCCEEEECCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEECCCCCCCCCEEECCHHHCC NVRSRPLKDIIMEVRELKSSGARRFAISGGTGTLYGSSKFRGIDEEAFRDLLRCISEVTG CCCCCCHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHCC SRNLTVPDIRVDMVSPEILDAISEYTNGWVFYGIESGSRRMLRKMKKGITPDQVVEAVEL CCCCCCCCEEEEECCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHH AREYNLKVAGSFIVGYPGEDDDDYQETLELADELMLDDYFVSIAEPLPGTELGEEVMELP HHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC EDENPVFMKSSNRRFDSLAEERAFNLLLESYVFRSVPVPMTSRLLKSITEEVRQQQEHIR CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH TVTGCSRESCDGFGGLSL HHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]