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Identifier: 15679044

GI number: 15679044

Start: 938253

End: 938924

Strand: Direct

Name: Not Available

Synonym: MTH1026

Alternate gene names: 15679044

Gene position: 938253-938924 (Clockwise)

Preceding gene: 15679029

Following gene: 15679045

Centisome position: 53.57

GC content: 49.85

Gene sequence:

>672_bases
GTGTTGCCAAAGAGGGCCAGCTTCCTCGTGAGTGTGGCCACAATTCCTCTGCTATTTGGTTACCATGCCATAGGCATACT
CATGTTCACGGTTATAGCCTTCATGATGCAGTTCTTCCGGGACCCTGACAGGATCCCCCCCTCTGATGAGGACCTCATCA
TTGCCCCTGCAGATGGAAGGCGCCTTTCAGGTAAGATAGACAGGATAGAACGGGTGGGATCAGACTACCCCCTCATTGAC
AGGATATTCCCTGATGGGAGTGGTGGTATCCTCATAAGTACCTTCATGTCACCCTTCGATGTCCATGTTAACAGGGCCCC
TGTCTCCGGGAAGGTGATATACACCGAGCATGTTGATGGGAGATTCCAGGTGGCCCGTTCAAGGGTACTCACTGAAAACG
AAAAAAACTTAATTGTAATAAAAACAGATTATGGGAACGTTGGTGTTATCCAGATAGCGGGCTTCGTTGCAAGGAGAATC
GTTCAGTACGTTAAAGAAGGCGAATATGTGGAGAGGGGCGACCGTATAGGTATGATAAGATTCGGCTCCAGGGTTGACCT
GGTACTGCCTGAGAACTGTGAGGTGCTTGTGAAAACCGGTTCAAGACCCATGGCCGGGGAGACAGTGGTGGCAAGGTTCA
ATCCAGGCAAAAAAAGGGTTAATGTGCAGTGA

Upstream 100 bases:

>100_bases
CCATGTGAAATGTTCATGTCACCGTGAACTCCATGTGAGAAGAAACCTATCAGATCATATTACCGGTAATGGGAACAGGT
GAGTTATTTGTTTGTAAAGG

Downstream 100 bases:

>100_bases
ATGATGACTACACCAGATTATAAGTAAAACAGGTGGCGGTTGATGAACGATAAAAAAATAACCTCATTTATAGCTCTTCC
AGATCTTTTATCAATGTTAA

Product: phosphatidylserine decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MLPKRASFLVSVATIPLLFGYHAIGILMFTVIAFMMQFFRDPDRIPPSDEDLIIAPADGRRLSGKIDRIERVGSDYPLID
RIFPDGSGGILISTFMSPFDVHVNRAPVSGKVIYTEHVDGRFQVARSRVLTENEKNLIVIKTDYGNVGVIQIAGFVARRI
VQYVKEGEYVERGDRIGMIRFGSRVDLVLPENCEVLVKTGSRPMAGETVVARFNPGKKRVNVQ

Sequences:

>Translated_223_residues
MLPKRASFLVSVATIPLLFGYHAIGILMFTVIAFMMQFFRDPDRIPPSDEDLIIAPADGRRLSGKIDRIERVGSDYPLID
RIFPDGSGGILISTFMSPFDVHVNRAPVSGKVIYTEHVDGRFQVARSRVLTENEKNLIVIKTDYGNVGVIQIAGFVARRI
VQYVKEGEYVERGDRIGMIRFGSRVDLVLPENCEVLVKTGSRPMAGETVVARFNPGKKRVNVQ
>Mature_223_residues
MLPKRASFLVSVATIPLLFGYHAIGILMFTVIAFMMQFFRDPDRIPPSDEDLIIAPADGRRLSGKIDRIERVGSDYPLID
RIFPDGSGGILISTFMSPFDVHVNRAPVSGKVIYTEHVDGRFQVARSRVLTENEKNLIVIKTDYGNVGVIQIAGFVARRI
VQYVKEGEYVERGDRIGMIRFGSRVDLVLPENCEVLVKTGSRPMAGETVVARFNPGKKRVNVQ

Specific function: Unknown

COG id: COG0688

COG function: function code I; Phosphatidylserine decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphatidylserine decarboxylase family. Type 3 subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSD_METTH (O27105)

Other databases:

- EMBL:   AE000666
- PIR:   H69003
- RefSeq:   NP_276161.1
- STRING:   O27105
- GeneID:   1471434
- GenomeReviews:   AE000666_GR
- KEGG:   mth:MTH1026
- NMPDR:   fig|187420.1.peg.1016
- eggNOG:   arNOG08868
- HOGENOM:   HBG541103
- OMA:   IFMSVFN
- ProtClustDB:   PRK05305
- BioCyc:   MetaCyc:MONOMER-15157
- BioCyc:   MTHE187420:MTH1026-MONOMER
- BRENDA:   4.1.1.65
- HAMAP:   MF_00664
- InterPro:   IPR003817
- InterPro:   IPR004428
- TIGRFAMs:   TIGR00164

Pfam domain/function: PF02666 PS_Dcarbxylase

EC number: =4.1.1.65

Molecular weight: Translated: 24896; Mature: 24896

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPKRASFLVSVATIPLLFGYHAIGILMFTVIAFMMQFFRDPDRIPPSDEDLIIAPADGR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCC
RLSGKIDRIERVGSDYPLIDRIFPDGSGGILISTFMSPFDVHVNRAPVSGKVIYTEHVDG
CCCCHHHHHHHCCCCCCCHHHCCCCCCCCEEEEECCCCCEEEEECCCCCCEEEEEECCCC
RFQVARSRVLTENEKNLIVIKTDYGNVGVIQIAGFVARRIVQYVKEGEYVERGDRIGMIR
HHHHHHHHHHCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEE
FGSRVDLVLPENCEVLVKTGSRPMAGETVVARFNPGKKRVNVQ
ECCEEEEEECCCCEEEEECCCCCCCCCEEEEEECCCCEEECCC
>Mature Secondary Structure
MLPKRASFLVSVATIPLLFGYHAIGILMFTVIAFMMQFFRDPDRIPPSDEDLIIAPADGR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCC
RLSGKIDRIERVGSDYPLIDRIFPDGSGGILISTFMSPFDVHVNRAPVSGKVIYTEHVDG
CCCCHHHHHHHCCCCCCCHHHCCCCCCCCEEEEECCCCCEEEEECCCCCCEEEEEECCCC
RFQVARSRVLTENEKNLIVIKTDYGNVGVIQIAGFVARRIVQYVKEGEYVERGDRIGMIR
HHHHHHHHHHCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEE
FGSRVDLVLPENCEVLVKTGSRPMAGETVVARFNPGKKRVNVQ
ECCEEEEEECCCCEEEEECCCCCCCCCEEEEEECCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463