Definition Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome.
Accession NC_000916
Length 1,751,377

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 15678877

GI number: 15678877

Start: 780311

End: 780889

Strand: Direct

Name: Not Available

Synonym: MTH857

Alternate gene names: NA

Gene position: 780311-780889 (Clockwise)

Preceding gene: 15678876

Following gene: 15678878

Centisome position: 44.55

GC content: 52.33

Gene sequence:

>579_bases
ATGAAGTACGCGCCATTATCCCGGGATGAAGGTAGAACTCTTGTTAAAATCGCGAGGATGGCCATAGAGGAGCACCTGCG
TGGATCAAAAAACCTCAGACTCCCTGATGATCTCCCTGATGTTTTCAGGCAAAGAAGAGGAGTTTTCGTTACACTTGAGA
AGAAAGGGAATCTGAGGGGATGTATAGGTTATCCAGAACCGGTGAAACCCCTGATAGATGCCCTTATTGAGGCCGCCATA
TCTGCTGCGACAGGTGACCCCAGATTTCCCCCTGTTAAACCTGAGGAGCTCGATGATATAGATGTTGAGGTCAGTGTACT
GACACCACCGGAGCCCCTTGAGGTTGAAAGCCCGGCAGATTACCCCAGCCTCATAAGGGTCGGTGTCGACGGTCTGATCG
TTGAGAGGGGATGGGCCAGGGGACTTCTCCTTCCACAGGTCGCCACGGAGTGGGGCTGGGACGCTGAGGAGTTCCTCTGC
AACACATGTATGAAGGCGGGTCTTCCGCCAGACTGCTTCTATGACCCTGAAACCAGAGTCTACAGGTTCCAGGCCCAGAT
ATTCCATGAAGATGGTTAA

Upstream 100 bases:

>100_bases
TCAGGCTGGGGATTGGCTTCTGCGGGAAATCCGGGCAGAGCGTCCCTGTGGGCGATGGGGGCCCCCACGTGAGGATAAGG
AATGCCATGGTGGGTGGAAC

Downstream 100 bases:

>100_bases
AGTTCATGCTGAAGCTAACTGCTCATGAGGGGATTAAAGATATCTCCGCACATCAAGATAAATAGATCCACAGAAGTTAC
AGGTTTAATGAGAGTGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MKYAPLSRDEGRTLVKIARMAIEEHLRGSKNLRLPDDLPDVFRQRRGVFVTLEKKGNLRGCIGYPEPVKPLIDALIEAAI
SAATGDPRFPPVKPEELDDIDVEVSVLTPPEPLEVESPADYPSLIRVGVDGLIVERGWARGLLLPQVATEWGWDAEEFLC
NTCMKAGLPPDCFYDPETRVYRFQAQIFHEDG

Sequences:

>Translated_192_residues
MKYAPLSRDEGRTLVKIARMAIEEHLRGSKNLRLPDDLPDVFRQRRGVFVTLEKKGNLRGCIGYPEPVKPLIDALIEAAI
SAATGDPRFPPVKPEELDDIDVEVSVLTPPEPLEVESPADYPSLIRVGVDGLIVERGWARGLLLPQVATEWGWDAEEFLC
NTCMKAGLPPDCFYDPETRVYRFQAQIFHEDG
>Mature_192_residues
MKYAPLSRDEGRTLVKIARMAIEEHLRGSKNLRLPDDLPDVFRQRRGVFVTLEKKGNLRGCIGYPEPVKPLIDALIEAAI
SAATGDPRFPPVKPEELDDIDVEVSVLTPPEPLEVESPADYPSLIRVGVDGLIVERGWARGLLLPQVATEWGWDAEEFLC
NTCMKAGLPPDCFYDPETRVYRFQAQIFHEDG

Specific function: Unknown

COG id: COG2078

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 AMMECR1 domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y857_METTH (O26945)

Other databases:

- EMBL:   AE000666
- PIR:   D69214
- RefSeq:   NP_275994.1
- ProteinModelPortal:   O26945
- SMR:   O26945
- STRING:   O26945
- GeneID:   1471265
- GenomeReviews:   AE000666_GR
- KEGG:   mth:MTH857
- NMPDR:   fig|187420.1.peg.849
- eggNOG:   arNOG04748
- HOGENOM:   HBG624682
- OMA:   WDEEEFL
- ProtClustDB:   CLSK2750436
- BioCyc:   MTHE187420:MTH857-MONOMER
- HAMAP:   MF_00645
- InterPro:   IPR002733
- TIGRFAMs:   TIGR00296

Pfam domain/function: PF01871 AMMECR1

EC number: NA

Molecular weight: Translated: 21528; Mature: 21528

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS51112 AMMECR1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYAPLSRDEGRTLVKIARMAIEEHLRGSKNLRLPDDLPDVFRQRRGVFVTLEKKGNLRG
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCEEEEEECCCCEEE
CIGYPEPVKPLIDALIEAAISAATGDPRFPPVKPEELDDIDVEVSVLTPPEPLEVESPAD
ECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC
YPSLIRVGVDGLIVERGWARGLLLPQVATEWGWDAEEFLCNTCMKAGLPPDCFYDPETRV
CHHHHHHCCCEEEEECCCCCCEECHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCE
YRFQAQIFHEDG
EEEEEEEEECCC
>Mature Secondary Structure
MKYAPLSRDEGRTLVKIARMAIEEHLRGSKNLRLPDDLPDVFRQRRGVFVTLEKKGNLRG
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCEEEEEECCCCEEE
CIGYPEPVKPLIDALIEAAISAATGDPRFPPVKPEELDDIDVEVSVLTPPEPLEVESPAD
ECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC
YPSLIRVGVDGLIVERGWARGLLLPQVATEWGWDAEEFLCNTCMKAGLPPDCFYDPETRV
CHHHHHHCCCEEEEECCCCCCEECHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCE
YRFQAQIFHEDG
EEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463