| Definition | Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome. |
|---|---|
| Accession | NC_000916 |
| Length | 1,751,377 |
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Identifier: 15678788
GI number: 15678788
Start: 691108
End: 693297
Strand: Direct
Name: Not Available
Synonym: MTH763
Alternate gene names: NA
Gene position: 691108-693297 (Clockwise)
Preceding gene: 15678784
Following gene: 15678793
Centisome position: 39.46
GC content: 51.64
Gene sequence:
>2190_bases ATGAGGAATACCATGATTCAGTCATGTAATGAATGTAAGGGTAAAGGTTACCGTGTTAAGAGTTACAAGATATGCAGCGC ATGCCATGGAACAGGTTTCAGATCAACAGAGGATATAAAGGATCATTTCAAGGGTGTTTCAAACAGTGCAAGGCAGAGGT TCGACCTCGAGGACTCCCATGAGGTCCCCTGTGAGGTATGCAGGGGTAAGGGTGAGGTGGAGGTGAGGGAAACCTGCCCC ACCTGTGGCGGTAAGGGTGAGGTTAACATCTGCCCATCATGTGGAAGGATGATGAAGGGTAGGGATGAGTACTGCCCGGA ATGTCAGAAGAAGGAGAAGGTCTACATCCTCCACCCTGCATGCACAATGGACGACCTCGAGGTTGGAAGCATATACCGTG GGAAGATAACCAGGGTTGAAAAATATGGGGTCTTTGTGAGCCTCAACAGCCACGTCTGGGGACTCATGAGGGGATTGTTC CCAGACTACAAGGTGGGGGATGAACTATTCGTCAGGGTATCCCAGGTGAAACCCTACAAGGGCGAGGTGGACATGATCCC GGCCAGTATAAAGGGGCCCTACGAGGTTATCAAGTTAAAGAAGGACCTGCCAAGGACGAGGATAGCAGACATAGATACAA AGAGCCTTGGTAAAACCGTGCGGATAGTGGGGGAGGTCATTCAGATCCAGCAGACATCCGGTCCAACCATATTCACGGTA TCCGATGAAACCGGGACCACATGGGCTGCGGCCTTCGATGAGCCAGGTATAAGGGTCTACCCCCACATACAGATCGGCCA CATAGTTGAGGTTATAGGAGAGGTTAACCAGCACACAGGAAAGATTCAGATCGAATCCGAGTCAATTGAACGCCTCATAG GTAATGAAGCTGCGGAAGCCAGGCGGCTCATCGATGAGGCCATAGACAGGAGGGCTGAACCAGAAAGAAAGGACCTCTTA ATTGAAAGCGAAACCCTGGAAAAATTAAGACCAAAACTTGTGGAGGCGGCCAAGGCAATAAGGAGGGCCGTCTATGATGG AAGATCCATCCTTGTGAGGCACCATGCAGACGCTGATGGTATCTGTGCCGGTGTTGCCATTGAAAAGGCTGTTTTACCCC TCCTCCGTGACCTCAACCCCAGCACAGATGCTGAGTGGCACTACTTCAAGAGGGCCCCCAGCAAGGCACCCTTCTATGAA CTCGAGGACGTTGTGAAGGACCTCTCATATGCCCTGGAGGACCTCGAGAGGCACGGGCAGAAACTGCCGCTCCTTGTACT GCTTGATAACGGGTCGACAGAGGAGGATATACTTGCCCTCATGAAGGCCAAGATATATGACATTGAAATCGTGGTTGTGG ACCACCACTACCCTGGCGAGGTCCAGGATGGACGTGTTGAGGTTGATGAATATGTTGACACCCACGTGAATCCATACCTG GTCGGTGGCGACTCCCAGATAACTGCGGGGTCGCTGTCAGTGGAGATAGCCAAGATGATAAACCCTGAAATTGCAGAGAG GATTCTCCATCTCCCTGGTATCGCTGCGGTTGGTGACCATGCGAACTCCCCTGAGGCCGAGGCCTACATTGAACTTGCAG CAGAGCGCGGCTATGAAAGGGAGGACCTTGAAAGGATCGCCGCATGTATAGACTTCGAGGCCTTCTACCTCAGGTTCATG AACGGGAGGGGCATCATCGACACCATACTTGGGCTTGGAAGTCTTGATAAACACAAGAAACTGGTTGATGCGCTCTACAG GGAATACGAGAGGAAGGTTGACACCCAGCTCAGGGCAGCCATACCCAACCTCAAATCCACAAGGCTGCCCAACGGGATAC TCTTCAATGTCCTGGATGTTGAGAAGTACTCACACCGCTTCACATTCCCTGCCCCGGGGAAGACCTGTGGATTCGTCCAT GATTACATGGTCCAGAAGCATGGTGAGGACACACCCATAATCACCCTGGCCTACGGACCTGACTTCGGTGTTATAAGGGC CACTGATGCTGTCAATGAGAAATTTGGATTTAACCTCAACGAGATAGTCTGGGAACTCGCAGAGGAGATCCCAGAGGCAG TGATAGATGGTGGTGGCCATGAATGTGCCGGTTCACTCAAGTATATTGAGGGACTCTCAAAGAAGGTGCTATCAGCCTTT GCAGAGAAGGTTGCAGCCCTTAAGGGGTGA
Upstream 100 bases:
>100_bases GATCAAACATTCATAACCTCCCTCTCAGGGCACACAAATATATATGGATTCCAGTTTAATATAATAAACCTAACATTTAT CATTTAAATAAATCGTTTCT
Downstream 100 bases:
>100_bases TCCCTCTGACCACTAAATAAGATTGAAACAGGGCATGGAGCCATGAGTGGCGTTAAATTTTCTGGAGCATGGCCTAAACT TTCTTTTTGCCCTCTTCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 729; Mature: 729
Protein sequence:
>729_residues MRNTMIQSCNECKGKGYRVKSYKICSACHGTGFRSTEDIKDHFKGVSNSARQRFDLEDSHEVPCEVCRGKGEVEVRETCP TCGGKGEVNICPSCGRMMKGRDEYCPECQKKEKVYILHPACTMDDLEVGSIYRGKITRVEKYGVFVSLNSHVWGLMRGLF PDYKVGDELFVRVSQVKPYKGEVDMIPASIKGPYEVIKLKKDLPRTRIADIDTKSLGKTVRIVGEVIQIQQTSGPTIFTV SDETGTTWAAAFDEPGIRVYPHIQIGHIVEVIGEVNQHTGKIQIESESIERLIGNEAAEARRLIDEAIDRRAEPERKDLL IESETLEKLRPKLVEAAKAIRRAVYDGRSILVRHHADADGICAGVAIEKAVLPLLRDLNPSTDAEWHYFKRAPSKAPFYE LEDVVKDLSYALEDLERHGQKLPLLVLLDNGSTEEDILALMKAKIYDIEIVVVDHHYPGEVQDGRVEVDEYVDTHVNPYL VGGDSQITAGSLSVEIAKMINPEIAERILHLPGIAAVGDHANSPEAEAYIELAAERGYEREDLERIAACIDFEAFYLRFM NGRGIIDTILGLGSLDKHKKLVDALYREYERKVDTQLRAAIPNLKSTRLPNGILFNVLDVEKYSHRFTFPAPGKTCGFVH DYMVQKHGEDTPIITLAYGPDFGVIRATDAVNEKFGFNLNEIVWELAEEIPEAVIDGGGHECAGSLKYIEGLSKKVLSAF AEKVAALKG
Sequences:
>Translated_729_residues MRNTMIQSCNECKGKGYRVKSYKICSACHGTGFRSTEDIKDHFKGVSNSARQRFDLEDSHEVPCEVCRGKGEVEVRETCP TCGGKGEVNICPSCGRMMKGRDEYCPECQKKEKVYILHPACTMDDLEVGSIYRGKITRVEKYGVFVSLNSHVWGLMRGLF PDYKVGDELFVRVSQVKPYKGEVDMIPASIKGPYEVIKLKKDLPRTRIADIDTKSLGKTVRIVGEVIQIQQTSGPTIFTV SDETGTTWAAAFDEPGIRVYPHIQIGHIVEVIGEVNQHTGKIQIESESIERLIGNEAAEARRLIDEAIDRRAEPERKDLL IESETLEKLRPKLVEAAKAIRRAVYDGRSILVRHHADADGICAGVAIEKAVLPLLRDLNPSTDAEWHYFKRAPSKAPFYE LEDVVKDLSYALEDLERHGQKLPLLVLLDNGSTEEDILALMKAKIYDIEIVVVDHHYPGEVQDGRVEVDEYVDTHVNPYL VGGDSQITAGSLSVEIAKMINPEIAERILHLPGIAAVGDHANSPEAEAYIELAAERGYEREDLERIAACIDFEAFYLRFM NGRGIIDTILGLGSLDKHKKLVDALYREYERKVDTQLRAAIPNLKSTRLPNGILFNVLDVEKYSHRFTFPAPGKTCGFVH DYMVQKHGEDTPIITLAYGPDFGVIRATDAVNEKFGFNLNEIVWELAEEIPEAVIDGGGHECAGSLKYIEGLSKKVLSAF AEKVAALKG >Mature_729_residues MRNTMIQSCNECKGKGYRVKSYKICSACHGTGFRSTEDIKDHFKGVSNSARQRFDLEDSHEVPCEVCRGKGEVEVRETCP TCGGKGEVNICPSCGRMMKGRDEYCPECQKKEKVYILHPACTMDDLEVGSIYRGKITRVEKYGVFVSLNSHVWGLMRGLF PDYKVGDELFVRVSQVKPYKGEVDMIPASIKGPYEVIKLKKDLPRTRIADIDTKSLGKTVRIVGEVIQIQQTSGPTIFTV SDETGTTWAAAFDEPGIRVYPHIQIGHIVEVIGEVNQHTGKIQIESESIERLIGNEAAEARRLIDEAIDRRAEPERKDLL IESETLEKLRPKLVEAAKAIRRAVYDGRSILVRHHADADGICAGVAIEKAVLPLLRDLNPSTDAEWHYFKRAPSKAPFYE LEDVVKDLSYALEDLERHGQKLPLLVLLDNGSTEEDILALMKAKIYDIEIVVVDHHYPGEVQDGRVEVDEYVDTHVNPYL VGGDSQITAGSLSVEIAKMINPEIAERILHLPGIAAVGDHANSPEAEAYIELAAERGYEREDLERIAACIDFEAFYLRFM NGRGIIDTILGLGSLDKHKKLVDALYREYERKVDTQLRAAIPNLKSTRLPNGILFNVLDVEKYSHRFTFPAPGKTCGFVH DYMVQKHGEDTPIITLAYGPDFGVIRATDAVNEKFGFNLNEIVWELAEEIPEAVIDGGGHECAGSLKYIEGLSKKVLSAF AEKVAALKG
Specific function: Unknown
COG id: COG1107
COG function: function code L; Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 S1 motif domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001305 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR004365 - InterPro: IPR001667 - InterPro: IPR003029 - InterPro: IPR022967 [H]
Pfam domain/function: PF01368 DHH; PF00575 S1; PF01336 tRNA_anti [H]
EC number: NA
Molecular weight: Translated: 81319; Mature: 81319
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS50126 S1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNTMIQSCNECKGKGYRVKSYKICSACHGTGFRSTEDIKDHFKGVSNSARQRFDLEDSH CCCHHHHHHHHHCCCCEEEEEEEHHHHHCCCCCCCHHHHHHHHHCCCHHHHHCCCCCCCC EVPCEVCRGKGEVEVRETCPTCGGKGEVNICPSCGRMMKGRDEYCPECQKKEKVYILHPA CCCHHHHCCCCCEEEHHCCCCCCCCCCEEECCHHHHHHCCCCCCCCCCCCCCCEEEECCC CTMDDLEVGSIYRGKITRVEKYGVFVSLNSHVWGLMRGLFPDYKVGDELFVRVSQVKPYK CCCCCCCCCCEECCCEEEEEECEEEEEECCHHHHHHHHCCCCCCCCHHHHEEHHHCCCCC GEVDMIPASIKGPYEVIKLKKDLPRTRIADIDTKSLGKTVRIVGEVIQIQQTSGPTIFTV CCEEECCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCEEEEE SDETGTTWAAAFDEPGIRVYPHIQIGHIVEVIGEVNQHTGKIQIESESIERLIGNEAAEA ECCCCCEEEEECCCCCCEEECCEEHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCHHHHH RRLIDEAIDRRAEPERKDLLIESETLEKLRPKLVEAAKAIRRAVYDGRSILVRHHADADG HHHHHHHHHCCCCCCHHHEEECHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC ICAGVAIEKAVLPLLRDLNPSTDAEWHYFKRAPSKAPFYELEDVVKDLSYALEDLERHGQ EEHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC KLPLLVLLDNGSTEEDILALMKAKIYDIEIVVVDHHYPGEVQDGRVEVDEYVDTHVNPYL CCCEEEEECCCCCHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCCEEHHHHHHCCCCEEE VGGDSQITAGSLSVEIAKMINPEIAERILHLPGIAAVGDHANSPEAEAYIELAAERGYER ECCCCCEECCCHHHHHHHHCCHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHCCCCH EDLERIAACIDFEAFYLRFMNGRGIIDTILGLGSLDKHKKLVDALYREYERKVDTQLRAA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IPNLKSTRLPNGILFNVLDVEKYSHRFTFPAPGKTCGFVHDYMVQKHGEDTPIITLAYGP CCCCCCCCCCCCEEEEEEEHHHHCCEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEEECC DFGVIRATDAVNEKFGFNLNEIVWELAEEIPEAVIDGGGHECAGSLKYIEGLSKKVLSAF CCCEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH AEKVAALKG HHHHHHCCC >Mature Secondary Structure MRNTMIQSCNECKGKGYRVKSYKICSACHGTGFRSTEDIKDHFKGVSNSARQRFDLEDSH CCCHHHHHHHHHCCCCEEEEEEEHHHHHCCCCCCCHHHHHHHHHCCCHHHHHCCCCCCCC EVPCEVCRGKGEVEVRETCPTCGGKGEVNICPSCGRMMKGRDEYCPECQKKEKVYILHPA CCCHHHHCCCCCEEEHHCCCCCCCCCCEEECCHHHHHHCCCCCCCCCCCCCCCEEEECCC CTMDDLEVGSIYRGKITRVEKYGVFVSLNSHVWGLMRGLFPDYKVGDELFVRVSQVKPYK CCCCCCCCCCEECCCEEEEEECEEEEEECCHHHHHHHHCCCCCCCCHHHHEEHHHCCCCC GEVDMIPASIKGPYEVIKLKKDLPRTRIADIDTKSLGKTVRIVGEVIQIQQTSGPTIFTV CCEEECCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCEEEEE SDETGTTWAAAFDEPGIRVYPHIQIGHIVEVIGEVNQHTGKIQIESESIERLIGNEAAEA ECCCCCEEEEECCCCCCEEECCEEHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCHHHHH RRLIDEAIDRRAEPERKDLLIESETLEKLRPKLVEAAKAIRRAVYDGRSILVRHHADADG HHHHHHHHHCCCCCCHHHEEECHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC ICAGVAIEKAVLPLLRDLNPSTDAEWHYFKRAPSKAPFYELEDVVKDLSYALEDLERHGQ EEHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC KLPLLVLLDNGSTEEDILALMKAKIYDIEIVVVDHHYPGEVQDGRVEVDEYVDTHVNPYL CCCEEEEECCCCCHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCCEEHHHHHHCCCCEEE VGGDSQITAGSLSVEIAKMINPEIAERILHLPGIAAVGDHANSPEAEAYIELAAERGYER ECCCCCEECCCHHHHHHHHCCHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHCCCCH EDLERIAACIDFEAFYLRFMNGRGIIDTILGLGSLDKHKKLVDALYREYERKVDTQLRAA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IPNLKSTRLPNGILFNVLDVEKYSHRFTFPAPGKTCGFVHDYMVQKHGEDTPIITLAYGP CCCCCCCCCCCCEEEEEEEHHHHCCEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEEECC DFGVIRATDAVNEKFGFNLNEIVWELAEEIPEAVIDGGGHECAGSLKYIEGLSKKVLSAF CCCEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH AEKVAALKG HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]