| Definition | Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome. |
|---|---|
| Accession | NC_000916 |
| Length | 1,751,377 |
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Identifier: 15678659
GI number: 15678659
Start: 561418
End: 562395
Strand: Direct
Name: Not Available
Synonym: MTH631
Alternate gene names: 15678659
Gene position: 561418-562395 (Clockwise)
Preceding gene: 15678657
Following gene: 15678660
Centisome position: 32.06
GC content: 52.76
Gene sequence:
>978_bases ATGATACTAATCGTTGGCGGAGCAGGATACATCGGGTCACATGTCAATAAATTTCTATCAGAGAGGGGATACGAAACCCT CATCCTTGATAACCTCACAAGGGGCCACAGGGATTTTGTTAAGTGGGGTGAATTCATAGAGGGTAACCTGGGTGATAGGA GACTCCTTGACAGGACCTTTGAAACCCATGACGTGGATGCGGTCATGCACTTCGCAGCATTCACAGATGTCGGTGAATCG GTCCTCAAACCAGGAAGGTACTACCATAACAACGTCGTGAACACCATAAACCTCCTGGATTCCATGGTGGACCATGGCGT CAGGGACTTCATATTTTCATCCACCTGTGCAGTCTACGGGAACCCCATGGAGATACCAATAAGCGAGGAACACCCCCTCA ACCCCATAAGCCCCTATGGCAGATCCAAACTCATGGTTGAGGAGATACTGGGGGACTACAGGGATGCCTATGGTCTCAAC TATGTCTCGCTCCGCTACTTCAATGCAGCCGGAGCAGACCCTGAAGGAGAGGTGGGGGAGCTTCATAACCCTGAAACGCA CCTCATACCCATCGTCCTGGATGTTGCCCTGGGTCTGCGGGACGCCGTGCGGATATTCGGCACAGATTACCCAACACCCG ACGGAACATGTGTGAGGGACTACATCCACGTTATGGACCTGGCAGATGCCCACTGGAGGGCGCTCAGATACCTTGAGGGT GGAGAAAGCGGGGTTTTCAACCTTGGAAACGGGAACGGCTTCTCAGTCATGGAGGTTATAGAGACCTGCAGGGAGGTCAC AGGTGCCAGTATAAATGCTGTTGAGGATGACAGAAGACCAGGTGATCCACCGGAACTCGTGGGCAGTGCCGGTAGGGCCA GGAGGGTCCTTGGCTGGAGGCCGGAATTCACAGAACTCGAGGATATAATAGAAACCGCATGGAACTGGCATTCAAGGATC AGAGGGGGGATCTCATGA
Upstream 100 bases:
>100_bases ATGCAAAGGCAGACCACAAAGACCTACCCACAAAAACAGGCCACCAAACCTTATTTACATGTTAACAGAAATATAGACAG AATCATATCTGTGTGATAAA
Downstream 100 bases:
>100_bases TAACCGTCACAGGAGATATAACCGTTGACTGGATACAGTGGTCCGTTAAGGGAGACTCTGATGTCTCAGAATTTAACTGG AAGAACCACCTTGGATTCAA
Product: UDP-glucose 4-epimerase
Products: NA
Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MILIVGGAGYIGSHVNKFLSERGYETLILDNLTRGHRDFVKWGEFIEGNLGDRRLLDRTFETHDVDAVMHFAAFTDVGES VLKPGRYYHNNVVNTINLLDSMVDHGVRDFIFSSTCAVYGNPMEIPISEEHPLNPISPYGRSKLMVEEILGDYRDAYGLN YVSLRYFNAAGADPEGEVGELHNPETHLIPIVLDVALGLRDAVRIFGTDYPTPDGTCVRDYIHVMDLADAHWRALRYLEG GESGVFNLGNGNGFSVMEVIETCREVTGASINAVEDDRRPGDPPELVGSAGRARRVLGWRPEFTELEDIIETAWNWHSRI RGGIS
Sequences:
>Translated_325_residues MILIVGGAGYIGSHVNKFLSERGYETLILDNLTRGHRDFVKWGEFIEGNLGDRRLLDRTFETHDVDAVMHFAAFTDVGES VLKPGRYYHNNVVNTINLLDSMVDHGVRDFIFSSTCAVYGNPMEIPISEEHPLNPISPYGRSKLMVEEILGDYRDAYGLN YVSLRYFNAAGADPEGEVGELHNPETHLIPIVLDVALGLRDAVRIFGTDYPTPDGTCVRDYIHVMDLADAHWRALRYLEG GESGVFNLGNGNGFSVMEVIETCREVTGASINAVEDDRRPGDPPELVGSAGRARRVLGWRPEFTELEDIIETAWNWHSRI RGGIS >Mature_325_residues MILIVGGAGYIGSHVNKFLSERGYETLILDNLTRGHRDFVKWGEFIEGNLGDRRLLDRTFETHDVDAVMHFAAFTDVGES VLKPGRYYHNNVVNTINLLDSMVDHGVRDFIFSSTCAVYGNPMEIPISEEHPLNPISPYGRSKLMVEEILGDYRDAYGLN YVSLRYFNAAGADPEGEVGELHNPETHLIPIVLDVALGLRDAVRIFGTDYPTPDGTCVRDYIHVMDLADAHWRALRYLEG GESGVFNLGNGNGFSVMEVIETCREVTGASINAVEDDRRPGDPPELVGSAGRARRVLGWRPEFTELEDIIETAWNWHSRI RGGIS
Specific function: Galactose metabolism; third step. [C]
COG id: COG1087
COG function: function code M; UDP-glucose 4-epimerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sugar epimerase family [H]
Homologues:
Organism=Homo sapiens, GI56237023, Length=341, Percent_Identity=39.8826979472141, Blast_Score=225, Evalue=5e-59, Organism=Homo sapiens, GI56118217, Length=341, Percent_Identity=39.8826979472141, Blast_Score=225, Evalue=5e-59, Organism=Homo sapiens, GI189083684, Length=341, Percent_Identity=39.8826979472141, Blast_Score=225, Evalue=5e-59, Organism=Homo sapiens, GI7657641, Length=329, Percent_Identity=27.0516717325228, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI42516563, Length=307, Percent_Identity=23.7785016286645, Blast_Score=79, Evalue=4e-15, Organism=Escherichia coli, GI1786974, Length=333, Percent_Identity=43.2432432432432, Blast_Score=247, Evalue=8e-67, Organism=Escherichia coli, GI1788353, Length=351, Percent_Identity=29.0598290598291, Blast_Score=93, Evalue=3e-20, Organism=Escherichia coli, GI48994969, Length=336, Percent_Identity=28.5714285714286, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI1790049, Length=275, Percent_Identity=28.7272727272727, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1788366, Length=359, Percent_Identity=24.7910863509749, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788365, Length=345, Percent_Identity=24.6376811594203, Blast_Score=71, Evalue=8e-14, Organism=Caenorhabditis elegans, GI71982035, Length=347, Percent_Identity=37.7521613832853, Blast_Score=208, Evalue=3e-54, Organism=Caenorhabditis elegans, GI71982038, Length=349, Percent_Identity=37.2492836676218, Blast_Score=208, Evalue=4e-54, Organism=Caenorhabditis elegans, GI17568069, Length=326, Percent_Identity=29.4478527607362, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI133901786, Length=289, Percent_Identity=25.6055363321799, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17539422, Length=289, Percent_Identity=25.6055363321799, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI133901788, Length=289, Percent_Identity=25.6055363321799, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17539424, Length=289, Percent_Identity=25.6055363321799, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI133901790, Length=289, Percent_Identity=25.6055363321799, Blast_Score=75, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6319493, Length=339, Percent_Identity=41.2979351032448, Blast_Score=238, Evalue=1e-63, Organism=Drosophila melanogaster, GI19923002, Length=338, Percent_Identity=39.6449704142012, Blast_Score=238, Evalue=4e-63, Organism=Drosophila melanogaster, GI21356223, Length=307, Percent_Identity=24.1042345276873, Blast_Score=75, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001509 - InterPro: IPR005886 - InterPro: IPR016040 [H]
Pfam domain/function: PF01370 Epimerase [H]
EC number: =5.1.3.2 [H]
Molecular weight: Translated: 36269; Mature: 36269
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILIVGGAGYIGSHVNKFLSERGYETLILDNLTRGHRDFVKWGEFIEGNLGDRRLLDRTF CEEEEECCCHHHHHHHHHHHHCCCEEEEEHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHC ETHDVDAVMHFAAFTDVGESVLKPGRYYHNNVVNTINLLDSMVDHGVRDFIFSSTCAVYG CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCC NPMEIPISEEHPLNPISPYGRSKLMVEEILGDYRDAYGLNYVSLRYFNAAGADPEGEVGE CCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCC LHNPETHLIPIVLDVALGLRDAVRIFGTDYPTPDGTCVRDYIHVMDLADAHWRALRYLEG CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC GESGVFNLGNGNGFSVMEVIETCREVTGASINAVEDDRRPGDPPELVGSAGRARRVLGWR CCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHCCC PEFTELEDIIETAWNWHSRIRGGIS CCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MILIVGGAGYIGSHVNKFLSERGYETLILDNLTRGHRDFVKWGEFIEGNLGDRRLLDRTF CEEEEECCCHHHHHHHHHHHHCCCEEEEEHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHC ETHDVDAVMHFAAFTDVGESVLKPGRYYHNNVVNTINLLDSMVDHGVRDFIFSSTCAVYG CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCC NPMEIPISEEHPLNPISPYGRSKLMVEEILGDYRDAYGLNYVSLRYFNAAGADPEGEVGE CCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCC LHNPETHLIPIVLDVALGLRDAVRIFGTDYPTPDGTCVRDYIHVMDLADAHWRALRYLEG CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC GESGVFNLGNGNGFSVMEVIETCREVTGASINAVEDDRRPGDPPELVGSAGRARRVLGWR CCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHCCC PEFTELEDIIETAWNWHSRIRGGIS CCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]