| Definition | Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome. |
|---|---|
| Accession | NC_000916 |
| Length | 1,751,377 |
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Identifier: 15678579
GI number: 15678579
Start: 496698
End: 499259
Strand: Direct
Name: Not Available
Synonym: MTH551
Alternate gene names: NA
Gene position: 496698-499259 (Clockwise)
Preceding gene: 15678574
Following gene: 15678585
Centisome position: 28.36
GC content: 46.64
Gene sequence:
>2562_bases TTGAGTGATGGGAGGGCAAATCCTTCAGAGAAAGTGAACCTGAGCCTTGCTGAAGAATCTTTCATTACATTCCTCCAGGA TAATCTTCCTGATGACTGGAAAATCTATTTTAAACCTCATCTTAACGGTTCCTACCCTGACCTCATAATCATGAACCCCC ATGTCGGGATAATGATCTACAGTATCCTTGATGAAGTCAACTGCACCCCTGAAGCTGAAATAAGGCGACTGGGATATTAC AAGAAGAAGATAATACGGCAGCTGGTCCCATCCATGGGTGAGATGATTGATAAAGAGAGGAGCGCCTATGGTATCATCCG GACAGGTGTATATGTTCATGGACTATCCAGCAGGGAAGTTAAGGATAAGTTCAAATCTGGAGGGAGTTACCTTACCTGTG CCGGCCATGACAGCCTTCAGAAATCAAACCTGGAGGCCCTGATACCCGGTCTGAGGTTCCGTAAGAGCAAATACATGAAA CCTGAATGGGCATCGCAGCTTGAATCCTGGATGGTCCCCAGCTATCACAGGGAGAAAAGGACTGATATCAGGCTTACAGA GGAGCAGGAACGACATGTAAAGCCACAACCAGGACACAGAAGACTCAGAGGAGCTGCTGGGAGTGGTAAAACTCTGGTAA TAGCCCACAGAGCAGCGCGACTGGCTGCTGATGGGCACCGCGTACTCATAGTAACCTTTAACAGCACACTCTGGCAGTAT ATCAGGGAGATGGTGGATAGGACCCTCTACAACTTTGACTGGTCCCTCCTGACGTTCAGGCACTTCCACGGGTTCTGCTA CGACATTATACATGAGCTTAAAATCCCCTTTGACCAGGAGAGGGTTGTCGAGTGTCTCATAGGGTCAATCCGGGACCATG ATATTTCAGAATACATGTTTGATGCTGTCCTTATTGATGAGGGCCAGGATTTTGAGTGGGAATGGTACAACCTGCTATCC CAGTTCCTGACAGAAAGGGATGAACTGTTCTTTGTATGCGACGAAAGACAGAACATATATGACAGGGAGCTCAGCTGGGT CGACAAGATGTCAGGCGCAGGAAAGGTTAAGTTCCGGGGAAAATGGAGGGAACTTGGGACAGTTCATCGACTATCACCAA AGATAGCTGAATTTGCAAATAAATTTGCTCAAAGTTTCCTTAGATCAGGGGATAATGAATTAGATGTCAGCCAGAAAACC CTCTTTGATAACCGTGAAGCCGTGTGGAGAAACGTGGACCCCCATGACTGGCAGGATGAACTATATGACGCCTACAGTTC CCTCAGGGATATGGGTGTTCGTGACTCAGAAATAGCTGTACTGGTACCCACCAATGATATGGGTGTGAAGGTTGCTGAAT TCTTCAGATCAATGAACGTGAAAACCGACCACCTCTTCAGGAAGAATGGTGCCGGTAACAAGAGGGTATTCGTATCCGAT GGGCGGATGAAGATAAGCACAATACACAGCTTCAAGGGATGGGAAGCAAGAAGTGTGATAATCTGGATACCTGACAGATG GGGACAGGAAGAGAACCTTGACGCAGTCATATACACCGCGATAACCAGGACCCTTGAAAACCTCATCATACTGAACACCA ATGAAAGGTACCTTGAATTCTATGAAAACGATGAGGACGTTGAAATTCCCGATATAACTGAAGATGAGATGGACCCTGAA CTTGAGGAATGGATTGAGACACTCCCGTACCCACTCGCCTCCATCATCTGGGAGAGCATGACCATAACGAGCTATGAGAG CAGGGTCAGATATCTCATTCACTTCTTTGAGGCCCTTGCAGAGTTCAACTTCAACCTCATTATGAGCGGTCTATCCTCTG ACGAATTCTTCTTTGATATGAGGGTTAGGGAAACCTTTGGAGGTGTTAAAAATAATCTTGAAAGGCCCACCTTCGGGTAC TGGACGGCACTCCTCTTCAGGGCAATCAGAAGCCTGAGGATGGTGCTGAATGATAGGTACCATAAAAACCAGGTCCGCAA ATCCTTTGGAAAGCCAGATGATGACTTTATAAATGCACTGGCCAACAGCAAGCTCCCTGTAATACTGAAAAATGTTTTAA AGTACCGTAACGTCTGGGAGGGGCATGGCCCGCGAGTTTCCGAGGATGAATACCGTAAACGTTACAGTGTACTGATAGGG GAGCTAAGGAATGTTAAGGATGTGATCGGGGACATTTACACCCGCAATTTCCTGGTCATCCCCAGTGAGGGAATCCTGGA TGGTGGTGTGCACCGGTACACAGCAAAGCGTTACATGACAACGAGGGCCCCCTTCAGGGCTGTGAAACTGGAAAGTGAGA AACCCATGGACATTAACAGTATATACCTTGCAAACCCAAACAAGAGGAGGCACCTGGAACTCCTGCCCCTTATAATCAAT AATGATGACACCTGCTACTTCTACAACGGGATTGATGATGAAACTGGTAAGGCGAGGTACTGTTCCTACCATAACAAGGA CAAGGCTGAAATATTTGTAAACCCACCTCCTAAACTTGTAAATCTGCAAGAAATGCTGAATCAAACTGACTCCTACAATT AA
Upstream 100 bases:
>100_bases CATCATTAACCAGACTTTTGGTTCAGGGAAACAGTAAATTTATTAATCGTGTGGATTGAATTAATCATGTAAATGAATAT ACTGTGGTGGGGGTTTTCAT
Downstream 100 bases:
>100_bases TCTCCAGGCTTCATATGAGATAACTCTCTTTATTCCCAGATACATTCCCATGCAGATTTGCAGAGGAGCCTGAGACCATT GATGATTTTGAAGAAACATT
Product: DNA helicase II related protein
Products: NA
Alternate protein names: DNA Helicase II Related Protein; NERD Domain Protein; NERD Domain-Containing Protein; Superfamily I DNA And RNA Helicase; Nerd Domain Protein; UvrD/REP Helicase; Helicase Protein; N-6 DNA Methylase; ATP-Dependent Helicase; DNA Helicase; Nuclease-Related Domain Protein
Number of amino acids: Translated: 853; Mature: 852
Protein sequence:
>853_residues MSDGRANPSEKVNLSLAEESFITFLQDNLPDDWKIYFKPHLNGSYPDLIIMNPHVGIMIYSILDEVNCTPEAEIRRLGYY KKKIIRQLVPSMGEMIDKERSAYGIIRTGVYVHGLSSREVKDKFKSGGSYLTCAGHDSLQKSNLEALIPGLRFRKSKYMK PEWASQLESWMVPSYHREKRTDIRLTEEQERHVKPQPGHRRLRGAAGSGKTLVIAHRAARLAADGHRVLIVTFNSTLWQY IREMVDRTLYNFDWSLLTFRHFHGFCYDIIHELKIPFDQERVVECLIGSIRDHDISEYMFDAVLIDEGQDFEWEWYNLLS QFLTERDELFFVCDERQNIYDRELSWVDKMSGAGKVKFRGKWRELGTVHRLSPKIAEFANKFAQSFLRSGDNELDVSQKT LFDNREAVWRNVDPHDWQDELYDAYSSLRDMGVRDSEIAVLVPTNDMGVKVAEFFRSMNVKTDHLFRKNGAGNKRVFVSD GRMKISTIHSFKGWEARSVIIWIPDRWGQEENLDAVIYTAITRTLENLIILNTNERYLEFYENDEDVEIPDITEDEMDPE LEEWIETLPYPLASIIWESMTITSYESRVRYLIHFFEALAEFNFNLIMSGLSSDEFFFDMRVRETFGGVKNNLERPTFGY WTALLFRAIRSLRMVLNDRYHKNQVRKSFGKPDDDFINALANSKLPVILKNVLKYRNVWEGHGPRVSEDEYRKRYSVLIG ELRNVKDVIGDIYTRNFLVIPSEGILDGGVHRYTAKRYMTTRAPFRAVKLESEKPMDINSIYLANPNKRRHLELLPLIIN NDDTCYFYNGIDDETGKARYCSYHNKDKAEIFVNPPPKLVNLQEMLNQTDSYN
Sequences:
>Translated_853_residues MSDGRANPSEKVNLSLAEESFITFLQDNLPDDWKIYFKPHLNGSYPDLIIMNPHVGIMIYSILDEVNCTPEAEIRRLGYY KKKIIRQLVPSMGEMIDKERSAYGIIRTGVYVHGLSSREVKDKFKSGGSYLTCAGHDSLQKSNLEALIPGLRFRKSKYMK PEWASQLESWMVPSYHREKRTDIRLTEEQERHVKPQPGHRRLRGAAGSGKTLVIAHRAARLAADGHRVLIVTFNSTLWQY IREMVDRTLYNFDWSLLTFRHFHGFCYDIIHELKIPFDQERVVECLIGSIRDHDISEYMFDAVLIDEGQDFEWEWYNLLS QFLTERDELFFVCDERQNIYDRELSWVDKMSGAGKVKFRGKWRELGTVHRLSPKIAEFANKFAQSFLRSGDNELDVSQKT LFDNREAVWRNVDPHDWQDELYDAYSSLRDMGVRDSEIAVLVPTNDMGVKVAEFFRSMNVKTDHLFRKNGAGNKRVFVSD GRMKISTIHSFKGWEARSVIIWIPDRWGQEENLDAVIYTAITRTLENLIILNTNERYLEFYENDEDVEIPDITEDEMDPE LEEWIETLPYPLASIIWESMTITSYESRVRYLIHFFEALAEFNFNLIMSGLSSDEFFFDMRVRETFGGVKNNLERPTFGY WTALLFRAIRSLRMVLNDRYHKNQVRKSFGKPDDDFINALANSKLPVILKNVLKYRNVWEGHGPRVSEDEYRKRYSVLIG ELRNVKDVIGDIYTRNFLVIPSEGILDGGVHRYTAKRYMTTRAPFRAVKLESEKPMDINSIYLANPNKRRHLELLPLIIN NDDTCYFYNGIDDETGKARYCSYHNKDKAEIFVNPPPKLVNLQEMLNQTDSYN >Mature_852_residues SDGRANPSEKVNLSLAEESFITFLQDNLPDDWKIYFKPHLNGSYPDLIIMNPHVGIMIYSILDEVNCTPEAEIRRLGYYK KKIIRQLVPSMGEMIDKERSAYGIIRTGVYVHGLSSREVKDKFKSGGSYLTCAGHDSLQKSNLEALIPGLRFRKSKYMKP EWASQLESWMVPSYHREKRTDIRLTEEQERHVKPQPGHRRLRGAAGSGKTLVIAHRAARLAADGHRVLIVTFNSTLWQYI REMVDRTLYNFDWSLLTFRHFHGFCYDIIHELKIPFDQERVVECLIGSIRDHDISEYMFDAVLIDEGQDFEWEWYNLLSQ FLTERDELFFVCDERQNIYDRELSWVDKMSGAGKVKFRGKWRELGTVHRLSPKIAEFANKFAQSFLRSGDNELDVSQKTL FDNREAVWRNVDPHDWQDELYDAYSSLRDMGVRDSEIAVLVPTNDMGVKVAEFFRSMNVKTDHLFRKNGAGNKRVFVSDG RMKISTIHSFKGWEARSVIIWIPDRWGQEENLDAVIYTAITRTLENLIILNTNERYLEFYENDEDVEIPDITEDEMDPEL EEWIETLPYPLASIIWESMTITSYESRVRYLIHFFEALAEFNFNLIMSGLSSDEFFFDMRVRETFGGVKNNLERPTFGYW TALLFRAIRSLRMVLNDRYHKNQVRKSFGKPDDDFINALANSKLPVILKNVLKYRNVWEGHGPRVSEDEYRKRYSVLIGE LRNVKDVIGDIYTRNFLVIPSEGILDGGVHRYTAKRYMTTRAPFRAVKLESEKPMDINSIYLANPNKRRHLELLPLIINN DDTCYFYNGIDDETGKARYCSYHNKDKAEIFVNPPPKLVNLQEMLNQTDSYN
Specific function: Unknown
COG id: COG0210
COG function: function code L; Superfamily I DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 99811; Mature: 99679
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: PS00024 HEMOPEXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDGRANPSEKVNLSLAEESFITFLQDNLPDDWKIYFKPHLNGSYPDLIIMNPHVGIMIY CCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEECCCHHHHHH SILDEVNCTPEAEIRRLGYYKKKIIRQLVPSMGEMIDKERSAYGIIRTGVYVHGLSSREV HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCEEEECCCCHHH KDKFKSGGSYLTCAGHDSLQKSNLEALIPGLRFRKSKYMKPEWASQLESWMVPSYHREKR HHHHHCCCCEEEECCCCCHHHCCHHHHCCCHHHHHHCCCCCHHHHHHHHHCCCCHHHCCC TDIRLTEEQERHVKPQPGHRRLRGAAGSGKTLVIAHRAARLAADGHRVLIVTFNSTLWQY CCCEECCHHHHCCCCCCCHHHHCCCCCCCCEEEEEEHHHHHHCCCCEEEEEEECHHHHHH IREMVDRTLYNFDWSLLTFRHFHGFCYDIIHELKIPFDQERVVECLIGSIRDHDISEYMF HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHH DAVLIDEGQDFEWEWYNLLSQFLTERDELFFVCDERQNIYDRELSWVDKMSGAGKVKFRG HEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEECC KWRELGTVHRLSPKIAEFANKFAQSFLRSGDNELDVSQKTLFDNREAVWRNVDPHDWQDE CHHHHCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHCCCCCCCHHHH LYDAYSSLRDMGVRDSEIAVLVPTNDMGVKVAEFFRSMNVKTDHLFRKNGAGNKRVFVSD HHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEC GRMKISTIHSFKGWEARSVIIWIPDRWGQEENLDAVIYTAITRTLENLIILNTNERYLEF CCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCHHHHHE YENDEDVEIPDITEDEMDPELEEWIETLPYPLASIIWESMTITSYESRVRYLIHFFEALA ECCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHEEHHHHHHHHHHHHHHHHHH EFNFNLIMSGLSSDEFFFDMRVRETFGGVKNNLERPTFGYWTALLFRAIRSLRMVLNDRY HCCHHHEEECCCCCCEEEEEHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHH HKNQVRKSFGKPDDDFINALANSKLPVILKNVLKYRNVWEGHGPRVSEDEYRKRYSVLIG HHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH ELRNVKDVIGDIYTRNFLVIPSEGILDGGVHRYTAKRYMTTRAPFRAVKLESEKPMDINS HHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCE IYLANPNKRRHLELLPLIINNDDTCYFYNGIDDETGKARYCSYHNKDKAEIFVNPPPKLV EEEECCCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCEE NLQEMLNQTDSYN CHHHHHHHCCCCC >Mature Secondary Structure SDGRANPSEKVNLSLAEESFITFLQDNLPDDWKIYFKPHLNGSYPDLIIMNPHVGIMIY CCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEECCCHHHHHH SILDEVNCTPEAEIRRLGYYKKKIIRQLVPSMGEMIDKERSAYGIIRTGVYVHGLSSREV HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCEEEECCCCHHH KDKFKSGGSYLTCAGHDSLQKSNLEALIPGLRFRKSKYMKPEWASQLESWMVPSYHREKR HHHHHCCCCEEEECCCCCHHHCCHHHHCCCHHHHHHCCCCCHHHHHHHHHCCCCHHHCCC TDIRLTEEQERHVKPQPGHRRLRGAAGSGKTLVIAHRAARLAADGHRVLIVTFNSTLWQY CCCEECCHHHHCCCCCCCHHHHCCCCCCCCEEEEEEHHHHHHCCCCEEEEEEECHHHHHH IREMVDRTLYNFDWSLLTFRHFHGFCYDIIHELKIPFDQERVVECLIGSIRDHDISEYMF HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHH DAVLIDEGQDFEWEWYNLLSQFLTERDELFFVCDERQNIYDRELSWVDKMSGAGKVKFRG HEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEECC KWRELGTVHRLSPKIAEFANKFAQSFLRSGDNELDVSQKTLFDNREAVWRNVDPHDWQDE CHHHHCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHCCCCCCCHHHH LYDAYSSLRDMGVRDSEIAVLVPTNDMGVKVAEFFRSMNVKTDHLFRKNGAGNKRVFVSD HHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEC GRMKISTIHSFKGWEARSVIIWIPDRWGQEENLDAVIYTAITRTLENLIILNTNERYLEF CCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCHHHHHE YENDEDVEIPDITEDEMDPELEEWIETLPYPLASIIWESMTITSYESRVRYLIHFFEALA ECCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHEEHHHHHHHHHHHHHHHHHH EFNFNLIMSGLSSDEFFFDMRVRETFGGVKNNLERPTFGYWTALLFRAIRSLRMVLNDRY HCCHHHEEECCCCCCEEEEEHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHH HKNQVRKSFGKPDDDFINALANSKLPVILKNVLKYRNVWEGHGPRVSEDEYRKRYSVLIG HHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH ELRNVKDVIGDIYTRNFLVIPSEGILDGGVHRYTAKRYMTTRAPFRAVKLESEKPMDINS HHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCE IYLANPNKRRHLELLPLIINNDDTCYFYNGIDDETGKARYCSYHNKDKAEIFVNPPPKLV EEEECCCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCEE NLQEMLNQTDSYN CHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA