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The map label for this gene is rpl30p

Identifier: 15678055

GI number: 15678055

Start: 11931

End: 12389

Strand: Direct

Name: rpl30p

Synonym: MTH24

Alternate gene names: 15678055

Gene position: 11931-12389 (Clockwise)

Preceding gene: 15678054

Following gene: 15678056

Centisome position: 0.68

GC content: 49.67

Gene sequence:

>459_bases
ATGTTCGCAGTAGTAAGGGTAAGGGGATCAGCAGGTGTTCGAAGGGACATAGCTGACACCATGGAAATGTTAAGGCTCAA
CAGGATAAACCACGCCGTCCTGGTTGAGGACACACCCAGCTACCTTGGCATGCTCCAGAAGGCCAAGGACTACATAACCT
GGGGTGAAGTCGACCAGGAAACCCTGACAGCCATGATAAGGAAGAGGGGAAGACTCATCGGGGGAGACAGGATAACCGAT
GAGTACATAAATGAGAAAACCGCTTACGGTTCCGTCGATGAGTTTGCTGCAGCCGTCTTCAGCGGCGAGGTTAAACTTGA
GGAAGCAGGAATAAAACCTGTATTCAGACTGCACCCCCCAAGAAAGGGATACGAAGGCATAAAAAAGGCCTTCAATGAGG
GCGGAAGCCTTGGATATCGCGGCGAAAAGATAAATGACCTTTTGAAAAGGATGATCTAG

Upstream 100 bases:

>100_bases
CAGGGCAACCTTCGACGCCCTCAAACAGCTGAGCAAAGTAAAGGCAAGCGAGAAGGACCTTAAGAACCTCGGTGTTTGCA
GTACCTGAAGGTGATTCTAG

Downstream 100 bases:

>100_bases
GAGGAATCACTCATGATCAGAAAAAGACGAAAGATCACAAGGATGAGGGGCTCACGCACCGTCGGTGGAGGATGCTCCAA
GAAGAGGAGGGGAGCAGGTC

Product: 50S ribosomal protein L30P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MFAVVRVRGSAGVRRDIADTMEMLRLNRINHAVLVEDTPSYLGMLQKAKDYITWGEVDQETLTAMIRKRGRLIGGDRITD
EYINEKTAYGSVDEFAAAVFSGEVKLEEAGIKPVFRLHPPRKGYEGIKKAFNEGGSLGYRGEKINDLLKRMI

Sequences:

>Translated_152_residues
MFAVVRVRGSAGVRRDIADTMEMLRLNRINHAVLVEDTPSYLGMLQKAKDYITWGEVDQETLTAMIRKRGRLIGGDRITD
EYINEKTAYGSVDEFAAAVFSGEVKLEEAGIKPVFRLHPPRKGYEGIKKAFNEGGSLGYRGEKINDLLKRMI
>Mature_152_residues
MFAVVRVRGSAGVRRDIADTMEMLRLNRINHAVLVEDTPSYLGMLQKAKDYITWGEVDQETLTAMIRKRGRLIGGDRITD
EYINEKTAYGSVDEFAAAVFSGEVKLEEAGIKPVFRLHPPRKGYEGIKKAFNEGGSLGYRGEKINDLLKRMI

Specific function: Unknown

COG id: COG1841

COG function: function code J; Ribosomal protein L30/L7E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L30P family

Homologues:

Organism=Drosophila melanogaster, GI24583248, Length=160, Percent_Identity=28.125, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL30_METTH (O26132)

Other databases:

- EMBL:   AE000666
- PIR:   H69129
- RefSeq:   NP_275169.1
- ProteinModelPortal:   O26132
- SMR:   O26132
- STRING:   O26132
- GeneID:   1469986
- GenomeReviews:   AE000666_GR
- KEGG:   mth:MTH24
- NMPDR:   fig|187420.1.peg.24
- eggNOG:   arNOG07717
- HOGENOM:   HBG297538
- OMA:   DYITWGE
- PhylomeDB:   O26132
- ProtClustDB:   PRK06049
- BioCyc:   MTHE187420:MTH24-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_01371_A
- InterPro:   IPR005997
- InterPro:   IPR023106
- InterPro:   IPR018038
- InterPro:   IPR016082
- Gene3D:   G3DSA:1.10.15.30
- Gene3D:   G3DSA:3.30.1390.20
- TIGRFAMs:   TIGR01309

Pfam domain/function: PF00327 Ribosomal_L30; SSF55129 Ribosomal_L30

EC number: NA

Molecular weight: Translated: 17109; Mature: 17109

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS00634 RIBOSOMAL_L30

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAVVRVRGSAGVRRDIADTMEMLRLNRINHAVLVEDTPSYLGMLQKAKDYITWGEVDQE
CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCHH
TLTAMIRKRGRLIGGDRITDEYINEKTAYGSVDEFAAAVFSGEVKLEEAGIKPVFRLHPP
HHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCEEEECCCCCCEEEECCC
RKGYEGIKKAFNEGGSLGYRGEKINDLLKRMI
CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHC
>Mature Secondary Structure
MFAVVRVRGSAGVRRDIADTMEMLRLNRINHAVLVEDTPSYLGMLQKAKDYITWGEVDQE
CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCHH
TLTAMIRKRGRLIGGDRITDEYINEKTAYGSVDEFAAAVFSGEVKLEEAGIKPVFRLHPP
HHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCEEEECCCCCCEEEECCC
RKGYEGIKKAFNEGGSLGYRGEKINDLLKRMI
CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463