| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15646205
GI number: 15646205
Start: 1667057
End: 1667680
Strand: Reverse
Name: Not Available
Synonym: HP1589
Alternate gene names: 15646205
Gene position: 1667680-1667057 (Counterclockwise)
Preceding gene: 15646196
Following gene: 15646195
Centisome position: 99.99
GC content: 39.74
Gene sequence:
>624_bases TTGACAAGTTCAACAGAATACCAAAGGTATGGCTATGATTACGCCAAGTACCCAAGAAGGATCGCTGAAGAATTGCAGCG TTATGGGGGCAATAGTTTCATGAATTTTTTTAGAGATGAAGGGGTCTTATACAAAGAGATTTTGTGCGATGCGTGCGATC ATTTAAAAGTTAATTACAACAAAAAGTCTGACACAACTTTGATTGAAGAAAACATGCTCTCTAGCATTTTACAAAAAAGT TTGGAAAAAATGAGCGATGAGGAGATTAGAGAGCTTTGCGATGAATTAGGAGTGAAAAACACTAATAAATTAGGCAAGCA AGCCCTAAGCACAGCTGCTTTAACGCTGTTTAGAATGGGTGGCTTCAAATCCTATCAATTAGCTTTAATTGTTGCAAATG CCGTGATAAAGGCGATTTTTCAAAGAGGGTTGTCTCTAGGGGCAAATGCCGCTCTTACAAGAGGGCTAAGCATTTTAACA GGCCCTATTGGCTGGATCATTACAGGCGTATGGACAGCGATTGATATTGCAGGGCCGGCTTATAGGGTAACCATACCGGC ATGCATTTTGGTTGCCACTTTACGCCTAAAGGCACAAGCAAACGAAATTAAAAATATTCTTTAA
Upstream 100 bases:
>100_bases TGACTTGGAATTTTTAAAGCGATTAAGCTCTAGCGATTTGAAAGATTTGTTTGATGCGCTTGTTTATGATGAAGATGGCA CACTAAGAATGAATGAATAA
Downstream 100 bases:
>100_bases CTCTTTTTAAACCTTTTTTAAAAATACAATATAAACCCAGATGCTATAAAATGTCTGGGTTTTATTTTTAGCGTTTGAGA GAATTGATGCTTTAAAGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MTSSTEYQRYGYDYAKYPRRIAEELQRYGGNSFMNFFRDEGVLYKEILCDACDHLKVNYNKKSDTTLIEENMLSSILQKS LEKMSDEEIRELCDELGVKNTNKLGKQALSTAALTLFRMGGFKSYQLALIVANAVIKAIFQRGLSLGANAALTRGLSILT GPIGWIITGVWTAIDIAGPAYRVTIPACILVATLRLKAQANEIKNIL
Sequences:
>Translated_207_residues MTSSTEYQRYGYDYAKYPRRIAEELQRYGGNSFMNFFRDEGVLYKEILCDACDHLKVNYNKKSDTTLIEENMLSSILQKS LEKMSDEEIRELCDELGVKNTNKLGKQALSTAALTLFRMGGFKSYQLALIVANAVIKAIFQRGLSLGANAALTRGLSILT GPIGWIITGVWTAIDIAGPAYRVTIPACILVATLRLKAQANEIKNIL >Mature_206_residues TSSTEYQRYGYDYAKYPRRIAEELQRYGGNSFMNFFRDEGVLYKEILCDACDHLKVNYNKKSDTTLIEENMLSSILQKSL EKMSDEEIRELCDELGVKNTNKLGKQALSTAALTLFRMGGFKSYQLALIVANAVIKAIFQRGLSLGANAALTRGLSILTG PIGWIITGVWTAIDIAGPAYRVTIPACILVATLRLKAQANEIKNIL
Specific function: Unknown
COG id: COG4735
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0174 family [H]
Homologues:
Organism=Escherichia coli, GI1786193, Length=183, Percent_Identity=28.4153005464481, Blast_Score=69, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021150 [H]
Pfam domain/function: PF03981 Ubiq_cyt_C_chap [H]
EC number: NA
Molecular weight: Translated: 23059; Mature: 22928
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSTEYQRYGYDYAKYPRRIAEELQRYGGNSFMNFFRDEGVLYKEILCDACDHLKVNYN CCCCCCHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCEECCC KKSDTTLIEENMLSSILQKSLEKMSDEEIRELCDELGVKNTNKLGKQALSTAALTLFRMG CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC GFKSYQLALIVANAVIKAIFQRGLSLGANAALTRGLSILTGPIGWIITGVWTAIDIAGPA CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC YRVTIPACILVATLRLKAQANEIKNIL HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TSSTEYQRYGYDYAKYPRRIAEELQRYGGNSFMNFFRDEGVLYKEILCDACDHLKVNYN CCCCCHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCEECCC KKSDTTLIEENMLSSILQKSLEKMSDEEIRELCDELGVKNTNKLGKQALSTAALTLFRMG CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC GFKSYQLALIVANAVIKAIFQRGLSLGANAALTRGLSILTGPIGWIITGVWTAIDIAGPA CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC YRVTIPACILVATLRLKAQANEIKNIL HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9252185 [H]