| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15646169
GI number: 15646169
Start: 1643982
End: 1644983
Strand: Reverse
Name: Not Available
Synonym: HP1562
Alternate gene names: NA
Gene position: 1644983-1643982 (Counterclockwise)
Preceding gene: 15646172
Following gene: 15646168
Centisome position: 98.63
GC content: 39.52
Gene sequence:
>1002_bases ATGTTAGTTACTCGCTTTAAAAAAGCTTTAATCTCTTATTCTTTAGGCGCGCTTCTTGTTTCATCGTTATTGGGCGTGGC TAGTGCTTCCAATCAAGAAATCCAAGTCAAAGATTATTTTGGGGATCAAGCCATCAAGCTTCCTGTTTCTAAAATAATCT ACTTGGGTAGCTTTGCAGAAGTGCCTGCTATGTTCCATACTTGGGATAGGGTCGTGGGAATTTCGGATTACGCTTTTAAA TCTGATATTGTTAAAGCTACTCTCAAAGATCCTAAACGCATTAAATCCATGAGCAGTGATCATGTGGCGGCGTTGAATGT GGAGCTTTTAAAAAAGCTTGGCCCCGATCTTGTGGTAACCTTTGTGGGCAACCCTAAAGCGGTAGAGCATGCGAAAAAAT TTGGTATATTATTTCTTTCTTTCCAAGAAAAAACCATTGCAGAAGTCATGGAAGATATTGACGCTCAAGCTAAAGCCTTA GAAATTGATGCTTCTAAAAAACTGGCCAAAATGCAAGAAACTTTGGATTTTATTGCTGAGCGTTTGAAAGGTGTCAAAAA GAAAAAAGGGGTGGAGCTTTTCCATAAGGCCAATAAGATCAGCGGCCATCAAGCCCTTGATTCAGACATTTTAGAAAAAG GAGGCATAGACAATTTTGGCTTGAAATATGTCAAATTTGGGCGTGCTGACATTAGCGTGGAAAAAATCGTTAAAGAAAAC CCTGAGATTATCTTTATTTGGTGGATAAGCCCACTCACGCCTGAAGATGTGTTAAACAACCCCAAATTTGCTACCATCAA AGCCATTAAAAACAAGCAGGTTTATAAACTCCCCACAATGGATATTGGCGGGCCTAGAGCCCCACTCATAAGTCTTTTTA TCGCTCTAAAAGCCCACCCTGAAGCCTTTAAGGGCGTGGATATTAATGCGATTGTTAAAGACTACTATAAAGTGGTTTTT GATTTGAATGATGCAGAGGTTGAACCCTTTTTATGGCATTAA
Upstream 100 bases:
>100_bases TTAATATTTTAGGATTTTGTGAAAAATAGTTTCATTTTTACTGCTTGTATTTCCTTAATGGTGTTATAATCGCTCCATAA ATCATACAAAAAGGATCGTT
Downstream 100 bases:
>100_bases TTTTTAAAAAAGGGCTGATATTTTTAGCCCTTTGTGTATCGCGCTAGGATTAGAACAAGCCTTGTAGCTAAAATTTTCTT CCCTAATTTTCTATCTTACC
Product: iron(III) ABC transporter periplasmic iron-binding protein (ceuE)
Products: NA
Alternate protein names: ABC Transporter
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MLVTRFKKALISYSLGALLVSSLLGVASASNQEIQVKDYFGDQAIKLPVSKIIYLGSFAEVPAMFHTWDRVVGISDYAFK SDIVKATLKDPKRIKSMSSDHVAALNVELLKKLGPDLVVTFVGNPKAVEHAKKFGILFLSFQEKTIAEVMEDIDAQAKAL EIDASKKLAKMQETLDFIAERLKGVKKKKGVELFHKANKISGHQALDSDILEKGGIDNFGLKYVKFGRADISVEKIVKEN PEIIFIWWISPLTPEDVLNNPKFATIKAIKNKQVYKLPTMDIGGPRAPLISLFIALKAHPEAFKGVDINAIVKDYYKVVF DLNDAEVEPFLWH
Sequences:
>Translated_333_residues MLVTRFKKALISYSLGALLVSSLLGVASASNQEIQVKDYFGDQAIKLPVSKIIYLGSFAEVPAMFHTWDRVVGISDYAFK SDIVKATLKDPKRIKSMSSDHVAALNVELLKKLGPDLVVTFVGNPKAVEHAKKFGILFLSFQEKTIAEVMEDIDAQAKAL EIDASKKLAKMQETLDFIAERLKGVKKKKGVELFHKANKISGHQALDSDILEKGGIDNFGLKYVKFGRADISVEKIVKEN PEIIFIWWISPLTPEDVLNNPKFATIKAIKNKQVYKLPTMDIGGPRAPLISLFIALKAHPEAFKGVDINAIVKDYYKVVF DLNDAEVEPFLWH >Mature_333_residues MLVTRFKKALISYSLGALLVSSLLGVASASNQEIQVKDYFGDQAIKLPVSKIIYLGSFAEVPAMFHTWDRVVGISDYAFK SDIVKATLKDPKRIKSMSSDHVAALNVELLKKLGPDLVVTFVGNPKAVEHAKKFGILFLSFQEKTIAEVMEDIDAQAKAL EIDASKKLAKMQETLDFIAERLKGVKKKKGVELFHKANKISGHQALDSDILEKGGIDNFGLKYVKFGRADISVEKIVKEN PEIIFIWWISPLTPEDVLNNPKFATIKAIKNKQVYKLPTMDIGGPRAPLISLFIALKAHPEAFKGVDINAIVKDYYKVVF DLNDAEVEPFLWH
Specific function: Unknown
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37103; Mature: 37103
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVTRFKKALISYSLGALLVSSLLGVASASNQEIQVKDYFGDQAIKLPVSKIIYLGSFAE CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCHHHHHHHCCHHH VPAMFHTWDRVVGISDYAFKSDIVKATLKDPKRIKSMSSDHVAALNVELLKKLGPDLVVT HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCEEEHHHHHHHHCCCCEEEE FVGNPKAVEHAKKFGILFLSFQEKTIAEVMEDIDAQAKALEIDASKKLAKMQETLDFIAE ECCCCHHHHHHHHHCEEEEEECHHHHHHHHHHHCCHHHEEECCHHHHHHHHHHHHHHHHH RLKGVKKKKGVELFHKANKISGHQALDSDILEKGGIDNFGLKYVKFGRADISVEKIVKEN HHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHCC PEIIFIWWISPLTPEDVLNNPKFATIKAIKNKQVYKLPTMDIGGPRAPLISLFIALKAHP CCEEEEEEECCCCHHHHHCCCCEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHCCC EAFKGVDINAIVKDYYKVVFDLNDAEVEPFLWH HHHCCCCHHHHHHHHHHHHEECCCCCCCCCCCC >Mature Secondary Structure MLVTRFKKALISYSLGALLVSSLLGVASASNQEIQVKDYFGDQAIKLPVSKIIYLGSFAE CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCHHHHHHHCCHHH VPAMFHTWDRVVGISDYAFKSDIVKATLKDPKRIKSMSSDHVAALNVELLKKLGPDLVVT HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCEEEHHHHHHHHCCCCEEEE FVGNPKAVEHAKKFGILFLSFQEKTIAEVMEDIDAQAKALEIDASKKLAKMQETLDFIAE ECCCCHHHHHHHHHCEEEEEECHHHHHHHHHHHCCHHHEEECCHHHHHHHHHHHHHHHHH RLKGVKKKKGVELFHKANKISGHQALDSDILEKGGIDNFGLKYVKFGRADISVEKIVKEN HHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHCC PEIIFIWWISPLTPEDVLNNPKFATIKAIKNKQVYKLPTMDIGGPRAPLISLFIALKAHP CCEEEEEEECCCCHHHHHCCCCEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHCCC EAFKGVDINAIVKDYYKVVFDLNDAEVEPFLWH HHHCCCCHHHHHHHHHHHHEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA