| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15646168
GI number: 15646168
Start: 1642774
End: 1643781
Strand: Reverse
Name: Not Available
Synonym: HP1561
Alternate gene names: NA
Gene position: 1643781-1642774 (Counterclockwise)
Preceding gene: 15646169
Following gene: 15646166
Centisome position: 98.56
GC content: 40.87
Gene sequence:
>1008_bases ATGTTAGTTACTCGCTTTAAAAAAGCTTTCATTTCTTATTCTTTAGGCGTGCTTGTCGCTTCATTATGGTTGAACGTGTG CAACGCTTCAGCGCAAGAAGTCAAAGTCAAGGATTATTTCGGGGAGCAAACCATCAAGCTTCCTGTTTCTAAAATAGCCT ATATAGGGAGCTATGTAGAAGTGCCTGCCATGCTTAATGTTTGGAATAGGGTTGTAGGCGTTTCGGATTACGCTTTTAAA GACGATATTGTCAAAGCCACTCTCAAAGGCGAAGATCTTAAACGCGTCAAACACATGAGCACTGATCATACAGCCGCGCT AAATGTAGAGCTTTTAAAAAAGCTTAGCCCTGATCTTGTGGTAACCTTTGTGGGCAACCCTAAAGCGGTAGAGCATGCGA AAAAATTTGGTATATCATTTCTTTCTTTTCAAGAGACAACGATTGCAGAGGCCATGCAGGCCATGCAAGCTCAAGCCACG GTTTTAGAGATTGACGCTTCCAAAAAATTCGCCAAAATGCAAGAAACTTTGGATTTTATTGCTGAGCGTTTGAAAAATGT CAAAAAGAAAAAGGGGGTGGAGCTTTTCCATAAAGCCAATAAAATCAGCGGCCATCAAGCCATTAGCTCAGACATTTTAG AAAAAGGGGGCATAGACAATTTTGGCTTGAAATATGTCAAATTTGGGCGTGCTGACATTAGCGTGGAAAAAATCGTTAAA GAAAACCCTGAGATTATCTTTATTTGGTGGATAAGCCCACTCACGCCTGAAGATGTGTTAAACAACCCCAAATTTGCTAC CATCAAAGCCATTAAAAACAAGCAGGTTTATAAACTCCCCACAATGGATATTGGCGGGCCTAGAGCCCCACTCATAAGTC TTTTTATCGCTCTAAAAGCCCACCCTGAAGCCTTTAAGGGCGTGGATATTAATGCGATGGTTAAAGACTACTATAAAGTG GTTTTTGATTTGAATGATGCAGAGGTTGAGCCCTTTTTATGGCATTAA
Upstream 100 bases:
>100_bases TTTATCTTTTAAGATTTTATGAAAAATAGTTTCATTTTTACTATTGTTATTTTCTTAGTAATGTTATAATCGCTTTATAA ATCATACAAAAAGGATCGCT
Downstream 100 bases:
>100_bases TTTTTAAAAAGGGGTTGATGTTTTTAGCCTTTCGTGTATCGCGCTAGGMTTAGAACAAGCCCTATAGCGATACAATTCGC TAGAAGCGAACTCCCTCCAT
Product: iron(III) ABC transporter periplasmic iron-binding protein (ceuE)
Products: NA
Alternate protein names: ABC Transporter
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MLVTRFKKAFISYSLGVLVASLWLNVCNASAQEVKVKDYFGEQTIKLPVSKIAYIGSYVEVPAMLNVWNRVVGVSDYAFK DDIVKATLKGEDLKRVKHMSTDHTAALNVELLKKLSPDLVVTFVGNPKAVEHAKKFGISFLSFQETTIAEAMQAMQAQAT VLEIDASKKFAKMQETLDFIAERLKNVKKKKGVELFHKANKISGHQAISSDILEKGGIDNFGLKYVKFGRADISVEKIVK ENPEIIFIWWISPLTPEDVLNNPKFATIKAIKNKQVYKLPTMDIGGPRAPLISLFIALKAHPEAFKGVDINAMVKDYYKV VFDLNDAEVEPFLWH
Sequences:
>Translated_335_residues MLVTRFKKAFISYSLGVLVASLWLNVCNASAQEVKVKDYFGEQTIKLPVSKIAYIGSYVEVPAMLNVWNRVVGVSDYAFK DDIVKATLKGEDLKRVKHMSTDHTAALNVELLKKLSPDLVVTFVGNPKAVEHAKKFGISFLSFQETTIAEAMQAMQAQAT VLEIDASKKFAKMQETLDFIAERLKNVKKKKGVELFHKANKISGHQAISSDILEKGGIDNFGLKYVKFGRADISVEKIVK ENPEIIFIWWISPLTPEDVLNNPKFATIKAIKNKQVYKLPTMDIGGPRAPLISLFIALKAHPEAFKGVDINAMVKDYYKV VFDLNDAEVEPFLWH >Mature_335_residues MLVTRFKKAFISYSLGVLVASLWLNVCNASAQEVKVKDYFGEQTIKLPVSKIAYIGSYVEVPAMLNVWNRVVGVSDYAFK DDIVKATLKGEDLKRVKHMSTDHTAALNVELLKKLSPDLVVTFVGNPKAVEHAKKFGISFLSFQETTIAEAMQAMQAQAT VLEIDASKKFAKMQETLDFIAERLKNVKKKKGVELFHKANKISGHQAISSDILEKGGIDNFGLKYVKFGRADISVEKIVK ENPEIIFIWWISPLTPEDVLNNPKFATIKAIKNKQVYKLPTMDIGGPRAPLISLFIALKAHPEAFKGVDINAMVKDYYKV VFDLNDAEVEPFLWH
Specific function: Unknown
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37552; Mature: 37552
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVTRFKKAFISYSLGVLVASLWLNVCNASAQEVKVKDYFGEQTIKLPVSKIAYIGSYVE CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEHHHHHCCCEEECHHHHHHHHHHHHH VPAMLNVWNRVVGVSDYAFKDDIVKATLKGEDLKRVKHMSTDHTAALNVELLKKLSPDLV HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCEE VTFVGNPKAVEHAKKFGISFLSFQETTIAEAMQAMQAQATVLEIDASKKFAKMQETLDFI EEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHH AERLKNVKKKKGVELFHKANKISGHQAISSDILEKGGIDNFGLKYVKFGRADISVEKIVK HHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHH ENPEIIFIWWISPLTPEDVLNNPKFATIKAIKNKQVYKLPTMDIGGPRAPLISLFIALKA CCCCEEEEEEECCCCHHHHHCCCCEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHC HPEAFKGVDINAMVKDYYKVVFDLNDAEVEPFLWH CCHHHCCCCHHHHHHHHHHHHEECCCCCCCCCCCC >Mature Secondary Structure MLVTRFKKAFISYSLGVLVASLWLNVCNASAQEVKVKDYFGEQTIKLPVSKIAYIGSYVE CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEHHHHHCCCEEECHHHHHHHHHHHHH VPAMLNVWNRVVGVSDYAFKDDIVKATLKGEDLKRVKHMSTDHTAALNVELLKKLSPDLV HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCEE VTFVGNPKAVEHAKKFGISFLSFQETTIAEAMQAMQAQATVLEIDASKKFAKMQETLDFI EEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHH AERLKNVKKKKGVELFHKANKISGHQAISSDILEKGGIDNFGLKYVKFGRADISVEKIVK HHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHH ENPEIIFIWWISPLTPEDVLNNPKFATIKAIKNKQVYKLPTMDIGGPRAPLISLFIALKA CCCCEEEEEEECCCCHHHHHCCCCEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHC HPEAFKGVDINAMVKDYYKVVFDLNDAEVEPFLWH CCHHHCCCCHHHHHHHHHHHHEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA