| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15646150
GI number: 15646150
Start: 1621941
End: 1622879
Strand: Reverse
Name: Not Available
Synonym: HP1543
Alternate gene names: 15646150
Gene position: 1622879-1621941 (Counterclockwise)
Preceding gene: 15646151
Following gene: 15646149
Centisome position: 97.3
GC content: 40.89
Gene sequence:
>939_bases GTGTTTTTAGACAGGCGTTTGATTGTGATGGTTACGGACTCTAAAGGGAGTCGTTATATTAATGTTCATATCTTATTCCG TCAAATTGGCCTGTATGCGCTTTTGAGCGTTGTGGGATCTTTATTGTTTTTAGGCATTTCACTATTGGTTTTAAATCAAG AGATTAAAAACATTGACAAGCAGCATGCTCTAATCACTAAAGAATTTGAGAAAAAAAAAGAGACGAATGAAAAGCTTTCC TTGCAAATGGATGAATTTTTAGACGATTTGCAGCTTTCAGGGGAACGCATCAACGATTTAGAAGAAGTGGTGGGAGTGAA TAGGCCTGAAGAAGAAAAAGAAGAGGGCAATTTTTCCAGTCGTTTGGATGTCGCTGGGATTACCGGGCTTCAAAAAAGCT TTATCATGCGCCTTATCCCTAATGACTACCCGCTAGAATCCTATCGGCGCGTTTCAGCCGCCTTTAATAAAAGAATCCAC CCTATTTTGCATGTGCTGCACAACCATACCGGGCTTGATTTAAGCACCGCTATTAACACCCCTGTGTATGCGAGCGCGAG CGGGGTAGTAGGGTTAGCGAGCAAGGGGTGGAATGGGGGGTATGGGAATTTGATTAAAGTTTTCCACCCTTTTGGTTTTA AAACCTACTACGCCCATTTGAATAAAATCGTCGTAAAAACGGGCGAATTTGTCAAAAAAGGGCAGTTGATTGGGTATAGT GGTAATACAGGGATGAGCACAGGGCCGCATTTGCATTATGAAGTGCGTTTTTTAGATCAACCCATAAACCCCATGAGTTT CACCAAATGGAACATGAAAGATTTTGAAGAAGTTTTCAATAAAGAAAGGAGCATCAGATGGCAATCTTTGATAACAATAA TAAATCGGCTAATGCAAAAACAGGACCAGCGACTATCATCGCTCAAGGCACAAAAATAA
Upstream 100 bases:
>100_bases AATTTATTGAATGGAAGAATTTGTTTTGGGTTTTAGAAGACATTGTCCAGCTCCAAGAGCATGTGGATAAAGACGCACTC ATAAGCCAGTAAGGATTTTA
Downstream 100 bases:
>100_bases AGGGGGAGCTTCATTTAGATTACCATTTGCACGTAGATGGCGAATTAGAAGGGGTGGTGCATTCTAAAAGCACGGTGGTG ATCGGGCAAACCGGCTCGGT
Product: toxR-activated gene (tagE)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MFLDRRLIVMVTDSKGSRYINVHILFRQIGLYALLSVVGSLLFLGISLLVLNQEIKNIDKQHALITKEFEKKKETNEKLS LQMDEFLDDLQLSGERINDLEEVVGVNRPEEEKEEGNFSSRLDVAGITGLQKSFIMRLIPNDYPLESYRRVSAAFNKRIH PILHVLHNHTGLDLSTAINTPVYASASGVVGLASKGWNGGYGNLIKVFHPFGFKTYYAHLNKIVVKTGEFVKKGQLIGYS GNTGMSTGPHLHYEVRFLDQPINPMSFTKWNMKDFEEVFNKERSIRWQSLITIINRLMQKQDQRLSSLKAQK
Sequences:
>Translated_312_residues MFLDRRLIVMVTDSKGSRYINVHILFRQIGLYALLSVVGSLLFLGISLLVLNQEIKNIDKQHALITKEFEKKKETNEKLS LQMDEFLDDLQLSGERINDLEEVVGVNRPEEEKEEGNFSSRLDVAGITGLQKSFIMRLIPNDYPLESYRRVSAAFNKRIH PILHVLHNHTGLDLSTAINTPVYASASGVVGLASKGWNGGYGNLIKVFHPFGFKTYYAHLNKIVVKTGEFVKKGQLIGYS GNTGMSTGPHLHYEVRFLDQPINPMSFTKWNMKDFEEVFNKERSIRWQSLITIINRLMQKQDQRLSSLKAQK >Mature_312_residues MFLDRRLIVMVTDSKGSRYINVHILFRQIGLYALLSVVGSLLFLGISLLVLNQEIKNIDKQHALITKEFEKKKETNEKLS LQMDEFLDDLQLSGERINDLEEVVGVNRPEEEKEEGNFSSRLDVAGITGLQKSFIMRLIPNDYPLESYRRVSAAFNKRIH PILHVLHNHTGLDLSTAINTPVYASASGVVGLASKGWNGGYGNLIKVFHPFGFKTYYAHLNKIVVKTGEFVKKGQLIGYS GNTGMSTGPHLHYEVRFLDQPINPMSFTKWNMKDFEEVFNKERSIRWQSLITIINRLMQKQDQRLSSLKAQK
Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]
COG id: COG0739
COG function: function code M; Membrane proteins related to metalloendopeptidases
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M23B family [H]
Homologues:
Organism=Escherichia coli, GI87081989, Length=239, Percent_Identity=33.4728033472803, Blast_Score=104, Evalue=8e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011055 - InterPro: IPR007340 - InterPro: IPR016047 - InterPro: IPR002886 [H]
Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]
EC number: 3.4.24.- [C]
Molecular weight: Translated: 35629; Mature: 35629
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLDRRLIVMVTDSKGSRYINVHILFRQIGLYALLSVVGSLLFLGISLLVLNQEIKNIDK CCCCCEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH QHALITKEFEKKKETNEKLSLQMDEFLDDLQLSGERINDLEEVVGVNRPEEEKEEGNFSS HHHHHHHHHHHHHHCCHHHHEEHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHCCCCCC RLDVAGITGLQKSFIMRLIPNDYPLESYRRVSAAFNKRIHPILHVLHNHTGLDLSTAINT CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC PVYASASGVVGLASKGWNGGYGNLIKVFHPFGFKTYYAHLNKIVVKTGEFVKKGQLIGYS CCEECCCCCEEECCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCHHHHCCEEEEEC GNTGMSTGPHLHYEVRFLDQPINPMSFTKWNMKDFEEVFNKERSIRWQSLITIINRLMQK CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QDQRLSSLKAQK HHHHHHHHCCCC >Mature Secondary Structure MFLDRRLIVMVTDSKGSRYINVHILFRQIGLYALLSVVGSLLFLGISLLVLNQEIKNIDK CCCCCEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH QHALITKEFEKKKETNEKLSLQMDEFLDDLQLSGERINDLEEVVGVNRPEEEKEEGNFSS HHHHHHHHHHHHHHCCHHHHEEHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHCCCCCC RLDVAGITGLQKSFIMRLIPNDYPLESYRRVSAAFNKRIHPILHVLHNHTGLDLSTAINT CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC PVYASASGVVGLASKGWNGGYGNLIKVFHPFGFKTYYAHLNKIVVKTGEFVKKGQLIGYS CCEECCCCCEEECCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCHHHHCCEEEEEC GNTGMSTGPHLHYEVRFLDQPINPMSFTKWNMKDFEEVFNKERSIRWQSLITIINRLMQK CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QDQRLSSLKAQK HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]