| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15646129
GI number: 15646129
Start: 1595770
End: 1597062
Strand: Reverse
Name: Not Available
Synonym: HP1520
Alternate gene names: NA
Gene position: 1597062-1595770 (Counterclockwise)
Preceding gene: 15646130
Following gene: 15646128
Centisome position: 95.75
GC content: 26.45
Gene sequence:
>1293_bases ATGGGGTTAAAAATTATCAATATAGAGAATTGTTATGGGATAGGAAAGATACAAAAAACATCTTTAGATTTTTCAAAATC AAATAGCTATCTTTTATATGCTCAAAATGGGGTTTTTAAAACTTCATTTGCAAAAAGCCTGACCGATTTGATAAATAACG AAATGCCAAAAGATAATTTTTATCCTAATCGTAAAAGTAAAATAGAGATTGAATTTAATGGTGAGAAAATATTAAAAGAA AATGTTGCTGTTTTTCATTCTTATGATGAAGAATTTAGCTCTGAAGACAGCGTTACAACTTTTATGGCAAAATCAGACCT CAAACAACAATATGATAATATTCTTTTAGAATTAGAAAAAGAAAAGAAGGCACTTTTAAAAAGTCTTAGAGATATTGCAA GCGGTTTTGATTATGAAGAAGAAATAAAAACCATTAAAAATGAAAAAAATAAAAGTTTTTATGAAATTTTAGATAATCAT TTGACGGAAATAGAAAGCAGCGAAAAACACTATTCTTTTAAATATCGTGATATATTTGATGGATCAAAAAAAGTAAAAGA TTTTGTCAATAAGCATCATGATTTGATTGAGCAGTATTTTAATAAATATCAAGAATTATTGTCTCAATCTAAGATTTTTA AACATATGAATAGTGGGGATTTTGGAACAAACCATGCTGATGATCTTAAAAAAGCTTTAGAAAATAACAGGTTTTTTAAA GCTAACCATAGTTTGAAAATTGCTGGAGAGGAAATTACGAATTATCAAAAATTGTCAGATATTTTTGAAAATGAAAAAAA TAGAATTTTAAATAATGAGGAGCTTAAAGAGAGCTTTGATAAGATTGAAAAAGTCATAAATGCTAATAAGGAACTTAAAG CCTTTAAAGATGCTATCAGTAAGGATAATACATTATTGACAGAATTTTTAGATTATGATTCTTTTAGAAAAAAGGTGTTG TTTAGCTATCTTAAACAAGTTATTCAAAATGTTAAGAGTTTGGTTAATCTTTATAGAGAGAAAAAGCCTGAAATAGAAGA AATTATAAAACAAGCTAGCAAAGACCAGAAAGAATGGGAATCTGTCATTGAAATTTTTAATCAAAGATTTCTTGTTCCCT TTAAAGTGGAGCTTCAAAATCAAAAAGATATTTTATTGAATAAAGACGCCGCACAATTTAGATTTATATTTTCTGATGAC AATCAGGATATGAATGTTCAAAAAGAAGATTTGCAAAAACATTTAAGCGGAGGAGAAAAAGAAAGCGTTATATATCTTAC AAATCTTGTTTGA
Upstream 100 bases:
>100_bases TGGAACAATTTCAATTTGAATCAATTTAAACTTAATCTTTAAAAAGGTCTTATTGAAATGAATACGATAAGGTTTGATTA AATTTACTAAGGAGTAGTCA
Downstream 100 bases:
>100_bases AATTGAGGCTAGAAAAAGAAGCGACGAAGTCCAACTCTTAGTTTTTGATGATATTTCAGACTCTTTTGATTATAGAAATA AGTATGCAATTATTGAGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Macrophage Infection Protein MimD
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MGLKIINIENCYGIGKIQKTSLDFSKSNSYLLYAQNGVFKTSFAKSLTDLINNEMPKDNFYPNRKSKIEIEFNGEKILKE NVAVFHSYDEEFSSEDSVTTFMAKSDLKQQYDNILLELEKEKKALLKSLRDIASGFDYEEEIKTIKNEKNKSFYEILDNH LTEIESSEKHYSFKYRDIFDGSKKVKDFVNKHHDLIEQYFNKYQELLSQSKIFKHMNSGDFGTNHADDLKKALENNRFFK ANHSLKIAGEEITNYQKLSDIFENEKNRILNNEELKESFDKIEKVINANKELKAFKDAISKDNTLLTEFLDYDSFRKKVL FSYLKQVIQNVKSLVNLYREKKPEIEEIIKQASKDQKEWESVIEIFNQRFLVPFKVELQNQKDILLNKDAAQFRFIFSDD NQDMNVQKEDLQKHLSGGEKESVIYLTNLV
Sequences:
>Translated_430_residues MGLKIINIENCYGIGKIQKTSLDFSKSNSYLLYAQNGVFKTSFAKSLTDLINNEMPKDNFYPNRKSKIEIEFNGEKILKE NVAVFHSYDEEFSSEDSVTTFMAKSDLKQQYDNILLELEKEKKALLKSLRDIASGFDYEEEIKTIKNEKNKSFYEILDNH LTEIESSEKHYSFKYRDIFDGSKKVKDFVNKHHDLIEQYFNKYQELLSQSKIFKHMNSGDFGTNHADDLKKALENNRFFK ANHSLKIAGEEITNYQKLSDIFENEKNRILNNEELKESFDKIEKVINANKELKAFKDAISKDNTLLTEFLDYDSFRKKVL FSYLKQVIQNVKSLVNLYREKKPEIEEIIKQASKDQKEWESVIEIFNQRFLVPFKVELQNQKDILLNKDAAQFRFIFSDD NQDMNVQKEDLQKHLSGGEKESVIYLTNLV >Mature_429_residues GLKIINIENCYGIGKIQKTSLDFSKSNSYLLYAQNGVFKTSFAKSLTDLINNEMPKDNFYPNRKSKIEIEFNGEKILKEN VAVFHSYDEEFSSEDSVTTFMAKSDLKQQYDNILLELEKEKKALLKSLRDIASGFDYEEEIKTIKNEKNKSFYEILDNHL TEIESSEKHYSFKYRDIFDGSKKVKDFVNKHHDLIEQYFNKYQELLSQSKIFKHMNSGDFGTNHADDLKKALENNRFFKA NHSLKIAGEEITNYQKLSDIFENEKNRILNNEELKESFDKIEKVINANKELKAFKDAISKDNTLLTEFLDYDSFRKKVLF SYLKQVIQNVKSLVNLYREKKPEIEEIIKQASKDQKEWESVIEIFNQRFLVPFKVELQNQKDILLNKDAAQFRFIFSDDN QDMNVQKEDLQKHLSGGEKESVIYLTNLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50574; Mature: 50442
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLKIINIENCYGIGKIQKTSLDFSKSNSYLLYAQNGVFKTSFAKSLTDLINNEMPKDNF CCEEEEEECCCCCCCCEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCC YPNRKSKIEIEFNGEKILKENVAVFHSYDEEFSSEDSVTTFMAKSDLKQQYDNILLELEK CCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH EKKALLKSLRDIASGFDYEEEIKTIKNEKNKSFYEILDNHLTEIESSEKHYSFKYRDIFD HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEHHHHHC GSKKVKDFVNKHHDLIEQYFNKYQELLSQSKIFKHMNSGDFGTNHADDLKKALENNRFFK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEE ANHSLKIAGEEITNYQKLSDIFENEKNRILNNEELKESFDKIEKVINANKELKAFKDAIS ECCCEEECCHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHC KDNTLLTEFLDYDSFRKKVLFSYLKQVIQNVKSLVNLYREKKPEIEEIIKQASKDQKEWE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHH SVIEIFNQRFLVPFKVELQNQKDILLNKDAAQFRFIFSDDNQDMNVQKEDLQKHLSGGEK HHHHHHHCCCCCEEEEEECCCCCCEECCCCHHEEEEECCCCCCCCCCHHHHHHHHCCCCC ESVIYLTNLV CCEEEEEECC >Mature Secondary Structure GLKIINIENCYGIGKIQKTSLDFSKSNSYLLYAQNGVFKTSFAKSLTDLINNEMPKDNF CEEEEEECCCCCCCCEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCC YPNRKSKIEIEFNGEKILKENVAVFHSYDEEFSSEDSVTTFMAKSDLKQQYDNILLELEK CCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH EKKALLKSLRDIASGFDYEEEIKTIKNEKNKSFYEILDNHLTEIESSEKHYSFKYRDIFD HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEHHHHHC GSKKVKDFVNKHHDLIEQYFNKYQELLSQSKIFKHMNSGDFGTNHADDLKKALENNRFFK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEE ANHSLKIAGEEITNYQKLSDIFENEKNRILNNEELKESFDKIEKVINANKELKAFKDAIS ECCCEEECCHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHC KDNTLLTEFLDYDSFRKKVLFSYLKQVIQNVKSLVNLYREKKPEIEEIIKQASKDQKEWE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHH SVIEIFNQRFLVPFKVELQNQKDILLNKDAAQFRFIFSDDNQDMNVQKEDLQKHLSGGEK HHHHHHHCCCCCEEEEEECCCCCCEECCCCHHEEEEECCCCCCCCCCHHHHHHHHCCCCC ESVIYLTNLV CCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA