| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15646115
GI number: 15646115
Start: 1578968
End: 1580194
Strand: Reverse
Name: Not Available
Synonym: HP1506
Alternate gene names: 15646115
Gene position: 1580194-1578968 (Counterclockwise)
Preceding gene: 15646117
Following gene: 15646114
Centisome position: 94.74
GC content: 43.68
Gene sequence:
>1227_bases TTGCAAGAAATTAAGTTGGATATTTATGCCACTTTGGTGTGCATGGTTTTAGTGCTGCTTTTGGGGCGTTATGTGATTTC TAAAGTCAAGTTTTTGCGCGATTATGATATTCCAGAGCCTGTTGTGGGCGGGGTTTTAGTCGCTTTTGCTATCATGTTAG CGCGTCAGTTTTACAATTTTGGCTTGCAATTTGATTCTTCTTTAAAAGATCCTTTAATGCTGACTTTTTTTATCACCATT GGTTTGAGCGCGGATTTCAAATCTTTACAAAAAGGCGGGAAAATGCTTGCGGTTTTTTTGCTGGCTGTGGCGGGGTTTGT GGTGTGTCAAAATGCAGTGGGGATTTCTACCGCTAGCCTTTTAGGGGTCAATCCTTTAATGGGGCTTTTAGGGGGGTCTA TCGCTTTAGTGGGAGGGCATGGCACTAGCGCGGCATGGGCTAATTTTTTCACCCAACCACCTTATAATTTTAGCTCCAGC TTAGAAGTGGGCATGGCGTGCGCGACTTTTGGCTTGGTGAGCGGGGGGATTATTGGAGGACCTGTCGCTAAATATTTGAT CTCAAAATACAAACTAGAGCCTAAAGACACTAAAGAAAAAGACACTTTAGAGGGCGTGGTGTCTAAAGGCTTTGAAACCC CTAAAGAGCAACGCCTAATCACCGAATCCAGTTTTGTAGAAACCTTAGCTCTAATTGCAATAGCTTTATTAGTGGGGACT TTTTTATCGCATTTGGTGCCTAAAAGCTTCACCTTGCCGACTTTTGTGTGGTGCTTGTTTGTAGGGGTTATTTTAAGAAA CACCTTGTCGTTTTTTAAAATCCATAGCGTGTTTGACAGAGAGGTTTCAGTCATAGGGAACGTGAGTTTGAGCCTGTTTT TAGCCTACGCTTTGATGAGCGTGAATTTATTGGAATTGTTAAAACTCGCTGTGCCGTTAGCGGTTATTTTGAGCGTTCAA GTGGTATTTATGATCCTTTATGTGGTGCTGGTAACCTTTAGGGTATGCGGGAAGGATTATGATGCGGCGGTGTTGTGCGC GGGGCATTGCGGTTTTGGGCTTGGAGCGACTCCAACGGCTATGGTGAATATGCAAACCATCACCAACCACTACGGGCCAT CGCATGTGGCGTTTATCGTCGTGCCTTTAGTGGGAGCGTTTTTTGTTGATATTATTAACGCTTTAGCGATTAAAGGCTTT TTGCTCTTGCCTTTTTTCCCATCATGA
Upstream 100 bases:
>100_bases TAATACTGTATGCAAGGAACACCTACTTTCTAACTGATCTCGTTCTTTTAGGGGGGTATTATATTATAATAAGATAAATT TGATTAATAAGGATGCAAGT
Downstream 100 bases:
>100_bases GACTTTATGAGAGTTTATTAGAAATGTGCTTGAATAAGGCATGGGAGCATCAAACCCTAGCCTTAGAAAACCCAAGCGTA GCTTGCATGGTGTTGGATAA
Product: glutamate permease (gltS)
Products: Na (I) [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate permease [H]
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MQEIKLDIYATLVCMVLVLLLGRYVISKVKFLRDYDIPEPVVGGVLVAFAIMLARQFYNFGLQFDSSLKDPLMLTFFITI GLSADFKSLQKGGKMLAVFLLAVAGFVVCQNAVGISTASLLGVNPLMGLLGGSIALVGGHGTSAAWANFFTQPPYNFSSS LEVGMACATFGLVSGGIIGGPVAKYLISKYKLEPKDTKEKDTLEGVVSKGFETPKEQRLITESSFVETLALIAIALLVGT FLSHLVPKSFTLPTFVWCLFVGVILRNTLSFFKIHSVFDREVSVIGNVSLSLFLAYALMSVNLLELLKLAVPLAVILSVQ VVFMILYVVLVTFRVCGKDYDAAVLCAGHCGFGLGATPTAMVNMQTITNHYGPSHVAFIVVPLVGAFFVDIINALAIKGF LLLPFFPS
Sequences:
>Translated_408_residues MQEIKLDIYATLVCMVLVLLLGRYVISKVKFLRDYDIPEPVVGGVLVAFAIMLARQFYNFGLQFDSSLKDPLMLTFFITI GLSADFKSLQKGGKMLAVFLLAVAGFVVCQNAVGISTASLLGVNPLMGLLGGSIALVGGHGTSAAWANFFTQPPYNFSSS LEVGMACATFGLVSGGIIGGPVAKYLISKYKLEPKDTKEKDTLEGVVSKGFETPKEQRLITESSFVETLALIAIALLVGT FLSHLVPKSFTLPTFVWCLFVGVILRNTLSFFKIHSVFDREVSVIGNVSLSLFLAYALMSVNLLELLKLAVPLAVILSVQ VVFMILYVVLVTFRVCGKDYDAAVLCAGHCGFGLGATPTAMVNMQTITNHYGPSHVAFIVVPLVGAFFVDIINALAIKGF LLLPFFPS >Mature_408_residues MQEIKLDIYATLVCMVLVLLLGRYVISKVKFLRDYDIPEPVVGGVLVAFAIMLARQFYNFGLQFDSSLKDPLMLTFFITI GLSADFKSLQKGGKMLAVFLLAVAGFVVCQNAVGISTASLLGVNPLMGLLGGSIALVGGHGTSAAWANFFTQPPYNFSSS LEVGMACATFGLVSGGIIGGPVAKYLISKYKLEPKDTKEKDTLEGVVSKGFETPKEQRLITESSFVETLALIAIALLVGT FLSHLVPKSFTLPTFVWCLFVGVILRNTLSFFKIHSVFDREVSVIGNVSLSLFLAYALMSVNLLELLKLAVPLAVILSVQ VVFMILYVVLVTFRVCGKDYDAAVLCAGHCGFGLGATPTAMVNMQTITNHYGPSHVAFIVVPLVGAFFVDIINALAIKGF LLLPFFPS
Specific function: Catalyzes the sodium-dependent uptake of extracellular glutamate [H]
COG id: COG0786
COG function: function code E; Na+/glutamate symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gltS symporter family [H]
Homologues:
Organism=Escherichia coli, GI1790085, Length=386, Percent_Identity=56.4766839378238, Blast_Score=387, Evalue=1e-109,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004445 [H]
Pfam domain/function: PF03616 Glt_symporter [H]
EC number: NA
Molecular weight: Translated: 43958; Mature: 43958
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEIKLDIYATLVCMVLVLLLGRYVISKVKFLRDYDIPEPVVGGVLVAFAIMLARQFYNF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC GLQFDSSLKDPLMLTFFITIGLSADFKSLQKGGKMLAVFLLAVAGFVVCQNAVGISTASL CCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHH LGVNPLMGLLGGSIALVGGHGTSAAWANFFTQPPYNFSSSLEVGMACATFGLVSGGIIGG HHHHHHHHHHCCCEEEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHH PVAKYLISKYKLEPKDTKEKDTLEGVVSKGFETPKEQRLITESSFVETLALIAIALLVGT HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FLSHLVPKSFTLPTFVWCLFVGVILRNTLSFFKIHSVFDREVSVIGNVSLSLFLAYALMS HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNLLELLKLAVPLAVILSVQVVFMILYVVLVTFRVCGKDYDAAVLCAGHCGFGLGATPTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHH MVNMQTITNHYGPSHVAFIVVPLVGAFFVDIINALAIKGFLLLPFFPS HEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MQEIKLDIYATLVCMVLVLLLGRYVISKVKFLRDYDIPEPVVGGVLVAFAIMLARQFYNF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC GLQFDSSLKDPLMLTFFITIGLSADFKSLQKGGKMLAVFLLAVAGFVVCQNAVGISTASL CCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHH LGVNPLMGLLGGSIALVGGHGTSAAWANFFTQPPYNFSSSLEVGMACATFGLVSGGIIGG HHHHHHHHHHCCCEEEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHH PVAKYLISKYKLEPKDTKEKDTLEGVVSKGFETPKEQRLITESSFVETLALIAIALLVGT HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FLSHLVPKSFTLPTFVWCLFVGVILRNTLSFFKIHSVFDREVSVIGNVSLSLFLAYALMS HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNLLELLKLAVPLAVILSVQVVFMILYVVLVTFRVCGKDYDAAVLCAGHCGFGLGATPTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHH MVNMQTITNHYGPSHVAFIVVPLVGAFFVDIINALAIKGFLLLPFFPS HEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Na (I) [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Na (I) [Periplasm] + L-glutamate [Periplasm] = Na (I) [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2254324; 2017136; 7686882; 9278503; 1544582 [H]