| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645976
GI number: 15645976
Start: 1425795
End: 1426988
Strand: Reverse
Name: Not Available
Synonym: HP1364
Alternate gene names: 15645976
Gene position: 1426988-1425795 (Counterclockwise)
Preceding gene: 15645977
Following gene: 15645975
Centisome position: 85.56
GC content: 37.1
Gene sequence:
>1194_bases TTGGCTATCGCTTTAACCCACTATGAAAAAAAATCCCTTAAACTCTTTTTAGGGATTTATTTAGGCTCTTCGTTTGTGTT GATGCTAGTGATTAGCGTTTTAGCGTTTAACTATGAAAAAAACGAAAAAATCAAAATGATACGCATGGACATGGACAAAA TGGCTTCTAAGATCGCTAGCGAAGTGATTGCCTTGCACATGCAAACGCATGGGGATTATCAAAACGCTTTAAACGCTCTC ATTTCACGCTATAAAGACGCTTCCATAGCCCTTTTTGATAGTAAAAAGCGTGTTTTGTATTCTAATATCCCTGAAAGCGC CAATTTGATTAAAAACCATAAAGAAGCGGGCTTTTTTAGTTTTAGGGGAGAGTATTACCTATTGAGCGATGAAACTTTCG CTCACTTAGGCGTGGCTAAAATGCTTTTTAAAAATTCTAAACCCCTTCATTTTTCTTCTTTGTATCGTAACATTGTTTTA GTGTTTGTTGTAGCGTTTTTATGCGTGATAGGGGTTTCTGTGTTTTTGGGGCGTTTGTTTTTAAAGCCCATTAGGAATGA AATCACCCGCATTGATCATTTTTTAAAAAACACCACGCATGAATTAAACACCCCCATGAGCGCTTTAGTCTTGTCTTTAA AAACCTTAGAAGACAACCAACAACACCGCCGCATTAAAATCGCTATCCAGCGCATGAGTTTTTTATACCGCTCGCTCTCG TATTTAGTGATGCAAGATATTGAGCGCGAATCTTTTGTGCTTTTAGATTTAAAAGCCCTGATTATTAAAGAAAACACGCT TTTTAGCGAGATGATAGACTACCACAAGCTGGAATTTAAAAGCGATTTAGTGGAAGTGGAACTTAAAGCTAAAGAGCAGG ATTTCATTTCGCTTTATAGCAATTTGCTCATGAACGCGATCAAATACAGCGTCATGAATGGGTATATCCACATAGAGCTA ACGCATGCGTTTTTGAAAGTGAAAAATTTAGGGTATGAAATCCCTAAAGACAAGATCACAGAATTAAGCGTTCGTTATGT GCGTTTCAATTCTGGCGTGTTGGGTTATGGTATAGGGTTAGGTTTGGTGAAAAAAGTGTGCGAAAAGTATAAAATGCGTT TAGAAATTCATAGCGAACCCTCTTTAAAGGGATCGTTTTATGAAAATTCGTTTTGCGTTCAATTTCAAGGATAA
Upstream 100 bases:
>100_bases AACCTATGGGAGCAAGCGATTGATGATTCCACCTTGCGCACTTATATTAAAGTGTTGCGCAAGCTTTTGGGTAAAAATTG CATAGAAACGCATAAGGGGG
Downstream 100 bases:
>100_bases AGATGCTTTCAGTGTATGAAAAAGTGAATGCTCTAGACAAAAGGGCGATTGAAGAATTGTTTTTAAGCGAAGACATTTTA ATGGAAAACGCCGCTATGGC
Product: histidine kinase sensor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MAIALTHYEKKSLKLFLGIYLGSSFVLMLVISVLAFNYEKNEKIKMIRMDMDKMASKIASEVIALHMQTHGDYQNALNAL ISRYKDASIALFDSKKRVLYSNIPESANLIKNHKEAGFFSFRGEYYLLSDETFAHLGVAKMLFKNSKPLHFSSLYRNIVL VFVVAFLCVIGVSVFLGRLFLKPIRNEITRIDHFLKNTTHELNTPMSALVLSLKTLEDNQQHRRIKIAIQRMSFLYRSLS YLVMQDIERESFVLLDLKALIIKENTLFSEMIDYHKLEFKSDLVEVELKAKEQDFISLYSNLLMNAIKYSVMNGYIHIEL THAFLKVKNLGYEIPKDKITELSVRYVRFNSGVLGYGIGLGLVKKVCEKYKMRLEIHSEPSLKGSFYENSFCVQFQG
Sequences:
>Translated_397_residues MAIALTHYEKKSLKLFLGIYLGSSFVLMLVISVLAFNYEKNEKIKMIRMDMDKMASKIASEVIALHMQTHGDYQNALNAL ISRYKDASIALFDSKKRVLYSNIPESANLIKNHKEAGFFSFRGEYYLLSDETFAHLGVAKMLFKNSKPLHFSSLYRNIVL VFVVAFLCVIGVSVFLGRLFLKPIRNEITRIDHFLKNTTHELNTPMSALVLSLKTLEDNQQHRRIKIAIQRMSFLYRSLS YLVMQDIERESFVLLDLKALIIKENTLFSEMIDYHKLEFKSDLVEVELKAKEQDFISLYSNLLMNAIKYSVMNGYIHIEL THAFLKVKNLGYEIPKDKITELSVRYVRFNSGVLGYGIGLGLVKKVCEKYKMRLEIHSEPSLKGSFYENSFCVQFQG >Mature_396_residues AIALTHYEKKSLKLFLGIYLGSSFVLMLVISVLAFNYEKNEKIKMIRMDMDKMASKIASEVIALHMQTHGDYQNALNALI SRYKDASIALFDSKKRVLYSNIPESANLIKNHKEAGFFSFRGEYYLLSDETFAHLGVAKMLFKNSKPLHFSSLYRNIVLV FVVAFLCVIGVSVFLGRLFLKPIRNEITRIDHFLKNTTHELNTPMSALVLSLKTLEDNQQHRRIKIAIQRMSFLYRSLSY LVMQDIERESFVLLDLKALIIKENTLFSEMIDYHKLEFKSDLVEVELKAKEQDFISLYSNLLMNAIKYSVMNGYIHIELT HAFLKVKNLGYEIPKDKITELSVRYVRFNSGVLGYGIGLGLVKKVCEKYKMRLEIHSEPSLKGSFYENSFCVQFQG
Specific function: Member of the two-component regulatory system dltS/dltR. Regulates the expression of the dlt operon. Probably phosphorylates dltR [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 45853; Mature: 45721
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIALTHYEKKSLKLFLGIYLGSSFVLMLVISVLAFNYEKNEKIKMIRMDMDKMASKIAS CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHH EVIALHMQTHGDYQNALNALISRYKDASIALFDSKKRVLYSNIPESANLIKNHKEAGFFS HHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHCCCCCCHHHHHHCCCCCCEEE FRGEYYLLSDETFAHLGVAKMLFKNSKPLHFSSLYRNIVLVFVVAFLCVIGVSVFLGRLF ECCCEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKPIRNEITRIDHFLKNTTHELNTPMSALVLSLKTLEDNQQHRRIKIAIQRMSFLYRSLS HHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH YLVMQDIERESFVLLDLKALIIKENTLFSEMIDYHKLEFKSDLVEVELKAKEQDFISLYS HHHHHHCCCCCEEEEEHHHHHEECCHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHH NLLMNAIKYSVMNGYIHIELTHAFLKVKNLGYEIPKDKITELSVRYVRFNSGVLGYGIGL HHHHHHHHHHHHCCEEEEEEHHHHHHHHHCCCCCCCHHHHHHEEEEEEECCCCHHHHHHH GLVKKVCEKYKMRLEIHSEPSLKGSFYENSFCVQFQG HHHHHHHHHHHEEEEECCCCCCCCCEECCCEEEEECC >Mature Secondary Structure AIALTHYEKKSLKLFLGIYLGSSFVLMLVISVLAFNYEKNEKIKMIRMDMDKMASKIAS EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHH EVIALHMQTHGDYQNALNALISRYKDASIALFDSKKRVLYSNIPESANLIKNHKEAGFFS HHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHCCCCCCHHHHHHCCCCCCEEE FRGEYYLLSDETFAHLGVAKMLFKNSKPLHFSSLYRNIVLVFVVAFLCVIGVSVFLGRLF ECCCEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKPIRNEITRIDHFLKNTTHELNTPMSALVLSLKTLEDNQQHRRIKIAIQRMSFLYRSLS HHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH YLVMQDIERESFVLLDLKALIIKENTLFSEMIDYHKLEFKSDLVEVELKAKEQDFISLYS HHHHHHCCCCCEEEEEHHHHHEECCHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHH NLLMNAIKYSVMNGYIHIELTHAFLKVKNLGYEIPKDKITELSVRYVRFNSGVLGYGIGL HHHHHHHHHHHHCCEEEEEEHHHHHHHHHCCCCCCCHHHHHHEEEEEEECCCCHHHHHHH GLVKKVCEKYKMRLEIHSEPSLKGSFYENSFCVQFQG HHHHHHHHHHHEEEEECCCCCCCCCEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11591677; 12354221 [H]