| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645957
GI number: 15645957
Start: 1403903
End: 1404859
Strand: Reverse
Name: Not Available
Synonym: HP1344
Alternate gene names: 15645957
Gene position: 1404859-1403903 (Counterclockwise)
Preceding gene: 15645958
Following gene: 15645956
Centisome position: 84.23
GC content: 37.62
Gene sequence:
>957_bases ATGGTGAACGTGTTTTTCAAACAGCAAAAATTTGTCATTAAAAAACGCTTTAATGACTTTAATGGTTTTGATATAGAAGA AAATGAAGTGTTGTGGTTTGAATTAATCAACCCCACGCCCAATGAATTAGCCACTCTAAGCCAAGAATATGCTATCCACT ACAACACAGACCATTCCCAACGAGTCTCATCAGTTACCAAATATTGGGAAGACAGCTCCAGCGTTACGATCAACGCTTTT TTCACCAACCAGGATGAAAATGAGACTTTCCACACGGAAATGGCGACCTTTATTTTGTCTAATAACATTCTTTTCACGAT CTATTATGGGACTTTAGAAATCTTTGATTCTATCCAAAAAAAGGTTTTGGCTAGCCCTAAAAAATTTGAAGACGGGTTTG ATATTCTAACTAAAATCTTTGAAGTGTATTTTGAAAAAGGCGTAGAATGCCTAGAGTGGATCAACAAACAAACGAGCCTG TTGCGCAAAAACATCATTTTCAAAGAAACTTCTACGCATGATGATATTTTAGTGCGCTTGTCCAATTTGCAAGAATTTAA TGTGACTTTAAGGGATTCTTTTTTTGACAAACGGCGCATTATCACCGCTTTATTAAGGAGCAATAAAGTGGATAGCGATA CCAAAAATAATTTAAATATCATTTTAACCGATTTTAGCTCTTTAGTGGAGTCCACAACGGTCAATCTCAACTCCCTAGAC AACATTCAAAACCTGTTCGCTTCTCAAGTCAATGTGGAGCAAAATAAAATCATCAAGCTCTTCACGGTGGCGACCATGGC GATGATGCCTCCCACTTTGATTGGCACGATTTATGGCATGAATTTTAAATTCATGCCGGAGTTAGAATGGCAATACGGGT ATCTTTTCGCGCTGATTGTCATGGCGATTTCTACGATCCTCCCGGTGATTTATTTTAAAAAGAAAGGCTGGTTGTAG
Upstream 100 bases:
>100_bases TATCTCTACCGGTGGGGGAGCGAGTTTGGAATTGTTAGAGGGCAAAATTTTACCTTGTTTTGAGGTTTTGGACAAACGCC ATTAACTCTAAGGATCGCTT
Downstream 100 bases:
>100_bases CCTTTCATGGAATTTTTATCCTCACTCTTAGACGCTCTTTCTACAACGCATGGCATAGTCTCCTTGGCTACGCTCACGCT TTTAGAAATCATTTTAGGGA
Product: magnesium and cobalt transport protein (corA)
Products: Ni2; [Cytoplasm]; Co; 2 [Cytoplasm]; Mg (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MVNVFFKQQKFVIKKRFNDFNGFDIEENEVLWFELINPTPNELATLSQEYAIHYNTDHSQRVSSVTKYWEDSSSVTINAF FTNQDENETFHTEMATFILSNNILFTIYYGTLEIFDSIQKKVLASPKKFEDGFDILTKIFEVYFEKGVECLEWINKQTSL LRKNIIFKETSTHDDILVRLSNLQEFNVTLRDSFFDKRRIITALLRSNKVDSDTKNNLNIILTDFSSLVESTTVNLNSLD NIQNLFASQVNVEQNKIIKLFTVATMAMMPPTLIGTIYGMNFKFMPELEWQYGYLFALIVMAISTILPVIYFKKKGWL
Sequences:
>Translated_318_residues MVNVFFKQQKFVIKKRFNDFNGFDIEENEVLWFELINPTPNELATLSQEYAIHYNTDHSQRVSSVTKYWEDSSSVTINAF FTNQDENETFHTEMATFILSNNILFTIYYGTLEIFDSIQKKVLASPKKFEDGFDILTKIFEVYFEKGVECLEWINKQTSL LRKNIIFKETSTHDDILVRLSNLQEFNVTLRDSFFDKRRIITALLRSNKVDSDTKNNLNIILTDFSSLVESTTVNLNSLD NIQNLFASQVNVEQNKIIKLFTVATMAMMPPTLIGTIYGMNFKFMPELEWQYGYLFALIVMAISTILPVIYFKKKGWL >Mature_318_residues MVNVFFKQQKFVIKKRFNDFNGFDIEENEVLWFELINPTPNELATLSQEYAIHYNTDHSQRVSSVTKYWEDSSSVTINAF FTNQDENETFHTEMATFILSNNILFTIYYGTLEIFDSIQKKVLASPKKFEDGFDILTKIFEVYFEKGVECLEWINKQTSL LRKNIIFKETSTHDDILVRLSNLQEFNVTLRDSFFDKRRIITALLRSNKVDSDTKNNLNIILTDFSSLVESTTVNLNSLD NIQNLFASQVNVEQNKIIKLFTVATMAMMPPTLIGTIYGMNFKFMPELEWQYGYLFALIVMAISTILPVIYFKKKGWL
Specific function: Mediates influx of magnesium ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
Organism=Escherichia coli, GI2367297, Length=307, Percent_Identity=26.0586319218241, Blast_Score=136, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 37136; Mature: 37136
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNVFFKQQKFVIKKRFNDFNGFDIEENEVLWFELINPTPNELATLSQEYAIHYNTDHSQ CCCEEEHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHEEEEECCCHHH RVSSVTKYWEDSSSVTINAFFTNQDENETFHTEMATFILSNNILFTIYYGTLEIFDSIQK HHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHH KVLASPKKFEDGFDILTKIFEVYFEKGVECLEWINKQTSLLRKNIIFKETSTHDDILVRL HHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHH SNLQEFNVTLRDSFFDKRRIITALLRSNKVDSDTKNNLNIILTDFSSLVESTTVNLNSLD HCCHHHCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECHHHHHHHHCCCCHHHH NIQNLFASQVNVEQNKIIKLFTVATMAMMPPTLIGTIYGMNFKFMPELEWQYGYLFALIV HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEECCCCCCHHHHHHHHHH MAISTILPVIYFKKKGWL HHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVNVFFKQQKFVIKKRFNDFNGFDIEENEVLWFELINPTPNELATLSQEYAIHYNTDHSQ CCCEEEHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHEEEEECCCHHH RVSSVTKYWEDSSSVTINAFFTNQDENETFHTEMATFILSNNILFTIYYGTLEIFDSIQK HHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHH KVLASPKKFEDGFDILTKIFEVYFEKGVECLEWINKQTSLLRKNIIFKETSTHDDILVRL HHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHH SNLQEFNVTLRDSFFDKRRIITALLRSNKVDSDTKNNLNIILTDFSSLVESTTVNLNSLD HCCHHHCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECHHHHHHHHCCCCHHHH NIQNLFASQVNVEQNKIIKLFTVATMAMMPPTLIGTIYGMNFKFMPELEWQYGYLFALIV HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEECCCCCCHHHHHHHHHH MAISTILPVIYFKKKGWL HHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Ni2; [Periplasm]; Co; 2 [Periplasm]; Mg (II) [Periplasm] [C]
Specific reaction: Ni2+ [Periplasm] = Ni2+ [Cytoplasm] Co+2 [Periplasm] = Co+2 [Cytoplasm] Mg (II) [Periplasm] = Mg (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]