Click here to switch to the map view.

The map label for this gene is rpmC

Identifier: 15645924

GI number: 15645924

Start: 1376483

End: 1376683

Strand: Reverse

Name: rpmC

Synonym: HP1311

Alternate gene names: 15645924

Gene position: 1376683-1376483 (Counterclockwise)

Preceding gene: 15645925

Following gene: 15645923

Centisome position: 82.54

GC content: 35.82

Gene sequence:

>201_bases
ATGAAATATACTGAATTGAAAGATAAAAGTATCAAGGAATTAGAAGAGTTGTTGCATGCTAAAAAAGCGGAGCTTTTTGA
GTTGCGCGTTAAGTTAAAGGCTATGCAATTGAGTAATCCTAACGAGATTAAGAAAGCTAGAAGAAATATCGCTCGCATTA
ACACGGCCATCAATGCGCATTATTCTTCTAGCGTTGAGTAA

Upstream 100 bases:

>100_bases
GAAATGCTAGGCATTGAAGAAGGATTAGCGAGAGAAGCTTTAGCGTTAGCTCAGAGCAAACTTCCTTTTAAAACCAAAAT
TGTAACTTGTGAGAGCGAAA

Downstream 100 bases:

>100_bases
AAAGGGTAAGCAATGAATACAAAAGAGCCGCATAAAAGGCTGGTGCAAGGCAAGGTTATCAGCAAGTTTGCTGAAAAAAG
CGCTGTGATTCTTGTGGAAA

Product: 50S ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 66

Protein sequence:

>66_residues
MKYTELKDKSIKELEELLHAKKAELFELRVKLKAMQLSNPNEIKKARRNIARINTAINAHYSSSVE

Sequences:

>Translated_66_residues
MKYTELKDKSIKELEELLHAKKAELFELRVKLKAMQLSNPNEIKKARRNIARINTAINAHYSSSVE
>Mature_66_residues
MKYTELKDKSIKELEELLHAKKAELFELRVKLKAMQLSNPNEIKKARRNIARINTAINAHYSSSVE

Specific function: Unknown

COG id: COG0255

COG function: function code J; Ribosomal protein L29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001854
- InterPro:   IPR018254 [H]

Pfam domain/function: PF00831 Ribosomal_L29 [H]

EC number: NA

Molecular weight: Translated: 7683; Mature: 7683

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYTELKDKSIKELEELLHAKKAELFELRVKLKAMQLSNPNEIKKARRNIARINTAINAH
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
YSSSVE
CCCCCC
>Mature Secondary Structure
MKYTELKDKSIKELEELLHAKKAELFELRVKLKAMQLSNPNEIKKARRNIARINTAINAH
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
YSSSVE
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA