Definition Helicobacter pylori 26695, complete genome.
Accession NC_000915
Length 1,667,867

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Identifier: 15645897

GI number: 15645897

Start: 1360547

End: 1361587

Strand: Reverse

Name: Not Available

Synonym: HP1284

Alternate gene names: NA

Gene position: 1361587-1360547 (Counterclockwise)

Preceding gene: 15645898

Following gene: 15645896

Centisome position: 81.64

GC content: 40.54

Gene sequence:

>1041_bases
ATGGATTTTATAGGGTTTGAAGATTTAAAATGCAAAGATAAAGAAAACTCTCAAAAAGTTTTTGTGATCCGTAACGATAA
GTTAGGCGATTTTATTTTAGCCATACCCGCTTTAATCGCTCTAAAGCATGCTTTTTTAGAAAAAGGCAAGGAAGTGTATT
TGGGCGTGGTTGTACCTAGCTATACCACCCCAATCGCTTTAGAATTCCCTTTCATTGATGAAGTCATTATAGAAGACAAC
CATTTGAGCGCCACTCTCAAAAGTAAACCCATTGACGCTCTTATCTTTTTATTTTCTAATTTTAAAAACGCCAGACTCGC
TTTTAGTTTGAGGAAATCCATTCCTTATATCCTAGCCCCAAAGACTAAAATCTATTCTTGGCTTTATCAAAAGAGCGTGC
GCCAAAGCCGATCGCTGTGTTTAAAAACCGAATACGAATACAATTTGGACTTAATCCATGCGTTTTGTAAAGATCACAAC
CTCCCTAACGCCCAACTTAAAAAAATCGCATGGAAACTTAAAGACAAATCCAAAGAGCGATCCATCATCGCTTCAAAACT
CAACGCTGATGTTGGTTTGTTGTGGATTGGCGTGCATATGCATAGCGGAGGCAGTTCGCCCGTATTGCCTGCCTCACACT
TTATCAAACTGATTGATTGTTTACACAACAATTTAAGTTGTGAGATCATTCTTATTTGCGGGCCAGGCGAGAGGAAAGCC
ACAGAAGAACTCCTTAAAAAAATCCCTTTCGCCCACCTCTATGATACGAGCCATAGTCTAGTGGATTTAGCCAAATTGTG
CGCGAATTTGTCCGTTTATATCGGGAACGCTTCAGGCCCTTTGCATGTGAACGCTTTGTTTGACAACCAATCTATCGGGT
TTTATCCTAACGAACTCAGCGCCTCTATTGCCAGATGGCGGCCTTTCAATGAGCGTTTTTTAGGCATCACCCCGCCTAAT
GGCTCAAACGATATGGGTTTGATTGACATTGAAAAAGAGGGTGAAAAGATTGTGGGTTTTATCAATTACCGCAAGATGTA
G

Upstream 100 bases:

>100_bases
GCCCATAAAAGCATGGCAGAATAAAAAATAAAATTTATCCATCGCATAAGAACGATTTTTGCTAAAACATGACAAAAAAT
TTGATCTCTTAGGCGGAGTT

Downstream 100 bases:

>100_bases
ATTTGATAAGAGACTTTCTACTATAATCACACATTCGTTTATTCTTAATGTTTGCGTGGATTTTACATTGTTGAACACTA
AAAAATAGGAGCTGTTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MDFIGFEDLKCKDKENSQKVFVIRNDKLGDFILAIPALIALKHAFLEKGKEVYLGVVVPSYTTPIALEFPFIDEVIIEDN
HLSATLKSKPIDALIFLFSNFKNARLAFSLRKSIPYILAPKTKIYSWLYQKSVRQSRSLCLKTEYEYNLDLIHAFCKDHN
LPNAQLKKIAWKLKDKSKERSIIASKLNADVGLLWIGVHMHSGGSSPVLPASHFIKLIDCLHNNLSCEIILICGPGERKA
TEELLKKIPFAHLYDTSHSLVDLAKLCANLSVYIGNASGPLHVNALFDNQSIGFYPNELSASIARWRPFNERFLGITPPN
GSNDMGLIDIEKEGEKIVGFINYRKM

Sequences:

>Translated_346_residues
MDFIGFEDLKCKDKENSQKVFVIRNDKLGDFILAIPALIALKHAFLEKGKEVYLGVVVPSYTTPIALEFPFIDEVIIEDN
HLSATLKSKPIDALIFLFSNFKNARLAFSLRKSIPYILAPKTKIYSWLYQKSVRQSRSLCLKTEYEYNLDLIHAFCKDHN
LPNAQLKKIAWKLKDKSKERSIIASKLNADVGLLWIGVHMHSGGSSPVLPASHFIKLIDCLHNNLSCEIILICGPGERKA
TEELLKKIPFAHLYDTSHSLVDLAKLCANLSVYIGNASGPLHVNALFDNQSIGFYPNELSASIARWRPFNERFLGITPPN
GSNDMGLIDIEKEGEKIVGFINYRKM
>Mature_346_residues
MDFIGFEDLKCKDKENSQKVFVIRNDKLGDFILAIPALIALKHAFLEKGKEVYLGVVVPSYTTPIALEFPFIDEVIIEDN
HLSATLKSKPIDALIFLFSNFKNARLAFSLRKSIPYILAPKTKIYSWLYQKSVRQSRSLCLKTEYEYNLDLIHAFCKDHN
LPNAQLKKIAWKLKDKSKERSIIASKLNADVGLLWIGVHMHSGGSSPVLPASHFIKLIDCLHNNLSCEIILICGPGERKA
TEELLKKIPFAHLYDTSHSLVDLAKLCANLSVYIGNASGPLHVNALFDNQSIGFYPNELSASIARWRPFNERFLGITPPN
GSNDMGLIDIEKEGEKIVGFINYRKM

Specific function: Unknown

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: NA

Molecular weight: Translated: 39008; Mature: 39008

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFIGFEDLKCKDKENSQKVFVIRNDKLGDFILAIPALIALKHAFLEKGKEVYLGVVVPS
CCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECC
YTTPIALEFPFIDEVIIEDNHLSATLKSKPIDALIFLFSNFKNARLAFSLRKSIPYILAP
CCCCEEEECCCCCEEEEECCCCEEEECCCCHHHHHHHHHCCCCCEEEEEHHHCCCEEECC
KTKIYSWLYQKSVRQSRSLCLKTEYEYNLDLIHAFCKDHNLPNAQLKKIAWKLKDKSKER
HHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHH
SIIASKLNADVGLLWIGVHMHSGGSSPVLPASHFIKLIDCLHNNLSCEIILICGPGERKA
HHHHHHHCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCHH
TEELLKKIPFAHLYDTSHSLVDLAKLCANLSVYIGNASGPLHVNALFDNQSIGFYPNELS
HHHHHHHCCCEEEECCCHHHHHHHHHHCCEEEEEECCCCCEEEEEEECCCCCCCCCCHHH
ASIARWRPFNERFLGITPPNGSNDMGLIDIEKEGEKIVGFINYRKM
HHHHHCCCCCCCEEEEECCCCCCCCEEEEECCCCCEEEEEEEEECC
>Mature Secondary Structure
MDFIGFEDLKCKDKENSQKVFVIRNDKLGDFILAIPALIALKHAFLEKGKEVYLGVVVPS
CCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECC
YTTPIALEFPFIDEVIIEDNHLSATLKSKPIDALIFLFSNFKNARLAFSLRKSIPYILAP
CCCCEEEECCCCCEEEEECCCCEEEECCCCHHHHHHHHHCCCCCEEEEEHHHCCCEEECC
KTKIYSWLYQKSVRQSRSLCLKTEYEYNLDLIHAFCKDHNLPNAQLKKIAWKLKDKSKER
HHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHH
SIIASKLNADVGLLWIGVHMHSGGSSPVLPASHFIKLIDCLHNNLSCEIILICGPGERKA
HHHHHHHCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCHH
TEELLKKIPFAHLYDTSHSLVDLAKLCANLSVYIGNASGPLHVNALFDNQSIGFYPNELS
HHHHHHHCCCEEEECCCHHHHHHHHHHCCEEEEEECCCCCEEEEEEECCCCCCCCCCHHH
ASIARWRPFNERFLGITPPNGSNDMGLIDIEKEGEKIVGFINYRKM
HHHHHCCCCCCCEEEEECCCCCCCCEEEEECCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]