| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645760
GI number: 15645760
Start: 1210202
End: 1210711
Strand: Reverse
Name: Not Available
Synonym: HP1146
Alternate gene names: NA
Gene position: 1210711-1210202 (Counterclockwise)
Preceding gene: 15645761
Following gene: 15645759
Centisome position: 72.59
GC content: 36.08
Gene sequence:
>510_bases ATGAGAACAGAACCTTTATTTTATTTTAAAAAACAAGGCATGTTTAAATCCCCATGCTATACTTATGGCAAAATTCATAT TTTGGGAGAAAGCATGGAAAAAACTGAAACCACGATTTTTGTGGATTGGGAAAATCTTCTCGCCGATTTGAAAGCAATCC AAGAAACGGATGAGCGTTTAAAAGAGCCTAATTTTAATTTCAACAACCCCGAGCAACTCTTAGTGCTAATCCGTTCGTTT TTGGAGCCTGAAGAGGAATTGAAGCGGATCTATTTTTATGTATCTGAGCCTTTCACAGAAGTTGAACCTAGAATCAAAGG CAATAAAAACGAAGAACTTGAGGAGTATAAAGAGAAGAATCCTAAAGATTATGAGGAAAGAGTGAATAAATCAGGGATTA TCCAATCTTTCAACCACAATATCGCCCAACAAAATCAAGTGAAATTACGAGTCGGTCGGGTAATGTTCAAATTCACAAAT GAGTCTGAAGACAAAGAAGTCTTGATCTAG
Upstream 100 bases:
>100_bases ACATTAAAGCACGAAATATCCCCTCATATTCTCAAGAAAGTTTTACTATAAAGTTTTTAAAAAATGAAAGAAATTAATTA AGGCTTTGAGTGTCTGTTTG
Downstream 100 bases:
>100_bases AAGCCGAAATTCTCATACCGCACTTAGAATTGCGTCAAAAACAAATTGATGCGCTGTTGGTGCACGATATTACCAAGCTA TGTTACACCAAACCACTAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MRTEPLFYFKKQGMFKSPCYTYGKIHILGESMEKTETTIFVDWENLLADLKAIQETDERLKEPNFNFNNPEQLLVLIRSF LEPEEELKRIYFYVSEPFTEVEPRIKGNKNEELEEYKEKNPKDYEERVNKSGIIQSFNHNIAQQNQVKLRVGRVMFKFTN ESEDKEVLI
Sequences:
>Translated_169_residues MRTEPLFYFKKQGMFKSPCYTYGKIHILGESMEKTETTIFVDWENLLADLKAIQETDERLKEPNFNFNNPEQLLVLIRSF LEPEEELKRIYFYVSEPFTEVEPRIKGNKNEELEEYKEKNPKDYEERVNKSGIIQSFNHNIAQQNQVKLRVGRVMFKFTN ESEDKEVLI >Mature_169_residues MRTEPLFYFKKQGMFKSPCYTYGKIHILGESMEKTETTIFVDWENLLADLKAIQETDERLKEPNFNFNNPEQLLVLIRSF LEPEEELKRIYFYVSEPFTEVEPRIKGNKNEELEEYKEKNPKDYEERVNKSGIIQSFNHNIAQQNQVKLRVGRVMFKFTN ESEDKEVLI
Specific function: Unknown
COG id: COG1432
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20228; Mature: 20228
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTEPLFYFKKQGMFKSPCYTYGKIHILGESMEKTETTIFVDWENLLADLKAIQETDERL CCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHH KEPNFNFNNPEQLLVLIRSFLEPEEELKRIYFYVSEPFTEVEPRIKGNKNEELEEYKEKN HCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHCC PKDYEERVNKSGIIQSFNHNIAQQNQVKLRVGRVMFKFTNESEDKEVLI CCCHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHEEEEECCCCCCCCCCC >Mature Secondary Structure MRTEPLFYFKKQGMFKSPCYTYGKIHILGESMEKTETTIFVDWENLLADLKAIQETDERL CCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHH KEPNFNFNNPEQLLVLIRSFLEPEEELKRIYFYVSEPFTEVEPRIKGNKNEELEEYKEKN HCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHCC PKDYEERVNKSGIIQSFNHNIAQQNQVKLRVGRVMFKFTNESEDKEVLI CCCHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA