| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645746
GI number: 15645746
Start: 1194273
End: 1195682
Strand: Reverse
Name: Not Available
Synonym: HP1132
Alternate gene names: 15645746
Gene position: 1195682-1194273 (Counterclockwise)
Preceding gene: 15645747
Following gene: 15645745
Centisome position: 71.69
GC content: 45.11
Gene sequence:
>1410_bases ATGAAAGCGATGGAAGGTAAAATCATTCAGGTTTTAGGCCCTGTGGTAGATGTGGAGTTTGAATCCTATCTGCCGGCGAT TTTTGAAGCGTTAGACATTAATTTTGAAGTCAATGGTGTTCAAAAGTCTTTAGTTTTAGAGGTGGCAGCCCATTTGGGCG GTAATCGGGTGCGAGCGATTGCTATGGATATGACAGAAGGCTTAGTGCGTAACCAAGTGATCAAGGCTCGCGGCAAAATG ATTGAAGTGCCTGTGGGCGAAGAAGTATTAGGGCGTATTTTTAATGTTGTGGGCGAGAGCATTGACAATTTAGAGCCGCT TAAGCCGTCCTTAACTTGGCCCATTCACAGAAAAGCCCCTAGTTTTGAGCAGCAAAGCACTAAAACAGAAATGTTTGAAA CTGGTATTAAAGTCATTGACTTACTCGCGCCTTATTCTAAGGGCGGTAAAGTAGGCTTGTTTGGTGGGGCTGGCGTAGGC AAAACGGTGATCATTATGGAGCTTATCCATAATGTGGCTTATAAGCATAACGGGTATTCGGTGTTTGCAGGTGTGGGGGA GCGCACCAGAGAGGGGAATGATCTGTATTTTGAAATGAAAGAAGGGGGCGTTTTAGACAAAGTCGCACTGTGTTATGGGC AAATGAATGAGCCACCAGGCGCGAGGAACCGCATCGCATTCACCGGCTTGACGATGGCGGAGTATTTTCGTGATGAAAAG GGCTTAGATGTGTTGATGTTTATTGACAACATCTTTAGATACGCTCAAAGCGGTGCGGAAATGAGCGCGCTATTAGGCCG TATCCCTTCAGCGGTGGGGTATCAGCCCACGCTAGCCGGGGAAATGGGGAAACTTCAAGAGCGTATCGCTTCCACTAAAA ATGGCTCTATCACTTCCGTTCAAGCGGTGTATGTGCCAGCAGATGACTTGACTGACCCAGCCCCTGCTTCGGTGTTTGCG CATTTGGATGCGACTACGGTGTTGAATAGAAAGATCGCTGAAAAAGGGATTTATCCGGCGGTGGATCCTTTGGATTCCAC TTCAAGGATTTTAAGCCCTCAAATGATCGGTGAGAAACACTATGAAGTCGCTACCGGTATCCAGCAGGTTTTACAAAAAT ACAAGGATTTGCAAGACATTATTGCGATTTTGGGATTAGACGAATTGAGCGAAGAGGATAAAAAAACGGTTGAAAGGGCC AGAAAAATTGAGAAGTTTTTATCCCAGCCGTTCTTTGTGGCTGAAGTGTTTACAGGAAGTCCTGGTAAATATGTAACCCT TCAAGAGACTTTAGAGGGCTTTGGAGGGATTTTAGAGGGCAAATACGATCATATTCCCGAGAACGCGTTTTATATGGTGG GTAGCATTCAAGAGGTTTTAGAAAAAGCTAAAAACATGAAAAATTCCTAA
Upstream 100 bases:
>100_bases TCTTATAATAAAGCCAGACAAGAGGCGATTACGACTGAGCTAGTAGAAATCAATGCTGGCGTAGAAGCCCTAAAATAAAA ATTATATTAATCAAGGAGCG
Downstream 100 bases:
>100_bases GGGTTTTGTGATGGCTTTGTTGAAAATTAGTGTGGTAGTTCCTGAGGGGGAAGTCTATACAGGAGAGGTTAAAAGCGTTG TGTTGCCAGGAGTTGAAGGG
Product: F0F1 ATP synthase subunit beta
Products: NA
Alternate protein names: ATP synthase F1 sector subunit beta; F-ATPase subunit beta [H]
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MKAMEGKIIQVLGPVVDVEFESYLPAIFEALDINFEVNGVQKSLVLEVAAHLGGNRVRAIAMDMTEGLVRNQVIKARGKM IEVPVGEEVLGRIFNVVGESIDNLEPLKPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVG KTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEK GLDVLMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLAGEMGKLQERIASTKNGSITSVQAVYVPADDLTDPAPASVFA HLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEVATGIQQVLQKYKDLQDIIAILGLDELSEEDKKTVERA RKIEKFLSQPFFVAEVFTGSPGKYVTLQETLEGFGGILEGKYDHIPENAFYMVGSIQEVLEKAKNMKNS
Sequences:
>Translated_469_residues MKAMEGKIIQVLGPVVDVEFESYLPAIFEALDINFEVNGVQKSLVLEVAAHLGGNRVRAIAMDMTEGLVRNQVIKARGKM IEVPVGEEVLGRIFNVVGESIDNLEPLKPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVG KTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEK GLDVLMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLAGEMGKLQERIASTKNGSITSVQAVYVPADDLTDPAPASVFA HLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEVATGIQQVLQKYKDLQDIIAILGLDELSEEDKKTVERA RKIEKFLSQPFFVAEVFTGSPGKYVTLQETLEGFGGILEGKYDHIPENAFYMVGSIQEVLEKAKNMKNS >Mature_469_residues MKAMEGKIIQVLGPVVDVEFESYLPAIFEALDINFEVNGVQKSLVLEVAAHLGGNRVRAIAMDMTEGLVRNQVIKARGKM IEVPVGEEVLGRIFNVVGESIDNLEPLKPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVG KTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEK GLDVLMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLAGEMGKLQERIASTKNGSITSVQAVYVPADDLTDPAPASVFA HLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEVATGIQQVLQKYKDLQDIIAILGLDELSEEDKKTVERA RKIEKFLSQPFFVAEVFTGSPGKYVTLQETLEGFGGILEGKYDHIPENAFYMVGSIQEVLEKAKNMKNS
Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits [H]
COG id: COG0055
COG function: function code C; F0F1-type ATP synthase, beta subunit
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATPase alpha/beta chains family [H]
Homologues:
Organism=Homo sapiens, GI32189394, Length=470, Percent_Identity=67.6595744680851, Blast_Score=642, Evalue=0.0, Organism=Homo sapiens, GI19913424, Length=319, Percent_Identity=29.4670846394984, Blast_Score=132, Evalue=6e-31, Organism=Homo sapiens, GI19913426, Length=434, Percent_Identity=25.3456221198157, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI19913428, Length=432, Percent_Identity=24.7685185185185, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI50345984, Length=348, Percent_Identity=25.5747126436782, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI4757810, Length=348, Percent_Identity=25.5747126436782, Blast_Score=111, Evalue=2e-24, Organism=Escherichia coli, GI1790170, Length=462, Percent_Identity=66.4502164502164, Blast_Score=623, Evalue=1e-180, Organism=Escherichia coli, GI1788251, Length=387, Percent_Identity=27.6485788113695, Blast_Score=125, Evalue=7e-30, Organism=Escherichia coli, GI1790172, Length=388, Percent_Identity=24.4845360824742, Blast_Score=115, Evalue=4e-27, Organism=Caenorhabditis elegans, GI25144756, Length=467, Percent_Identity=66.1670235546039, Blast_Score=630, Evalue=0.0, Organism=Caenorhabditis elegans, GI17565854, Length=319, Percent_Identity=30.7210031347962, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI17570191, Length=422, Percent_Identity=25.1184834123223, Blast_Score=125, Evalue=5e-29, Organism=Caenorhabditis elegans, GI17510931, Length=348, Percent_Identity=26.7241379310345, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI71988080, Length=352, Percent_Identity=24.7159090909091, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI71988063, Length=352, Percent_Identity=24.7159090909091, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI71988074, Length=329, Percent_Identity=24.0121580547112, Blast_Score=87, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6322581, Length=463, Percent_Identity=67.8185745140389, Blast_Score=634, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6319603, Length=421, Percent_Identity=27.0783847980998, Blast_Score=129, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6319370, Length=401, Percent_Identity=24.4389027431421, Blast_Score=109, Evalue=9e-25, Organism=Saccharomyces cerevisiae, GI6320016, Length=260, Percent_Identity=26.1538461538462, Blast_Score=88, Evalue=3e-18, Organism=Drosophila melanogaster, GI24638766, Length=467, Percent_Identity=68.7366167023555, Blast_Score=644, Evalue=0.0, Organism=Drosophila melanogaster, GI28574560, Length=474, Percent_Identity=63.5021097046413, Blast_Score=593, Evalue=1e-170, Organism=Drosophila melanogaster, GI24583992, Length=394, Percent_Identity=27.9187817258883, Blast_Score=136, Evalue=4e-32, Organism=Drosophila melanogaster, GI24583988, Length=394, Percent_Identity=27.6649746192893, Blast_Score=133, Evalue=2e-31, Organism=Drosophila melanogaster, GI24583986, Length=394, Percent_Identity=27.6649746192893, Blast_Score=133, Evalue=2e-31, Organism=Drosophila melanogaster, GI24583984, Length=394, Percent_Identity=27.6649746192893, Blast_Score=133, Evalue=2e-31, Organism=Drosophila melanogaster, GI20129479, Length=335, Percent_Identity=28.6567164179104, Blast_Score=132, Evalue=4e-31, Organism=Drosophila melanogaster, GI281361666, Length=419, Percent_Identity=25.5369928400955, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI24646341, Length=419, Percent_Identity=25.5369928400955, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI17136796, Length=419, Percent_Identity=25.5369928400955, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI24658560, Length=428, Percent_Identity=23.3644859813084, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24638768, Length=95, Percent_Identity=55.7894736842105, Blast_Score=95, Evalue=1e-19,
Paralogues:
None
Copy number: 10836 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020003 - InterPro: IPR000194 - InterPro: IPR003593 - InterPro: IPR005722 - InterPro: IPR018118 - InterPro: IPR000793 - InterPro: IPR004100 [H]
Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N [H]
EC number: =3.6.3.14 [H]
Molecular weight: Translated: 51479; Mature: 51479
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS00152 ATPASE_ALPHA_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAMEGKIIQVLGPVVDVEFESYLPAIFEALDINFEVNGVQKSLVLEVAAHLGGNRVRAI CCCCCCHHHHHHCCHHCCCHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHCCCCEEEEE AMDMTEGLVRNQVIKARGKMIEVPVGEEVLGRIFNVVGESIDNLEPLKPSLTWPIHRKAP EHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC SFEQQSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAYKHNGYS CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEE VFAGVGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEK EEECCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHCCCC GLDVLMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLAGEMGKLQERIASTKNGSITSV CCEEHHHHHHHHHHHHCCHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEE QAVYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKH EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHCCHH YEVATGIQQVLQKYKDLQDIIAILGLDELSEEDKKTVERARKIEKFLSQPFFVAEVFTGS HHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHHHHCCCEEEEEEEECC PGKYVTLQETLEGFGGILEGKYDHIPENAFYMVGSIQEVLEKAKNMKNS CCCEEEHHHHHHHHCCCCCCCHHCCCCCCEEHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKAMEGKIIQVLGPVVDVEFESYLPAIFEALDINFEVNGVQKSLVLEVAAHLGGNRVRAI CCCCCCHHHHHHCCHHCCCHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHCCCCEEEEE AMDMTEGLVRNQVIKARGKMIEVPVGEEVLGRIFNVVGESIDNLEPLKPSLTWPIHRKAP EHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC SFEQQSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAYKHNGYS CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEE VFAGVGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEK EEECCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHCCCC GLDVLMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLAGEMGKLQERIASTKNGSITSV CCEEHHHHHHHHHHHHCCHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEE QAVYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKH EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHCCHH YEVATGIQQVLQKYKDLQDIIAILGLDELSEEDKKTVERARKIEKFLSQPFFVAEVFTGS HHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHHHHCCCEEEEEEEECC PGKYVTLQETLEGFGGILEGKYDHIPENAFYMVGSIQEVLEKAKNMKNS CCCEEEHHHHHHHHCCCCCCCHHCCCCCCEEHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA