| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645741
GI number: 15645741
Start: 1192013
End: 1192594
Strand: Reverse
Name: Not Available
Synonym: HP1127
Alternate gene names: NA
Gene position: 1192594-1192013 (Counterclockwise)
Preceding gene: 15645742
Following gene: 15645740
Centisome position: 71.5
GC content: 34.19
Gene sequence:
>582_bases ATGCCAACTGATAAGGAGGGCGATTTTATTGATCCTAAAGAACAAGAAGAAAGCCTTGAAAATATTTTTTCTTCACTCAA TGATTTTCAAGAAAAGACAGACGCAAACGCTCAAAAAAATGAGCAAAAAAATGAGCAAGAAGAAGAGCAAAGGCGTTTAA AAGAACAGCAACGCTTAAGAAAAAACCAAAAAAATCAAGAGATGTTGAAAGGTTTGCAACAAAATTTGAATCAATTCGCG CAAAAATTAGAAAGCGTTAAAAACAAGACTTTAGATTTGCAAATCCCTAAACAAGATGGGGTTGATGAAAAAGCCTATCA AGAGTGGTATGCTCAAATCTATCAGATTTTATATAAAGGTTGGAAAGGGGTTTTTTACCACAAGGCTTCAGTGAGTGCAC TGATTATGATCGCTAAAGATGGAGAGTTTGATTATACCATTCTTAGCTACTCTGATTTTAAGGATTATAACAAGAGTGTG ATGACCCTTTTAAATGATTTAAAGAAAGTGGATTTTCCCCCATATCCTGGAGGAAGCATGATTTCTATTCAAGTTAATTT CACCACTAAGGAAGAACAATGA
Upstream 100 bases:
>100_bases ATTGATTTGAATTTAGAAGATTTGCCAAGCGATGAAAAAAAAGATGAAAAAATCGCTGAAAAAGCAGAAGAAAAAAAAGA TGAAAAAGTAGTTGAAAAAA
Downstream 100 bases:
>100_bases GGTATTTATGGCTTTTTTTAATACACACTATAGGGCTTTTTGCAACAGATAAAACACTAGATATTATTAAAACCATTCAA AAACTTCCTAAGATTGAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MPTDKEGDFIDPKEQEESLENIFSSLNDFQEKTDANAQKNEQKNEQEEEQRRLKEQQRLRKNQKNQEMLKGLQQNLNQFA QKLESVKNKTLDLQIPKQDGVDEKAYQEWYAQIYQILYKGWKGVFYHKASVSALIMIAKDGEFDYTILSYSDFKDYNKSV MTLLNDLKKVDFPPYPGGSMISIQVNFTTKEEQ
Sequences:
>Translated_193_residues MPTDKEGDFIDPKEQEESLENIFSSLNDFQEKTDANAQKNEQKNEQEEEQRRLKEQQRLRKNQKNQEMLKGLQQNLNQFA QKLESVKNKTLDLQIPKQDGVDEKAYQEWYAQIYQILYKGWKGVFYHKASVSALIMIAKDGEFDYTILSYSDFKDYNKSV MTLLNDLKKVDFPPYPGGSMISIQVNFTTKEEQ >Mature_192_residues PTDKEGDFIDPKEQEESLENIFSSLNDFQEKTDANAQKNEQKNEQEEEQRRLKEQQRLRKNQKNQEMLKGLQQNLNQFAQ KLESVKNKTLDLQIPKQDGVDEKAYQEWYAQIYQILYKGWKGVFYHKASVSALIMIAKDGEFDYTILSYSDFKDYNKSVM TLLNDLKKVDFPPYPGGSMISIQVNFTTKEEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22698; Mature: 22566
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTDKEGDFIDPKEQEESLENIFSSLNDFQEKTDANAQKNEQKNEQEEEQRRLKEQQRLR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHH KNQKNQEMLKGLQQNLNQFAQKLESVKNKTLDLQIPKQDGVDEKAYQEWYAQIYQILYKG HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHH WKGVFYHKASVSALIMIAKDGEFDYTILSYSDFKDYNKSVMTLLNDLKKVDFPPYPGGSM HHHHHEECCCCEEEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE ISIQVNFTTKEEQ EEEEEEECCCCCC >Mature Secondary Structure PTDKEGDFIDPKEQEESLENIFSSLNDFQEKTDANAQKNEQKNEQEEEQRRLKEQQRLR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHH KNQKNQEMLKGLQQNLNQFAQKLESVKNKTLDLQIPKQDGVDEKAYQEWYAQIYQILYKG HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHH WKGVFYHKASVSALIMIAKDGEFDYTILSYSDFKDYNKSVMTLLNDLKKVDFPPYPGGSM HHHHHEECCCCEEEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE ISIQVNFTTKEEQ EEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA