| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645695
GI number: 15645695
Start: 1139469
End: 1140092
Strand: Reverse
Name: Not Available
Synonym: HP1081
Alternate gene names: NA
Gene position: 1140092-1139469 (Counterclockwise)
Preceding gene: 15645696
Following gene: 15645694
Centisome position: 68.36
GC content: 37.66
Gene sequence:
>624_bases ATGCTAAGGGTTTTAAGCGTTGGTGTTGCTTTTATTTTACTAGGGTGTCAGTTTTTCAACAAAACGACGCTGCATTTAAA ATATAAAGATTACCCCAAAAATAGCGCTTTAAAAACCGCTTTCACTTTAACCCCCCCTAAAATCTTTTTTAACGCCCGTT TTGTGCCGCCCTTTTACCAAAAAGAATTTAAAAAAGCGATCACCCAACAAATCGCTTATTTTTTAAAAGATAAAAGTGCT TTTATTCTCAATGTTTCAGGCAATGTTTTTTTTTCTTTTGAAGAGAATCCTAAAGATTTAAAAGCCATTAAAGAAAGGCT TAAAAAGACGATTGAGCCTAACGCTGACCCAAAAGCCGTCATGCGTTTTTTAAACCTTCAAGCGAGCTTGATTTTAGAAT GCGTCCCGCAAACCACTTGCCCGTTTGACACCCTTTTAATCCCCACCGCTTTCAGCGTGCCTGTTTATTACGCTAATCGT TTGGGCGATAACCCCTCTCTTTTTTCCCAAGAGGATAAAACCTATCATAACGCTTTGATCAAAGCCCTTAATAAGGCTTA CTATTCTCTTATGGAGGGTTTAGAAAAGCGTTTGAACGCTATAAAAAATGCAGAGTGGCTTTAA
Upstream 100 bases:
>100_bases AATTGAAACAAAACCGCTTGATCATTCTTATTTCGCACAACCCAAGCACGCTAAAATTAGCCACTAAGCATGTGAAATTA GAGCATGGGCGTTTGACAGA
Downstream 100 bases:
>100_bases GGCATGAAAAAGATTGCATTTTTTATTTTTGTCATTTTGTTTTCGGTAGGGATTTATTTAATTTGGCATGTTTTATTGGA AAAAGCCCTAGAATTGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MLRVLSVGVAFILLGCQFFNKTTLHLKYKDYPKNSALKTAFTLTPPKIFFNARFVPPFYQKEFKKAITQQIAYFLKDKSA FILNVSGNVFFSFEENPKDLKAIKERLKKTIEPNADPKAVMRFLNLQASLILECVPQTTCPFDTLLIPTAFSVPVYYANR LGDNPSLFSQEDKTYHNALIKALNKAYYSLMEGLEKRLNAIKNAEWL
Sequences:
>Translated_207_residues MLRVLSVGVAFILLGCQFFNKTTLHLKYKDYPKNSALKTAFTLTPPKIFFNARFVPPFYQKEFKKAITQQIAYFLKDKSA FILNVSGNVFFSFEENPKDLKAIKERLKKTIEPNADPKAVMRFLNLQASLILECVPQTTCPFDTLLIPTAFSVPVYYANR LGDNPSLFSQEDKTYHNALIKALNKAYYSLMEGLEKRLNAIKNAEWL >Mature_207_residues MLRVLSVGVAFILLGCQFFNKTTLHLKYKDYPKNSALKTAFTLTPPKIFFNARFVPPFYQKEFKKAITQQIAYFLKDKSA FILNVSGNVFFSFEENPKDLKAIKERLKKTIEPNADPKAVMRFLNLQASLILECVPQTTCPFDTLLIPTAFSVPVYYANR LGDNPSLFSQEDKTYHNALIKALNKAYYSLMEGLEKRLNAIKNAEWL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23737; Mature: 23737
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRVLSVGVAFILLGCQFFNKTTLHLKYKDYPKNSALKTAFTLTPPKIFFNARFVPPFYQ CCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEEEECCCHHEEECCCCCHHHH KEFKKAITQQIAYFLKDKSAFILNVSGNVFFSFEENPKDLKAIKERLKKTIEPNADPKAV HHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHH MRFLNLQASLILECVPQTTCPFDTLLIPTAFSVPVYYANRLGDNPSLFSQEDKTYHNALI HHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH KALNKAYYSLMEGLEKRLNAIKNAEWL HHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLRVLSVGVAFILLGCQFFNKTTLHLKYKDYPKNSALKTAFTLTPPKIFFNARFVPPFYQ CCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEEEECCCHHEEECCCCCHHHH KEFKKAITQQIAYFLKDKSAFILNVSGNVFFSFEENPKDLKAIKERLKKTIEPNADPKAV HHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHH MRFLNLQASLILECVPQTTCPFDTLLIPTAFSVPVYYANRLGDNPSLFSQEDKTYHNALI HHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH KALNKAYYSLMEGLEKRLNAIKNAEWL HHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA